| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is 87200519
Identifier: 87200519
GI number: 87200519
Start: 2709608
End: 2709940
Strand: Reverse
Name: 87200519
Synonym: Saro_2506
Alternate gene names: NA
Gene position: 2709940-2709608 (Counterclockwise)
Preceding gene: 87200521
Following gene: 87200518
Centisome position: 76.09
GC content: 70.27
Gene sequence:
>333_bases GTGCGCCGGGATGGAGAGGTGAGCATGGCTTGCTGCGCGTTCGCGGTATTCTTGCTGATGTGGCTGACAAGGCCCCTGCG GTGGCTGGCGGTGCGGCTCGGCCTGTCGGGGCAGGGGGCGACCGCGAACCCGGCCGTCAGCTGGCGTCCCGGCCAGCAAC AGCTCCAGCTTCCGAGGCGCGGCCCTGCATCGTCCGTCGTAACAGCCGTGGCACTGGCTTTCATCGCCGGGCCGGCGACA GCCGCACCGCTGGTGGATGATGCCCCGGCCACGGGCTATGCCGCAGCGTTCCATGCCATGCTGTGCGGTCCTGGTCGGGA GGCGCGTCGATGA
Upstream 100 bases:
>100_bases GGACATGCGGCAGATATATTGGAGACTTCTATAAATCGAAAGATTAAATCTATTGGACGCAGCAAGACCCCCTCTCTAGC CTTTCCTCGAAGGCGACGAA
Downstream 100 bases:
>100_bases CCAGCCTTGCGACGGAACTGCCGCTCCCCGGCCTGCCATCGTTCAGGGGCATGACCGGCCCCGCAACGGCGATGAGGCAA CGCCGAACCTGGTTGATCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MRRDGEVSMACCAFAVFLLMWLTRPLRWLAVRLGLSGQGATANPAVSWRPGQQQLQLPRRGPASSVVTAVALAFIAGPAT AAPLVDDAPATGYAAAFHAMLCGPGREARR
Sequences:
>Translated_110_residues MRRDGEVSMACCAFAVFLLMWLTRPLRWLAVRLGLSGQGATANPAVSWRPGQQQLQLPRRGPASSVVTAVALAFIAGPAT AAPLVDDAPATGYAAAFHAMLCGPGREARR >Mature_110_residues MRRDGEVSMACCAFAVFLLMWLTRPLRWLAVRLGLSGQGATANPAVSWRPGQQQLQLPRRGPASSVVTAVALAFIAGPAT AAPLVDDAPATGYAAAFHAMLCGPGREARR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11590; Mature: 11590
Theoretical pI: Translated: 11.52; Mature: 11.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRDGEVSMACCAFAVFLLMWLTRPLRWLAVRLGLSGQGATANPAVSWRPGQQQLQLPRR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCC GPASSVVTAVALAFIAGPATAAPLVDDAPATGYAAAFHAMLCGPGREARR CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRRDGEVSMACCAFAVFLLMWLTRPLRWLAVRLGLSGQGATANPAVSWRPGQQQLQLPRR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCC GPASSVVTAVALAFIAGPATAAPLVDDAPATGYAAAFHAMLCGPGREARR CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA