| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200465
Identifier: 87200465
GI number: 87200465
Start: 2642004
End: 2643956
Strand: Reverse
Name: 87200465
Synonym: Saro_2452
Alternate gene names: NA
Gene position: 2643956-2642004 (Counterclockwise)
Preceding gene: 87200466
Following gene: 87200464
Centisome position: 74.24
GC content: 65.03
Gene sequence:
>1953_bases ATGAACGCTCCGAAGATCACCGACCGTCCCGTCGCTGCCGATGCCGTCGACCGCGCCCTGTTGAGGCAAGGCGTGGACGA GGCAAACATCCCCGCGCTGCTCATGGTGCTCGTCCAGCTCACCGGTGACCGCCGTTATCTCGAGCCGCCCTATGCTCCGC GACGGGGCAAGGGCCTGGATGACAATGACAGTGGCGGCCTGCCTGACGAGATCCAGCACGAAGTCCGGGAAGCCGCCTGG GGTGCCATCACCGGTTGGCTCGACGGCCGCGAACCCGCGCTTGCGCGTCCGTCCAATCCTGAACTTGCGGCCATGCTTGC CGTCGCCATGACCGAGGCGGTGCCGCCCGAGTATGGCGACATCGTCGCCGCGACCATGCATCTCGATCCCGCGCCACAGC CGGCCGCGCCGTCGAAGCCGCTCAAGGCCATCATAATCGGCGCCGGCATTTCGGGCATGGTTGCATCGGTTCGCCTCCGC GAGATGGGGATCGAGCATACGATTTTCGAGAAGAACAACGAGTTCGGCGGCACCTGGTGGGAAAATCGCTATCCTGGTTG CGGCGTCGATACCCCGAACCTCACCTACACCTTCTCATTCCGCCCGAACGACTGGTCAGCCTTCTTTCCCTTGCGCGACG AGATCGAGAACTACCTGCTGGAAACCGCCCGCGAGAGCGGCCTCTATGATCGCGTCCGCTTCGGCACCAAGGTCGAGCGT GCCGAATGGCTGGCTGATCGTAACCAGTGGCAGGTCACAGTTCGCGCCGAAGACGGTTCCGAGGAGGTCCACCACGCGGA TATCGTGATGAGCGCCGTGGGCATCCTCAACATGCCCGTCGTGCCCGACATCAAGGGCCTTTCGGGCTTCGCCGGCCGCG TCGTCCATACCAGTGACTGGCCGCAGGACATCGATCTCAAGGGCAAGCGCGTGGCCGTCGTCGGCAATGGTGCTTCGGCC ATGCAGGTCGTCCCCGCGATTGCCGACCAAGTCGCGGAGCTGACCATTTTCGCCCGGTCCAAGCAATGGGCGGCGCCGTT CCCGCAGTTCCGCAAGCCGGTGCCAAACGGCGTGCGCTACCTGATGCAGGTGGTTCCGCTCTATCGGGCGTGGGTCGAGC AGCGCCTGTCCTGGACCTTCAACGATCGCGTGCACGGTACCCTGTTCCGCGATCCGGACTGGAAGGAACCGGCCCGCGCG GTAAACGCGATCAACGACGGGCATCGCGAATTCTTCACCCGCTATGTTCGCGAGGAACTGGGCGAACGACAGGACCTGCT GCCGCTGGTCCTCCCTGACTATCCGCCCTTTGCCAAGCGCATGCTGCTCGACAACGGCTGGTATCGCACCTTGCGCAAGC CCCACGTGAAGCTTGTGCCGCAGCGCCTGGCCGAGGTGCGCGGGCATACGCTGGTGGCGCAGGACGGGCAGGAGATCGAG GCCGACGTGCTGATCCTCGCTACCGGGTTCCAGGCGGCAAACGTACTTGGGTCCTACGACGTGATCGGGCGCGATGGCCG CGACCTGCATGAGTTCTGGGAGGGTGACAATGCGGCGGCCTATCTCGGCACGCTGGTTCCGGGCTTCCCCAACTTCTTCA TCCTGCTCGGCCCCAACGTCGGCTCCGGCCACGGCGGCAGCATGATCCGCAATATCGAGAACCAGGCGCACTATGCCACC CGCGTGATCGAGGCGCTGGTGAAGTCGGGTGCCGATGCGGTGGAAGTGCGCGAGGATGTCTATGGCGATTACAAGGCCCG GATCGACGCCGCGCACGAGAAGCTGGTCTGGACCCATCCGGGCGCGACCAACTGGTATCGCAATTCGCGTGGGCGGGTCG TCGCGATCACGCCGTGGCGCAACGATGCCTTCTGGCGGATGACTCGCGAGGCGAGGCCCGAGGATCTCAGCTTCAGCGGA GCGCCCACGGACAAGACCGAGCAGGCCGCCTGA
Upstream 100 bases:
>100_bases CCGGTCCGCGATTGACTCTGGATACTGATGAGTAGATATTTCTTATTGAAGGTATGATCCGTGCGGCAGTGCACCGGAAC GAAGCCCGACAAGGATTGAC
Downstream 100 bases:
>100_bases TCAGAAGCGGCGCCGGGAAGGGGAGAGAAAACCAATGGAAGCCGAAGCTGCAATTCCACCGCTCGATACCTCCGACCCGG CGCTTATCCCCGATCCCTGG
Product: cyclohexanone monooxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 650; Mature: 650
Protein sequence:
>650_residues MNAPKITDRPVAADAVDRALLRQGVDEANIPALLMVLVQLTGDRRYLEPPYAPRRGKGLDDNDSGGLPDEIQHEVREAAW GAITGWLDGREPALARPSNPELAAMLAVAMTEAVPPEYGDIVAATMHLDPAPQPAAPSKPLKAIIIGAGISGMVASVRLR EMGIEHTIFEKNNEFGGTWWENRYPGCGVDTPNLTYTFSFRPNDWSAFFPLRDEIENYLLETARESGLYDRVRFGTKVER AEWLADRNQWQVTVRAEDGSEEVHHADIVMSAVGILNMPVVPDIKGLSGFAGRVVHTSDWPQDIDLKGKRVAVVGNGASA MQVVPAIADQVAELTIFARSKQWAAPFPQFRKPVPNGVRYLMQVVPLYRAWVEQRLSWTFNDRVHGTLFRDPDWKEPARA VNAINDGHREFFTRYVREELGERQDLLPLVLPDYPPFAKRMLLDNGWYRTLRKPHVKLVPQRLAEVRGHTLVAQDGQEIE ADVLILATGFQAANVLGSYDVIGRDGRDLHEFWEGDNAAAYLGTLVPGFPNFFILLGPNVGSGHGGSMIRNIENQAHYAT RVIEALVKSGADAVEVREDVYGDYKARIDAAHEKLVWTHPGATNWYRNSRGRVVAITPWRNDAFWRMTREARPEDLSFSG APTDKTEQAA
Sequences:
>Translated_650_residues MNAPKITDRPVAADAVDRALLRQGVDEANIPALLMVLVQLTGDRRYLEPPYAPRRGKGLDDNDSGGLPDEIQHEVREAAW GAITGWLDGREPALARPSNPELAAMLAVAMTEAVPPEYGDIVAATMHLDPAPQPAAPSKPLKAIIIGAGISGMVASVRLR EMGIEHTIFEKNNEFGGTWWENRYPGCGVDTPNLTYTFSFRPNDWSAFFPLRDEIENYLLETARESGLYDRVRFGTKVER AEWLADRNQWQVTVRAEDGSEEVHHADIVMSAVGILNMPVVPDIKGLSGFAGRVVHTSDWPQDIDLKGKRVAVVGNGASA MQVVPAIADQVAELTIFARSKQWAAPFPQFRKPVPNGVRYLMQVVPLYRAWVEQRLSWTFNDRVHGTLFRDPDWKEPARA VNAINDGHREFFTRYVREELGERQDLLPLVLPDYPPFAKRMLLDNGWYRTLRKPHVKLVPQRLAEVRGHTLVAQDGQEIE ADVLILATGFQAANVLGSYDVIGRDGRDLHEFWEGDNAAAYLGTLVPGFPNFFILLGPNVGSGHGGSMIRNIENQAHYAT RVIEALVKSGADAVEVREDVYGDYKARIDAAHEKLVWTHPGATNWYRNSRGRVVAITPWRNDAFWRMTREARPEDLSFSG APTDKTEQAA >Mature_650_residues MNAPKITDRPVAADAVDRALLRQGVDEANIPALLMVLVQLTGDRRYLEPPYAPRRGKGLDDNDSGGLPDEIQHEVREAAW GAITGWLDGREPALARPSNPELAAMLAVAMTEAVPPEYGDIVAATMHLDPAPQPAAPSKPLKAIIIGAGISGMVASVRLR EMGIEHTIFEKNNEFGGTWWENRYPGCGVDTPNLTYTFSFRPNDWSAFFPLRDEIENYLLETARESGLYDRVRFGTKVER AEWLADRNQWQVTVRAEDGSEEVHHADIVMSAVGILNMPVVPDIKGLSGFAGRVVHTSDWPQDIDLKGKRVAVVGNGASA MQVVPAIADQVAELTIFARSKQWAAPFPQFRKPVPNGVRYLMQVVPLYRAWVEQRLSWTFNDRVHGTLFRDPDWKEPARA VNAINDGHREFFTRYVREELGERQDLLPLVLPDYPPFAKRMLLDNGWYRTLRKPHVKLVPQRLAEVRGHTLVAQDGQEIE ADVLILATGFQAANVLGSYDVIGRDGRDLHEFWEGDNAAAYLGTLVPGFPNFFILLGPNVGSGHGGSMIRNIENQAHYAT RVIEALVKSGADAVEVREDVYGDYKARIDAAHEKLVWTHPGATNWYRNSRGRVVAITPWRNDAFWRMTREARPEDLSFSG APTDKTEQAA
Specific function: Unknown
COG id: COG2072
COG function: function code P; Predicted flavoprotein involved in K+ transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FAD-binding monooxygenase family [H]
Homologues:
Organism=Homo sapiens, GI50541965, Length=373, Percent_Identity=25.4691689008043, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI50541961, Length=373, Percent_Identity=25.4691689008043, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI4503757, Length=222, Percent_Identity=25.6756756756757, Blast_Score=72, Evalue=2e-12, Organism=Caenorhabditis elegans, GI25145785, Length=240, Percent_Identity=27.9166666666667, Blast_Score=82, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17555726, Length=222, Percent_Identity=27.9279279279279, Blast_Score=71, Evalue=2e-12, Organism=Caenorhabditis elegans, GI193202226, Length=210, Percent_Identity=26.1904761904762, Blast_Score=69, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR020946 - InterPro: IPR016040 [H]
Pfam domain/function: PF00743 FMO-like [H]
EC number: NA
Molecular weight: Translated: 72470; Mature: 72470
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPKITDRPVAADAVDRALLRQGVDEANIPALLMVLVQLTGDRRYLEPPYAPRRGKGLD CCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC DNDSGGLPDEIQHEVREAAWGAITGWLDGREPALARPSNPELAAMLAVAMTEAVPPEYGD CCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC IVAATMHLDPAPQPAAPSKPLKAIIIGAGISGMVASVRLREMGIEHTIFEKNNEFGGTWW EEEEEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCC ENRYPGCGVDTPNLTYTFSFRPNDWSAFFPLRDEIENYLLETARESGLYDRVRFGTKVER CCCCCCCCCCCCCEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHCCCHHHHHCCCHHHH AEWLADRNQWQVTVRAEDGSEEVHHADIVMSAVGILNMPVVPDIKGLSGFAGRVVHTSDW HHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCC PQDIDLKGKRVAVVGNGASAMQVVPAIADQVAELTIFARSKQWAAPFPQFRKPVPNGVRY CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHCCCCHHHHH LMQVVPLYRAWVEQRLSWTFNDRVHGTLFRDPDWKEPARAVNAINDGHREFFTRYVREEL HHHHHHHHHHHHHHHHCEEECCCCCEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHH GERQDLLPLVLPDYPPFAKRMLLDNGWYRTLRKPHVKLVPQRLAEVRGHTLVAQDGQEIE CCHHCCCCEECCCCCHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCCC ADVLILATGFQAANVLGSYDVIGRDGRDLHEFWEGDNAAAYLGTLVPGFPNFFILLGPNV CCEEEEEECCHHHHHHCCCCCCCCCCCHHHHHHCCCCCHHHHHHHCCCCCCEEEEECCCC GSGHGGSMIRNIENQAHYATRVIEALVKSGADAVEVREDVYGDYKARIDAAHEKLVWTHP CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHCCCEEEEECC GATNWYRNSRGRVVAITPWRNDAFWRMTREARPEDLSFSGAPTDKTEQAA CCCCCEECCCCCEEEEECCCCCCCEEEHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNAPKITDRPVAADAVDRALLRQGVDEANIPALLMVLVQLTGDRRYLEPPYAPRRGKGLD CCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC DNDSGGLPDEIQHEVREAAWGAITGWLDGREPALARPSNPELAAMLAVAMTEAVPPEYGD CCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC IVAATMHLDPAPQPAAPSKPLKAIIIGAGISGMVASVRLREMGIEHTIFEKNNEFGGTWW EEEEEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCC ENRYPGCGVDTPNLTYTFSFRPNDWSAFFPLRDEIENYLLETARESGLYDRVRFGTKVER CCCCCCCCCCCCCEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHCCCHHHHHCCCHHHH AEWLADRNQWQVTVRAEDGSEEVHHADIVMSAVGILNMPVVPDIKGLSGFAGRVVHTSDW HHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCC PQDIDLKGKRVAVVGNGASAMQVVPAIADQVAELTIFARSKQWAAPFPQFRKPVPNGVRY CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHCCCCHHHHH LMQVVPLYRAWVEQRLSWTFNDRVHGTLFRDPDWKEPARAVNAINDGHREFFTRYVREEL HHHHHHHHHHHHHHHHCEEECCCCCEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHH GERQDLLPLVLPDYPPFAKRMLLDNGWYRTLRKPHVKLVPQRLAEVRGHTLVAQDGQEIE CCHHCCCCEECCCCCHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCCC ADVLILATGFQAANVLGSYDVIGRDGRDLHEFWEGDNAAAYLGTLVPGFPNFFILLGPNV CCEEEEEECCHHHHHHCCCCCCCCCCCHHHHHHCCCCCHHHHHHHCCCCCCEEEEECCCC GSGHGGSMIRNIENQAHYATRVIEALVKSGADAVEVREDVYGDYKARIDAAHEKLVWTHP CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHCCCEEEEECC GATNWYRNSRGRVVAITPWRNDAFWRMTREARPEDLSFSGAPTDKTEQAA CCCCCEECCCCCEEEEECCCCCCCEEEHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]