| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200313
Identifier: 87200313
GI number: 87200313
Start: 2440229
End: 2440579
Strand: Reverse
Name: 87200313
Synonym: Saro_2299
Alternate gene names: NA
Gene position: 2440579-2440229 (Counterclockwise)
Preceding gene: 87200314
Following gene: 87200312
Centisome position: 68.53
GC content: 63.53
Gene sequence:
>351_bases TTGAGCAATCTTGAAACCGCCAAGGCGATGATCGCCGCCTACAACGCGCAGGACGTGGACACCTACGTCTCGTACATGAC CGACGACGCCTGCGAGGCGAACTATCGCGGTGATGTGGTGCGCGAGGGCAAGGAAGGCACGCGTTCGGGCCTTGCCGCCG CGTTCGCGCGCTGGCCGCAGAACCATGCCGAGATCAAGGATGCGCAGCAGGTCGGCACCTACGTGCTGATGCGCGAGCAT GTGACGCGCGGCCCCGCCACCGATGGTTCGCCGCTGGTCGAGCCTTTCGACGTCGTCGCAGTCTATTCTTTCGAGGGCGA CAAGTGCTCTCGGGTGGAGTTTATCCGGTGA
Upstream 100 bases:
>100_bases GCCACCTCCAGGCAATGGACTTCATGTGCAAGGGTCACATGCTGCCCGACGCGACCGCCATCCTCGGCGCGATCGACGTG GTGTTCGGGGAGTGCGACCG
Downstream 100 bases:
>100_bases TCGCTGCGATGGCCCCTTCCAATCCCGTCACCCTGAACTTGTTTCAGGGTCCATCTTCCGGTTTGGGCCGGTGGGATTGG GTCAGCGCTCGGGGTGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MSNLETAKAMIAAYNAQDVDTYVSYMTDDACEANYRGDVVREGKEGTRSGLAAAFARWPQNHAEIKDAQQVGTYVLMREH VTRGPATDGSPLVEPFDVVAVYSFEGDKCSRVEFIR
Sequences:
>Translated_116_residues MSNLETAKAMIAAYNAQDVDTYVSYMTDDACEANYRGDVVREGKEGTRSGLAAAFARWPQNHAEIKDAQQVGTYVLMREH VTRGPATDGSPLVEPFDVVAVYSFEGDKCSRVEFIR >Mature_115_residues SNLETAKAMIAAYNAQDVDTYVSYMTDDACEANYRGDVVREGKEGTRSGLAAAFARWPQNHAEIKDAQQVGTYVLMREHV TRGPATDGSPLVEPFDVVAVYSFEGDKCSRVEFIR
Specific function: Unknown
COG id: COG4538
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12829; Mature: 12698
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLETAKAMIAAYNAQDVDTYVSYMTDDACEANYRGDVVREGKEGTRSGLAAAFARWPQ CCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHCCC NHAEIKDAQQVGTYVLMREHVTRGPATDGSPLVEPFDVVAVYSFEGDKCSRVEFIR CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCC >Mature Secondary Structure SNLETAKAMIAAYNAQDVDTYVSYMTDDACEANYRGDVVREGKEGTRSGLAAAFARWPQ CCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHCCC NHAEIKDAQQVGTYVLMREHVTRGPATDGSPLVEPFDVVAVYSFEGDKCSRVEFIR CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA