| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200355
Identifier: 87200355
GI number: 87200355
Start: 2488513
End: 2489184
Strand: Direct
Name: 87200355
Synonym: Saro_2341
Alternate gene names: NA
Gene position: 2488513-2489184 (Clockwise)
Preceding gene: 87200354
Following gene: 87200356
Centisome position: 69.87
GC content: 71.13
Gene sequence:
>672_bases GTGATCGCAAGCTGGCCCTGCCCCGGGCCTGACGGCCACTGCGACGAATATGCCTTCGGCTTCGACCGCGCACGCAAGCG GCGCCTGCTGATCGTTCCCCCTCCTTTCGACGAGGCGAACCGCATGCGGCGGATGCTCGTCGATGCGATGCGGGCGCTGG ACGCAGCGGGGATCGACAGCTTCCTCCCCGACCTTCCGGGCTGCAACGAGAGCAGCCAGCACTTTTCGGCGCAGAGCCTT CACGCCTGGCGCGGGGCGATGGCGCAGGCGGCGCGGCACTTTGGCGCGACCGACGTGCTGGCGGTGCGCGGCGGGGCGCT GGTCTTTCCGGGCCATCTTCCGGGCTGGGTTCTGGAGCCGGCGAAGGGCGCGTCGATCCTGCGCCAGATGATCCGCGCAC GTGTGATCGCGGCGCGTGAGGCGGGGCGGCACGAGGACAGCGCCGCGCTTCTGGAACAGGGGCGCACACAGGGGCTGGAG CTTTCCGGGTGGCACTGCGGTGCCTCGCTGATCGCCGGACTCGAGAACGCCTTGCCGGAAATCGAGGGGCAGCGGATCGT GTCGCAGGGCGAACTCGGCGGCGCCGGGCTGTGGCTGCGGGCAGAACCCGCGGCGGCGCCCGAGCAATCGGCCGCGCTCG CACGCCTCATCGCGCAGGACCTTGGCGAATGA
Upstream 100 bases:
>100_bases AGGACCGCCTCGACATCGTGATCGAGGACGACGAGGTCGATGGCGAATTGCTCGAAACCTATGGCAACCTGCTGGCCTTC CTGGATTCCAAAGTCGCCGC
Downstream 100 bases:
>100_bases CGCGGCGGCATCTGACGTTCGCTTGCGAGGGCGCGACGCTGGTCGGCACGCTCGACATCGACGGGGCGAGCCATGGCACG GGGCTGCTAATTGTTTCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MIASWPCPGPDGHCDEYAFGFDRARKRRLLIVPPPFDEANRMRRMLVDAMRALDAAGIDSFLPDLPGCNESSQHFSAQSL HAWRGAMAQAARHFGATDVLAVRGGALVFPGHLPGWVLEPAKGASILRQMIRARVIAAREAGRHEDSAALLEQGRTQGLE LSGWHCGASLIAGLENALPEIEGQRIVSQGELGGAGLWLRAEPAAAPEQSAALARLIAQDLGE
Sequences:
>Translated_223_residues MIASWPCPGPDGHCDEYAFGFDRARKRRLLIVPPPFDEANRMRRMLVDAMRALDAAGIDSFLPDLPGCNESSQHFSAQSL HAWRGAMAQAARHFGATDVLAVRGGALVFPGHLPGWVLEPAKGASILRQMIRARVIAAREAGRHEDSAALLEQGRTQGLE LSGWHCGASLIAGLENALPEIEGQRIVSQGELGGAGLWLRAEPAAAPEQSAALARLIAQDLGE >Mature_223_residues MIASWPCPGPDGHCDEYAFGFDRARKRRLLIVPPPFDEANRMRRMLVDAMRALDAAGIDSFLPDLPGCNESSQHFSAQSL HAWRGAMAQAARHFGATDVLAVRGGALVFPGHLPGWVLEPAKGASILRQMIRARVIAAREAGRHEDSAALLEQGRTQGLE LSGWHCGASLIAGLENALPEIEGQRIVSQGELGGAGLWLRAEPAAAPEQSAALARLIAQDLGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23868; Mature: 23868
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIASWPCPGPDGHCDEYAFGFDRARKRRLLIVPPPFDEANRMRRMLVDAMRALDAAGIDS CCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHH FLPDLPGCNESSQHFSAQSLHAWRGAMAQAARHFGATDVLAVRGGALVFPGHLPGWVLEP HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEECCCEEEECCCCCCCEECC AKGASILRQMIRARVIAAREAGRHEDSAALLEQGRTQGLELSGWHCGASLIAGLENALPE CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCC IEGQRIVSQGELGGAGLWLRAEPAAAPEQSAALARLIAQDLGE CCCCHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MIASWPCPGPDGHCDEYAFGFDRARKRRLLIVPPPFDEANRMRRMLVDAMRALDAAGIDS CCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHH FLPDLPGCNESSQHFSAQSLHAWRGAMAQAARHFGATDVLAVRGGALVFPGHLPGWVLEP HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEECCCEEEECCCCCCCEECC AKGASILRQMIRARVIAAREAGRHEDSAALLEQGRTQGLELSGWHCGASLIAGLENALPE CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCC IEGQRIVSQGELGGAGLWLRAEPAAAPEQSAALARLIAQDLGE CCCCHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA