Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is 87200369

Identifier: 87200369

GI number: 87200369

Start: 2502950

End: 2504809

Strand: Direct

Name: 87200369

Synonym: Saro_2356

Alternate gene names: NA

Gene position: 2502950-2504809 (Clockwise)

Preceding gene: 87200368

Following gene: 87200370

Centisome position: 70.28

GC content: 66.72

Gene sequence:

>1860_bases
GTGGCACTGACGCGTCGCGTTTCGACCTGCGCGATCGCACTGGCGATCATCCTTGCCGGGTGCGCACCGGCGACGGCCCG
GACAGGCGCTTCGGCCGACACGATACCGACTGCCCGGATCGACGCGGCACCGCCTCCCCTGCCCGTCACTTCGGCCAACG
TGGCGCTGGACCGCCTGTTCGCGGAAGATGCGCAAGTCTCGATGCAACTCGACCCGCTCGGCTCGCTGGAGCAGGGACAC
AAGGTCCCGGTCGAGCGGTTCGTGCTGCTGTTCACCCCGGAACTCATCCGCGAACGGCGCGAGGCGAATGCCCGGTCCCT
GGCCGAGCTGGCCAGGATCGATCCGGCAAAGCTCGATCGCAACCGCCGCATCTCGCGCGCAGTATTCGAGGATGCAAAGC
GGAACGAACAGGCGCTTCTCGCACCCGACGTCCAGCCACTTTTCGCGGCGCAGCCCTTCAACCACTTCGGCGGCTTCCAT
GTCGCCTATCCGGAGCTTTCCGCACCGGGCAGCGGCATCGCACTCGACACGGTCGAGGATTATCGGCTGCTCATTGCGCG
GCACAAGGCACTGCCGCAGGTCTTCGGCCAGGCCATCGCCCGGTTCCGGGAAGGCATGGCCAGCGGGGTTACCGAGCCTC
GGCTGACAGTCGACAACATGATCGTGCAGATCGACGCGCTGCTGGCCCAGCCGGTAGACCGTTCGCCATTCCTGGCTCCT
GCGCGGCAGTTTCCGGACGATGTGCCGGCAGCCGAACGCGCCAGGCTGGCGCGGGAGCTGGCGACGGTGGCGCGGCGCGA
GATCTATCCGGCCTATCGGACGCTGCGCCGCTTCCTAGCCAACGAATACCGGCCCGTGGCGCGCGAGCAGGTCGGCCTTT
CGGCGCTTCCAGACGGCGAACGGCTATACCGACTGCTGGCGCGGCAGCATACCACTGTGGACCTCGACCCGGCGGCGGTG
CACGAACTGGGTCTATCTGAGGTGGCACGCATCCAGTCCGAAATGGAGGACGTGAAGCGCCAGCTCGGTTTCCAGGGCCC
GCTGCGCAGCTTCTTCGACCACATCCGGACCGACCCGAAGTACCACCCGCACACGGAGCGGGAACTGGCGGAGGGGTTCC
GCGCCGTGGGCCGCAAGGTCGACGCGCTGGCGCCGCAGTACTTCCTGCACCTGCCCCTCACACCGCTGCTGATACAGCCC
TACCCCGCCTACCGCGCACGGTTCGAGGCAGGCGGCAGCTATGCGCAGGGATCGGCTGACGGGAAGCAACCCGGCGTATT
CTTCTACAATACCTATGACCTGAAGAGCCGCTTCCTGACCGGCGTTACCACGCTCTATCTCCATGAAGGCGCGCCGGGGC
ATCACTTCCAGATCAGCCTGGCGCAGGAAAACGCGAACCTCCCGGACTTCCAGCGCTTTGGCGGCAACACGGCCTATATC
GAAGGCTGGGCGCTCTATGCGGAGACGCTGGGCTACGAGATGGGGTTCTACAAGGACCCGATGCAGCACTGGGGCACGCT
CGACGACGAAATGCTGCGCGCGATGCGGCTCGTCGTGGACACCGGCCTTCACACCAGGGGATGGAGCCGAGAAGAAGCGG
TCGATTACATGCTGGCCAATTCCGGCATGGGCCGCACCGATGCGCAGGCCGAAGTCGACCGCTACATCGCCAACCCGGGT
CAGGCGCTGGCCTACAAGATCGGAGCGCTGACGATCCAGCGCCTGCGCCGGGAAGCGGAGGCGGCACTGGGCCGGCGCTT
CGACATCCGCCAGTTCCACGACCAGATTCTGGGGAGCGGCGCGCTGCCGATGCCGGTTCTCGAGGCCAAGGTGCGGGGTT
GGATCGCCGCCACGCGTTGA

Upstream 100 bases:

>100_bases
TGAAGCCCGACGGAACGCCAAACGCCAATGCGATGCATGCCGGCATGCCGGTCGTGCGAGGCACCAAGTACGTGCTGACC
AAGTGGTACAGGTCGCGCCC

Downstream 100 bases:

>100_bases
TGCTTGCCAGATGGGGCGACGGCTGCTCTTCTCGGCATGTGCGATCCGATGACGGGGGAATGGATGCTGGGGTACTTCAC
GGCGGCGCTGCCGCATTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 619; Mature: 618

Protein sequence:

>619_residues
MALTRRVSTCAIALAIILAGCAPATARTGASADTIPTARIDAAPPPLPVTSANVALDRLFAEDAQVSMQLDPLGSLEQGH
KVPVERFVLLFTPELIRERREANARSLAELARIDPAKLDRNRRISRAVFEDAKRNEQALLAPDVQPLFAAQPFNHFGGFH
VAYPELSAPGSGIALDTVEDYRLLIARHKALPQVFGQAIARFREGMASGVTEPRLTVDNMIVQIDALLAQPVDRSPFLAP
ARQFPDDVPAAERARLARELATVARREIYPAYRTLRRFLANEYRPVAREQVGLSALPDGERLYRLLARQHTTVDLDPAAV
HELGLSEVARIQSEMEDVKRQLGFQGPLRSFFDHIRTDPKYHPHTERELAEGFRAVGRKVDALAPQYFLHLPLTPLLIQP
YPAYRARFEAGGSYAQGSADGKQPGVFFYNTYDLKSRFLTGVTTLYLHEGAPGHHFQISLAQENANLPDFQRFGGNTAYI
EGWALYAETLGYEMGFYKDPMQHWGTLDDEMLRAMRLVVDTGLHTRGWSREEAVDYMLANSGMGRTDAQAEVDRYIANPG
QALAYKIGALTIQRLRREAEAALGRRFDIRQFHDQILGSGALPMPVLEAKVRGWIAATR

Sequences:

>Translated_619_residues
MALTRRVSTCAIALAIILAGCAPATARTGASADTIPTARIDAAPPPLPVTSANVALDRLFAEDAQVSMQLDPLGSLEQGH
KVPVERFVLLFTPELIRERREANARSLAELARIDPAKLDRNRRISRAVFEDAKRNEQALLAPDVQPLFAAQPFNHFGGFH
VAYPELSAPGSGIALDTVEDYRLLIARHKALPQVFGQAIARFREGMASGVTEPRLTVDNMIVQIDALLAQPVDRSPFLAP
ARQFPDDVPAAERARLARELATVARREIYPAYRTLRRFLANEYRPVAREQVGLSALPDGERLYRLLARQHTTVDLDPAAV
HELGLSEVARIQSEMEDVKRQLGFQGPLRSFFDHIRTDPKYHPHTERELAEGFRAVGRKVDALAPQYFLHLPLTPLLIQP
YPAYRARFEAGGSYAQGSADGKQPGVFFYNTYDLKSRFLTGVTTLYLHEGAPGHHFQISLAQENANLPDFQRFGGNTAYI
EGWALYAETLGYEMGFYKDPMQHWGTLDDEMLRAMRLVVDTGLHTRGWSREEAVDYMLANSGMGRTDAQAEVDRYIANPG
QALAYKIGALTIQRLRREAEAALGRRFDIRQFHDQILGSGALPMPVLEAKVRGWIAATR
>Mature_618_residues
ALTRRVSTCAIALAIILAGCAPATARTGASADTIPTARIDAAPPPLPVTSANVALDRLFAEDAQVSMQLDPLGSLEQGHK
VPVERFVLLFTPELIRERREANARSLAELARIDPAKLDRNRRISRAVFEDAKRNEQALLAPDVQPLFAAQPFNHFGGFHV
AYPELSAPGSGIALDTVEDYRLLIARHKALPQVFGQAIARFREGMASGVTEPRLTVDNMIVQIDALLAQPVDRSPFLAPA
RQFPDDVPAAERARLARELATVARREIYPAYRTLRRFLANEYRPVAREQVGLSALPDGERLYRLLARQHTTVDLDPAAVH
ELGLSEVARIQSEMEDVKRQLGFQGPLRSFFDHIRTDPKYHPHTERELAEGFRAVGRKVDALAPQYFLHLPLTPLLIQPY
PAYRARFEAGGSYAQGSADGKQPGVFFYNTYDLKSRFLTGVTTLYLHEGAPGHHFQISLAQENANLPDFQRFGGNTAYIE
GWALYAETLGYEMGFYKDPMQHWGTLDDEMLRAMRLVVDTGLHTRGWSREEAVDYMLANSGMGRTDAQAEVDRYIANPGQ
ALAYKIGALTIQRLRREAEAALGRRFDIRQFHDQILGSGALPMPVLEAKVRGWIAATR

Specific function: Unknown

COG id: COG4805

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68877; Mature: 68746

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALTRRVSTCAIALAIILAGCAPATARTGASADTIPTARIDAAPPPLPVTSANVALDRLF
CCCHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
AEDAQVSMQLDPLGSLEQGHKVPVERFVLLFTPELIRERREANARSLAELARIDPAKLDR
HHCCCEEEEECCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHCCHHHHHHHHHCCHHHHCC
NRRISRAVFEDAKRNEQALLAPDVQPLFAAQPFNHFGGFHVAYPELSAPGSGIALDTVED
CHHHHHHHHHHHHCCCCEEECCCCCHHHHCCCHHHCCCEEEECCCCCCCCCCEEECCHHH
YRLLIARHKALPQVFGQAIARFREGMASGVTEPRLTVDNMIVQIDALLAQPVDRSPFLAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
ARQFPDDVPAAERARLARELATVARREIYPAYRTLRRFLANEYRPVAREQVGLSALPDGE
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHH
RLYRLLARQHTTVDLDPAAVHELGLSEVARIQSEMEDVKRQLGFQGPLRSFFDHIRTDPK
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC
YHPHTERELAEGFRAVGRKVDALAPQYFLHLPLTPLLIQPYPAYRARFEAGGSYAQGSAD
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHCCCCHHHHHHHHCCCCCCCCCCC
GKQPGVFFYNTYDLKSRFLTGVTTLYLHEGAPGHHFQISLAQENANLPDFQRFGGNTAYI
CCCCCEEEEECHHHHHHHHHHHHEEEEECCCCCCEEEEEEECCCCCCCHHHHHCCCEEEE
EGWALYAETLGYEMGFYKDPMQHWGTLDDEMLRAMRLVVDTGLHTRGWSREEAVDYMLAN
EHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC
SGMGRTDAQAEVDRYIANPGQALAYKIGALTIQRLRREAEAALGRRFDIRQFHDQILGSG
CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
ALPMPVLEAKVRGWIAATR
CCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ALTRRVSTCAIALAIILAGCAPATARTGASADTIPTARIDAAPPPLPVTSANVALDRLF
CCHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
AEDAQVSMQLDPLGSLEQGHKVPVERFVLLFTPELIRERREANARSLAELARIDPAKLDR
HHCCCEEEEECCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHCCHHHHHHHHHCCHHHHCC
NRRISRAVFEDAKRNEQALLAPDVQPLFAAQPFNHFGGFHVAYPELSAPGSGIALDTVED
CHHHHHHHHHHHHCCCCEEECCCCCHHHHCCCHHHCCCEEEECCCCCCCCCCEEECCHHH
YRLLIARHKALPQVFGQAIARFREGMASGVTEPRLTVDNMIVQIDALLAQPVDRSPFLAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
ARQFPDDVPAAERARLARELATVARREIYPAYRTLRRFLANEYRPVAREQVGLSALPDGE
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHH
RLYRLLARQHTTVDLDPAAVHELGLSEVARIQSEMEDVKRQLGFQGPLRSFFDHIRTDPK
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC
YHPHTERELAEGFRAVGRKVDALAPQYFLHLPLTPLLIQPYPAYRARFEAGGSYAQGSAD
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHCCCCHHHHHHHHCCCCCCCCCCC
GKQPGVFFYNTYDLKSRFLTGVTTLYLHEGAPGHHFQISLAQENANLPDFQRFGGNTAYI
CCCCCEEEEECHHHHHHHHHHHHEEEEECCCCCCEEEEEEECCCCCCCHHHHHCCCEEEE
EGWALYAETLGYEMGFYKDPMQHWGTLDDEMLRAMRLVVDTGLHTRGWSREEAVDYMLAN
EHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC
SGMGRTDAQAEVDRYIANPGQALAYKIGALTIQRLRREAEAALGRRFDIRQFHDQILGSG
CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
ALPMPVLEAKVRGWIAATR
CCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA