| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200502
Identifier: 87200502
GI number: 87200502
Start: 2689361
End: 2689897
Strand: Reverse
Name: 87200502
Synonym: Saro_2489
Alternate gene names: NA
Gene position: 2689897-2689361 (Counterclockwise)
Preceding gene: 87200503
Following gene: 87200501
Centisome position: 75.53
GC content: 62.94
Gene sequence:
>537_bases ATGACCCGCTACGTCGCCCTGTTCGGTTCGATCAACGTCGGCGGTAATCGCGTGACGATGGCGGACTTGCGCTGGGCATT CGAGCGGGAAGGGCTGACCGGTCTGGAAACCGTCGTGGCGAGCGGCAATCTGCTGTTCGACTACGACGACCGGCCGCTCG ACGGGCTCGAAGACCTGTTCAGCCACGTCATGCTCGACCGGTTCGATATCAAGAGCTTCGTCGCCGTTCGTGACCGTGCC GCGATTGCCGAGGCGGTGGAGGGCAACCCCTTTACCGGCATCGGCGCCGACAATCAGGTGCACACCCTGTTTCTCGAACG CCAGCCCGATCAGGCCGCGTTCGACAAGCTCGTGGCCGATCAGGCGGCGCGCGGTCTGGAAAAGTTCGCAATCGGCAATC GCTGCATCTATATCGACTTCGTGGAAGGGGTCGGCGACAGCAAGTTGTCGAGCGCCTTCCTCGAACGGCGGCTTGGCTGT CGGGGCACCGCGCGCAATGTGCGCTCGATCGCCCGTATCCTTGCGAAGATGAGTTAG
Upstream 100 bases:
>100_bases TCGTTCCGCGTAGCTGGAACACTGCAGATTCCCCTCCCGCGTGCGGGAGGGGAGAGCAACGACGTTCCTTCCGGCCCGGC CGGAGGAATGGAGATATTGA
Downstream 100 bases:
>100_bases ACGTGGCCAAGCAACAGACGTCCCCCGAAACCCGCTCCGTCCGCCTGCTCAAGGTGGGTGAACAGGTGCGCCATATCCTG TCCGAGCTTCTGGCCCGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MTRYVALFGSINVGGNRVTMADLRWAFEREGLTGLETVVASGNLLFDYDDRPLDGLEDLFSHVMLDRFDIKSFVAVRDRA AIAEAVEGNPFTGIGADNQVHTLFLERQPDQAAFDKLVADQAARGLEKFAIGNRCIYIDFVEGVGDSKLSSAFLERRLGC RGTARNVRSIARILAKMS
Sequences:
>Translated_178_residues MTRYVALFGSINVGGNRVTMADLRWAFEREGLTGLETVVASGNLLFDYDDRPLDGLEDLFSHVMLDRFDIKSFVAVRDRA AIAEAVEGNPFTGIGADNQVHTLFLERQPDQAAFDKLVADQAARGLEKFAIGNRCIYIDFVEGVGDSKLSSAFLERRLGC RGTARNVRSIARILAKMS >Mature_177_residues TRYVALFGSINVGGNRVTMADLRWAFEREGLTGLETVVASGNLLFDYDDRPLDGLEDLFSHVMLDRFDIKSFVAVRDRAA IAEAVEGNPFTGIGADNQVHTLFLERQPDQAAFDKLVADQAARGLEKFAIGNRCIYIDFVEGVGDSKLSSAFLERRLGCR GTARNVRSIARILAKMS
Specific function: Unknown
COG id: COG3797
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19651; Mature: 19519
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRYVALFGSINVGGNRVTMADLRWAFEREGLTGLETVVASGNLLFDYDDRPLDGLEDLF CCEEEEEEEEEECCCCEEEHHHHHHHHHHCCCCHHHHHHHCCCEEEECCCCCCHHHHHHH SHVMLDRFDIKSFVAVRDRAAIAEAVEGNPFTGIGADNQVHTLFLERQPDQAAFDKLVAD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHH QAARGLEKFAIGNRCIYIDFVEGVGDSKLSSAFLERRLGCRGTARNVRSIARILAKMS HHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure TRYVALFGSINVGGNRVTMADLRWAFEREGLTGLETVVASGNLLFDYDDRPLDGLEDLF CEEEEEEEEEECCCCEEEHHHHHHHHHHCCCCHHHHHHHCCCEEEECCCCCCHHHHHHH SHVMLDRFDIKSFVAVRDRAAIAEAVEGNPFTGIGADNQVHTLFLERQPDQAAFDKLVAD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHH QAARGLEKFAIGNRCIYIDFVEGVGDSKLSSAFLERRLGCRGTARNVRSIARILAKMS HHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA