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The map label for this gene is 87200407

Identifier: 87200407

GI number: 87200407

Start: 2560701

End: 2562269

Strand: Direct

Name: 87200407

Synonym: Saro_2394

Alternate gene names: NA

Gene position: 2560701-2562269 (Clockwise)

Preceding gene: 87200406

Following gene: 87200411

Centisome position: 71.9

GC content: 67.37

Gene sequence:

>1569_bases
ATGTCCGCCCCCGCTCCCTCCACCCCCGTCATCGTCCCCATCCTCGGCGACCAGCTTTCACCCCACATCTCGAGCCTTGC
CGACCGCAGCCCCGACGACACCGTGATCCTGATGATGGAAGTGACGGAGGAGACGACCTACGTCCGCCACCACAAGGCCA
AGATCGCTATGATCCTCTCGGCCATGCGCCACTTCGCCGAGGAACTGCGCGGGGCCGGGTGGACGGTCGATTACGTACGG
CTCGACGATCCCGCCAACACCGGCACCTTCACTGGCGAGGTAGCCCGCGCGGTGGAGCGCCACGGCGCGCGCGGGGTGCA
GGCCACCGAGCCCGGCGAATGGCGCGTCAGGCAGGCGATGGAGCACTGGCGCACCGACCTTCCCGTCCGCGTGCGCATAC
TCCCCGACACCCGTTTCGTCTGCCCCCTCCCCGACTTCTACGAATGGGCCGCCGGTCGCAAGGAACTGCGCATGGAGTGG
TTCTACCGCGAGATGCGGCGGAAGACCGGCCTGCTGATGGACGGCGACAAGCCCGCCGGCGGCCGCTGGAACTTCGACGC
CGAGAATCGCGGCGGACCGGAAGCCGGCCTCAAGCCTCCCGCCCCGCCCCGCTTCACGCCTGACAGCATCACCGGTGAAG
TCCTCGATCTCGTCTCGACGCGCTTTGCCAGACATTTCGGGTCGCTCGAAAACTTCGGCTGGCCCGTCACCCGCACCGAG
GCCGAAGCCGCGCGCGATGCGTTCCTCGCCGACCGTCTTCCCCGCTTCGGCAAATATCAGGACGCGATGGTCGCGGGCCA
GGACTTCCTGTTCCACGCAGTCCTCTCGCCTGCCATCAACATCGGCCTGTTAGACCCGCTCGACCTCTGCCGCCGCGCAG
AGACCGAATGGCGCGAGGGCCGCGCGCCGCTCGAGGCGGTGGAAGGCTTCACCCGCCAGATCATCGGCTGGCGCGAATAC
GTGCGCGGCATGTACTGGCTCGAGATGCCAGCACTCGCGGATGCCAACGGCCTGGACGCGCACCGACCCCTGCCCGACTT
CTACTGGACCGGCGATACGCCGATGCGCTGCCTCGCCGATTGCGTGCGGACCACGCGCGACAATGCCTATGCCCACCACA
TCCAGCGCCTGATGGTGCTGGGCAACTTCGCGCTACTGGCAGGCCTCAGGCCGCAGGACGTCGCGGACTGGTATCTCGTC
GTCTATGCCGACGCCTTCGAATGGGTCGAACTGCCCAACGTCGCGGGGATGGTGCTCCATGCCGACAAGGGCCGCCTCGC
CTCCAAGCCCTACGCCGCGAGCGGGGCCTACATCGACAGGATGGGCGACTACTGCGGCAAATGCGCGTTCGATGTGAAGC
GGAAGACCGGCGAAGGCGCCTGCCCGTTCAACGCGCTCTACTGGCACTTCCTCGCCCGCAACGAGAAGAAGCTTGCAGGC
TACCACCGCCTCGCCCAACCTTACGCCACCTGGCGGCGAATGAGCGACGAAAAGCGCGCGGAATATCTCCTCAGCGCCGA
GGCCTTCCTCCGGACGCTCGATCCCGCAAAGCCCGGATGGGCGCGCTAG

Upstream 100 bases:

>100_bases
CCCGCCGGGCGTGCGCGTGGCGGTGGACATAGATCCCTACAGCTTCGTCTGACCCCAAGGGGCAGGTTGCACCAGCCGCC
CGGTCGGCCATTTCCGGACA

Downstream 100 bases:

>100_bases
CGCTTTACCCACATCGGCGGCCTGATCCCGCCCTGTCGCACCACCCGCACCAACAGGAGCAGTCCCGCGCCCGTCGCGAC
CGCCATCGCGATCACGCTCG

Product: deoxyribodipyrimidine photolyase-like protein

Products: NA

Alternate protein names: Deoxyribodipyrimidine Photolyase-Like Protein; Photolyase; Deoxyribodipyrimidine Photolyase Family Protein; Deoxyribodipyrimidine Photolyase; Photolyase Protein Family Protein; Deoxyribodipyrimidine Photolyase-Like Protein Protein; Photolyase Family Protein; Cryptochrome/Photolyase; DNA Photolyase; Bcct Transporter; Protein Related Deoxyribodipyrimidine Photolyase; Deoxyribodipyrimidine Photo-Lyase; Cryptochrome/Photolyase-Related; Photolyase Related Protein; BCCT Transporter; Alpha-Deoxyribodipyrimidine Photolyase-Related Protein; Deoxyribodipyrimidine Photolyase Related Protein; A Deoxyribodipyrimidine Photolyase-Like Protein; Deoxyribodipyrimidine Photolyase Homolog

Number of amino acids: Translated: 522; Mature: 521

Protein sequence:

>522_residues
MSAPAPSTPVIVPILGDQLSPHISSLADRSPDDTVILMMEVTEETTYVRHHKAKIAMILSAMRHFAEELRGAGWTVDYVR
LDDPANTGTFTGEVARAVERHGARGVQATEPGEWRVRQAMEHWRTDLPVRVRILPDTRFVCPLPDFYEWAAGRKELRMEW
FYREMRRKTGLLMDGDKPAGGRWNFDAENRGGPEAGLKPPAPPRFTPDSITGEVLDLVSTRFARHFGSLENFGWPVTRTE
AEAARDAFLADRLPRFGKYQDAMVAGQDFLFHAVLSPAINIGLLDPLDLCRRAETEWREGRAPLEAVEGFTRQIIGWREY
VRGMYWLEMPALADANGLDAHRPLPDFYWTGDTPMRCLADCVRTTRDNAYAHHIQRLMVLGNFALLAGLRPQDVADWYLV
VYADAFEWVELPNVAGMVLHADKGRLASKPYAASGAYIDRMGDYCGKCAFDVKRKTGEGACPFNALYWHFLARNEKKLAG
YHRLAQPYATWRRMSDEKRAEYLLSAEAFLRTLDPAKPGWAR

Sequences:

>Translated_522_residues
MSAPAPSTPVIVPILGDQLSPHISSLADRSPDDTVILMMEVTEETTYVRHHKAKIAMILSAMRHFAEELRGAGWTVDYVR
LDDPANTGTFTGEVARAVERHGARGVQATEPGEWRVRQAMEHWRTDLPVRVRILPDTRFVCPLPDFYEWAAGRKELRMEW
FYREMRRKTGLLMDGDKPAGGRWNFDAENRGGPEAGLKPPAPPRFTPDSITGEVLDLVSTRFARHFGSLENFGWPVTRTE
AEAARDAFLADRLPRFGKYQDAMVAGQDFLFHAVLSPAINIGLLDPLDLCRRAETEWREGRAPLEAVEGFTRQIIGWREY
VRGMYWLEMPALADANGLDAHRPLPDFYWTGDTPMRCLADCVRTTRDNAYAHHIQRLMVLGNFALLAGLRPQDVADWYLV
VYADAFEWVELPNVAGMVLHADKGRLASKPYAASGAYIDRMGDYCGKCAFDVKRKTGEGACPFNALYWHFLARNEKKLAG
YHRLAQPYATWRRMSDEKRAEYLLSAEAFLRTLDPAKPGWAR
>Mature_521_residues
SAPAPSTPVIVPILGDQLSPHISSLADRSPDDTVILMMEVTEETTYVRHHKAKIAMILSAMRHFAEELRGAGWTVDYVRL
DDPANTGTFTGEVARAVERHGARGVQATEPGEWRVRQAMEHWRTDLPVRVRILPDTRFVCPLPDFYEWAAGRKELRMEWF
YREMRRKTGLLMDGDKPAGGRWNFDAENRGGPEAGLKPPAPPRFTPDSITGEVLDLVSTRFARHFGSLENFGWPVTRTEA
EAARDAFLADRLPRFGKYQDAMVAGQDFLFHAVLSPAINIGLLDPLDLCRRAETEWREGRAPLEAVEGFTRQIIGWREYV
RGMYWLEMPALADANGLDAHRPLPDFYWTGDTPMRCLADCVRTTRDNAYAHHIQRLMVLGNFALLAGLRPQDVADWYLVV
YADAFEWVELPNVAGMVLHADKGRLASKPYAASGAYIDRMGDYCGKCAFDVKRKTGEGACPFNALYWHFLARNEKKLAGY
HRLAQPYATWRRMSDEKRAEYLLSAEAFLRTLDPAKPGWAR

Specific function: Unknown

COG id: COG3046

COG function: function code R; Uncharacterized protein related to deoxyribodipyrimidine photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59131; Mature: 59000

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPAPSTPVIVPILGDQLSPHISSLADRSPDDTVILMMEVTEETTYVRHHKAKIAMILS
CCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHH
AMRHFAEELRGAGWTVDYVRLDDPANTGTFTGEVARAVERHGARGVQATEPGEWRVRQAM
HHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
EHWRTDLPVRVRILPDTRFVCPLPDFYEWAAGRKELRMEWFYREMRRKTGLLMDGDKPAG
HHHCCCCCEEEEEECCCCEECCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCEECCCCCCC
GRWNFDAENRGGPEAGLKPPAPPRFTPDSITGEVLDLVSTRFARHFGSLENFGWPVTRTE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCH
AEAARDAFLADRLPRFGKYQDAMVAGQDFLFHAVLSPAINIGLLDPLDLCRRAETEWREG
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
RAPLEAVEGFTRQIIGWREYVRGMYWLEMPALADANGLDAHRPLPDFYWTGDTPMRCLAD
CCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCEECCCCHHHHHHH
CVRTTRDNAYAHHIQRLMVLGNFALLAGLRPQDVADWYLVVYADAFEWVELPNVAGMVLH
HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHCCCCCEEEEE
ADKGRLASKPYAASGAYIDRMGDYCGKCAFDVKRKTGEGACPFNALYWHFLARNEKKLAG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHH
YHRLAQPYATWRRMSDEKRAEYLLSAEAFLRTLDPAKPGWAR
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SAPAPSTPVIVPILGDQLSPHISSLADRSPDDTVILMMEVTEETTYVRHHKAKIAMILS
CCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHH
AMRHFAEELRGAGWTVDYVRLDDPANTGTFTGEVARAVERHGARGVQATEPGEWRVRQAM
HHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
EHWRTDLPVRVRILPDTRFVCPLPDFYEWAAGRKELRMEWFYREMRRKTGLLMDGDKPAG
HHHCCCCCEEEEEECCCCEECCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCEECCCCCCC
GRWNFDAENRGGPEAGLKPPAPPRFTPDSITGEVLDLVSTRFARHFGSLENFGWPVTRTE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCH
AEAARDAFLADRLPRFGKYQDAMVAGQDFLFHAVLSPAINIGLLDPLDLCRRAETEWREG
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
RAPLEAVEGFTRQIIGWREYVRGMYWLEMPALADANGLDAHRPLPDFYWTGDTPMRCLAD
CCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCEECCCCHHHHHHH
CVRTTRDNAYAHHIQRLMVLGNFALLAGLRPQDVADWYLVVYADAFEWVELPNVAGMVLH
HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHCCCCCEEEEE
ADKGRLASKPYAASGAYIDRMGDYCGKCAFDVKRKTGEGACPFNALYWHFLARNEKKLAG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHH
YHRLAQPYATWRRMSDEKRAEYLLSAEAFLRTLDPAKPGWAR
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA