| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200477
Identifier: 87200477
GI number: 87200477
Start: 2659717
End: 2660265
Strand: Reverse
Name: 87200477
Synonym: Saro_2464
Alternate gene names: NA
Gene position: 2660265-2659717 (Counterclockwise)
Preceding gene: 87200481
Following gene: 87200476
Centisome position: 74.69
GC content: 61.02
Gene sequence:
>549_bases ATGCAACTGAAGAGGATTCACCACGCCGCCTACCGGTGTCGCGATGCGCGCGAGACAGTGGAGTGGTACCAGAAGCACCT GGGCATGGAGTATATCCTGGCCTTCGCGGAGGACTACGTTCCGTCCACGCACGCCTTTGACCCCTACATGCATGTGTTTC TCGATGCAGGCGGCGGAAATGTTCTGGCTTTCTTCGAGTTGCCGCAGCAGCCGGAAATGGGGCGCGACCCCAATACCCCT GCCTGGGTCCAGCACATCGCTTTCGAGGTCGGCAGCCGTGAAGAACTGACCGAGGCCAAGGCGAGGCTCGAGGGGGAGGG TATCGAGGTGATCGGACCGACCGACCATACCGTGTTTCACTCGATCTACTTCTTTGATCCCAACGGCCACCGCCTTGAAC TGGCATGGAACGATCCGGCGGCGCTCAAGGCTGAGCAGGATCTCAAGGTTATTCGCTGGGAAATGCTTGAGGAATGGTCG CGCACCCGCCGCGCGCCCGAGATCGGTAAGTGGGCGCATGGCAGTGAGCTCGACGGCGCGAGCGAGTGA
Upstream 100 bases:
>100_bases ACATCTTTTCTCAATCTTTGACATTTTATTTGAAAATGAATCGCGCGATCTTCTCGCCTGAACCGGCGACCAGCCGGAGT GCATGGTCTGGGGAAATGGG
Downstream 100 bases:
>100_bases CGCGCAAACAATTCTCGCGGACGATCGACGATGAACCTGCCCTCTGTTGACAAAACGCATTCGGCTGACCTTGCAAGCTG GGTGCCTTCGGCGCTCGGCC
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: Glyoxalase Family Protein; Glyoxalase/Bleomycin Resistance Protein; Glyoxalase/Bleomycin Resistance; Lactoylglutathione Lyase And Related Lyases Protein; Glyoxalase-Family Protein
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MQLKRIHHAAYRCRDARETVEWYQKHLGMEYILAFAEDYVPSTHAFDPYMHVFLDAGGGNVLAFFELPQQPEMGRDPNTP AWVQHIAFEVGSREELTEAKARLEGEGIEVIGPTDHTVFHSIYFFDPNGHRLELAWNDPAALKAEQDLKVIRWEMLEEWS RTRRAPEIGKWAHGSELDGASE
Sequences:
>Translated_182_residues MQLKRIHHAAYRCRDARETVEWYQKHLGMEYILAFAEDYVPSTHAFDPYMHVFLDAGGGNVLAFFELPQQPEMGRDPNTP AWVQHIAFEVGSREELTEAKARLEGEGIEVIGPTDHTVFHSIYFFDPNGHRLELAWNDPAALKAEQDLKVIRWEMLEEWS RTRRAPEIGKWAHGSELDGASE >Mature_182_residues MQLKRIHHAAYRCRDARETVEWYQKHLGMEYILAFAEDYVPSTHAFDPYMHVFLDAGGGNVLAFFELPQQPEMGRDPNTP AWVQHIAFEVGSREELTEAKARLEGEGIEVIGPTDHTVFHSIYFFDPNGHRLELAWNDPAALKAEQDLKVIRWEMLEEWS RTRRAPEIGKWAHGSELDGASE
Specific function: Unknown
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20976; Mature: 20976
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS00082 EXTRADIOL_DIOXYGENAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLKRIHHAAYRCRDARETVEWYQKHLGMEYILAFAEDYVPSTHAFDPYMHVFLDAGGGN CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCC VLAFFELPQQPEMGRDPNTPAWVQHIAFEVGSREELTEAKARLEGEGIEVIGPTDHTVFH EEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCCEEE SIYFFDPNGHRLELAWNDPAALKAEQDLKVIRWEMLEEWSRTRRAPEIGKWAHGSELDGA EEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC SE CC >Mature Secondary Structure MQLKRIHHAAYRCRDARETVEWYQKHLGMEYILAFAEDYVPSTHAFDPYMHVFLDAGGGN CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCC VLAFFELPQQPEMGRDPNTPAWVQHIAFEVGSREELTEAKARLEGEGIEVIGPTDHTVFH EEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCCEEE SIYFFDPNGHRLELAWNDPAALKAEQDLKVIRWEMLEEWSRTRRAPEIGKWAHGSELDGA EEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC SE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA