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The map label for this gene is yqjI [H]

Identifier: 87200559

GI number: 87200559

Start: 2749923

End: 2750567

Strand: Reverse

Name: yqjI [H]

Synonym: Saro_2546

Alternate gene names: 87200559

Gene position: 2750567-2749923 (Counterclockwise)

Preceding gene: 87200562

Following gene: 87200558

Centisome position: 77.23

GC content: 70.23

Gene sequence:

>645_bases
ATGCATTTCGAACGTGGCCGCGACAATTGCGGCCGGAACGGCGCCGGGTTTGATCGGCGTGCCGCCAGGATGATGGCGAT
GATGGGCGGGCGCTTCGGCGGCGGTCCCTTTGGCGAAGGCGGGCCCTTCGGCGAAGGGCGTGGCTTTGGCGGTCATGGCG
GGGGCGGCGGCAGGGGCCGGCGCGGCGGGCGGATGTTCGCCGGCGGCGAGCTTCGCCTGCTGCTTCTGCACCTTGTCGCC
CAGCAGCCGCGCCACGGCTATGACCTGATCCGTGCGGTGGGCGAACTGGCCGGCGGCGAATATGCGCCCAGCCCCGGTGT
GGTCTATCCGACGCTCAGCCTGCTGGTGGACGAAGGGCTGATTGCCGAGGAAGCCGGCGACGGCCCGCGCAAGGCGTTTG
CCGCAACCGATGCGGGCCGCACCGAGCTCGATGGCAGGAGCGACGAACTCGACGCCATCGTCGCGCGGCTCAAGGCACTG
GGCGACCAGGGTGAGCGCTCGGCCAGTCCGCCGGTACGCCGCGCGATGGGCAATCTTCACGCCGTGCTGCGCAATCGCGC
CATGGCCGAAGGTTTCGACACCGAGACGGCCCATGCCATCGCCGACATCCTCGACGAGGCCGCGCGCCGGATCGAAAGGC
TTTGA

Upstream 100 bases:

>100_bases
ATCCCTGCGGAAATAGGTGCCTGCGCGGAAAATTGCATCAGCCTCTTGCATGATCGCAATTAAGATATATCTTAGAGCCA
TCATGAAAAGGAACATGCAC

Downstream 100 bases:

>100_bases
TGTTGCACGAGTCCGCCCTTTCGCGGCACTTTGACGACATCAATGCCCGTGGTATCCTCTCCCCGCAGCGCAAGGGGAGA
GGCGCCATGCAGGAAACGAC

Product: PadR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MHFERGRDNCGRNGAGFDRRAARMMAMMGGRFGGGPFGEGGPFGEGRGFGGHGGGGGRGRRGGRMFAGGELRLLLLHLVA
QQPRHGYDLIRAVGELAGGEYAPSPGVVYPTLSLLVDEGLIAEEAGDGPRKAFAATDAGRTELDGRSDELDAIVARLKAL
GDQGERSASPPVRRAMGNLHAVLRNRAMAEGFDTETAHAIADILDEAARRIERL

Sequences:

>Translated_214_residues
MHFERGRDNCGRNGAGFDRRAARMMAMMGGRFGGGPFGEGGPFGEGRGFGGHGGGGGRGRRGGRMFAGGELRLLLLHLVA
QQPRHGYDLIRAVGELAGGEYAPSPGVVYPTLSLLVDEGLIAEEAGDGPRKAFAATDAGRTELDGRSDELDAIVARLKAL
GDQGERSASPPVRRAMGNLHAVLRNRAMAEGFDTETAHAIADILDEAARRIERL
>Mature_214_residues
MHFERGRDNCGRNGAGFDRRAARMMAMMGGRFGGGPFGEGGPFGEGRGFGGHGGGGGRGRRGGRMFAGGELRLLLLHLVA
QQPRHGYDLIRAVGELAGGEYAPSPGVVYPTLSLLVDEGLIAEEAGDGPRKAFAATDAGRTELDGRSDELDAIVARLKAL
GDQGERSASPPVRRAMGNLHAVLRNRAMAEGFDTETAHAIADILDEAARRIERL

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789452, Length=146, Percent_Identity=34.9315068493151, Blast_Score=95, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR [H]

EC number: NA

Molecular weight: Translated: 22564; Mature: 22564

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFERGRDNCGRNGAGFDRRAARMMAMMGGRFGGGPFGEGGPFGEGRGFGGHGGGGGRGR
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RGGRMFAGGELRLLLLHLVAQQPRHGYDLIRAVGELAGGEYAPSPGVVYPTLSLLVDEGL
CCCEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC
IAEEAGDGPRKAFAATDAGRTELDGRSDELDAIVARLKALGDQGERSASPPVRRAMGNLH
HHHCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
AVLRNRAMAEGFDTETAHAIADILDEAARRIERL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHFERGRDNCGRNGAGFDRRAARMMAMMGGRFGGGPFGEGGPFGEGRGFGGHGGGGGRGR
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RGGRMFAGGELRLLLLHLVAQQPRHGYDLIRAVGELAGGEYAPSPGVVYPTLSLLVDEGL
CCCEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC
IAEEAGDGPRKAFAATDAGRTELDGRSDELDAIVARLKALGDQGERSASPPVRRAMGNLH
HHHCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
AVLRNRAMAEGFDTETAHAIADILDEAARRIERL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]