| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is sphX [H]
Identifier: 87200290
GI number: 87200290
Start: 2416941
End: 2418002
Strand: Direct
Name: sphX [H]
Synonym: Saro_2276
Alternate gene names: 87200290
Gene position: 2416941-2418002 (Clockwise)
Preceding gene: 87200289
Following gene: 87200291
Centisome position: 67.86
GC content: 63.09
Gene sequence:
>1062_bases ATGAAGGCTGAAACCATGTCGATGATTCGCAATATTGCGCTTGCCGCTACTGCCACTGCCGCTCTTGCCCTTGCCGGTTG CGGCTCGCAGGAAGGCGCGACCCGCGACCAGGTCCGCGCGGTCGGTTCCTCCACGGTCTATCCGTTTGCCAAGGCGGTCG CGGAATCGCTCGCCAAATCCGATGCCTCGCTGAAGTCGCCGATCATCGAATCGACCGGCACCGGTGCGGGCATGAAGCTG TTCTGCGCCGGCGTCGGCGCCCAGCACCCCGATATCGCCAATGCCTCGCGCCGGATGAAGAAGTCCGAATTCGAGGACTG CCAGAAGAACGGCGTGAAGGACATCGTCGAGATCCAGGTCGGCCTCGACGGCGTGGCCTTCGCCGAGGCGCAGAAGGGCC CCGGCATCGCGCTGACCCCCGAAGACGTCTACAAGGCGCTTGCCAAGAACCCCTATGGCAAGCCCAACGCCTTCAAGACC TGGAAGGACGTGAACCCCTCGCTGCCGGCAGAGCCGATCCTCGTCTACGGCCCGCCCTCGACCTCGGGCACGCGCGACGC GCTCAAGGAGCTGATCCTGATGAAGGGCTGCGACGAGAACGCCGAGATGAAGGCGCTCAAGGACAGCGACAAGGACAAGC ACGACAAGATCTGCGGCGAAGTGCGCGATGACGGCGCCTATGTCGACGCGGGCGAGAACGACAACCTGATCGTCCAGAAG ATCGAGGCGAACCCCAAGGCGATCGGCATCTTCGGCTTCTCGTATCTCGAAGAGAACAGCAGCCGCATCAAGGGCCTGAC GATGAAGGGCATCGCGCCGACCTATGCGACGATCTCGGACTTCACCTATCCGGGTGCGCGTCCGCTCTACATCTACGTCA AGAAGGCCCACCTCAAGGCCATTCCGGGCCTCCAGGCCTTCGTCACCGAATGGTCGAAGCTGTGGGGCAAGGACGGCTCG CTGGCGAAGCTCGGCATGGTGGTCGCACCTGACGATGTGCTTGCGGCCAGCGCCAAGGCTGTTACCGACCTGTCGGTCCT TGACGGTTCGCAGTTGAAGTAA
Upstream 100 bases:
>100_bases CCGTCAGATTGCCGATTGCAAACCTGCCCGCTGTTGCTGCAGCCTGACTGCTGTCATAAAGCTGTCATGCAACCGTCGCA TTGGCCCCCTGCCCACAGGG
Downstream 100 bases:
>100_bases GGGGGAAGTACCGGGATCATGTCGTCAGCCATCCTGCTTTTGCTCGCCTTCGGGCTGGGCCTTCTCGGCTGGCTGGCGGC GCGTTCCCGCGCGTGGGCCT
Product: phosphate binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MKAETMSMIRNIALAATATAALALAGCGSQEGATRDQVRAVGSSTVYPFAKAVAESLAKSDASLKSPIIESTGTGAGMKL FCAGVGAQHPDIANASRRMKKSEFEDCQKNGVKDIVEIQVGLDGVAFAEAQKGPGIALTPEDVYKALAKNPYGKPNAFKT WKDVNPSLPAEPILVYGPPSTSGTRDALKELILMKGCDENAEMKALKDSDKDKHDKICGEVRDDGAYVDAGENDNLIVQK IEANPKAIGIFGFSYLEENSSRIKGLTMKGIAPTYATISDFTYPGARPLYIYVKKAHLKAIPGLQAFVTEWSKLWGKDGS LAKLGMVVAPDDVLAASAKAVTDLSVLDGSQLK
Sequences:
>Translated_353_residues MKAETMSMIRNIALAATATAALALAGCGSQEGATRDQVRAVGSSTVYPFAKAVAESLAKSDASLKSPIIESTGTGAGMKL FCAGVGAQHPDIANASRRMKKSEFEDCQKNGVKDIVEIQVGLDGVAFAEAQKGPGIALTPEDVYKALAKNPYGKPNAFKT WKDVNPSLPAEPILVYGPPSTSGTRDALKELILMKGCDENAEMKALKDSDKDKHDKICGEVRDDGAYVDAGENDNLIVQK IEANPKAIGIFGFSYLEENSSRIKGLTMKGIAPTYATISDFTYPGARPLYIYVKKAHLKAIPGLQAFVTEWSKLWGKDGS LAKLGMVVAPDDVLAASAKAVTDLSVLDGSQLK >Mature_353_residues MKAETMSMIRNIALAATATAALALAGCGSQEGATRDQVRAVGSSTVYPFAKAVAESLAKSDASLKSPIIESTGTGAGMKL FCAGVGAQHPDIANASRRMKKSEFEDCQKNGVKDIVEIQVGLDGVAFAEAQKGPGIALTPEDVYKALAKNPYGKPNAFKT WKDVNPSLPAEPILVYGPPSTSGTRDALKELILMKGCDENAEMKALKDSDKDKHDKICGEVRDDGAYVDAGENDNLIVQK IEANPKAIGIFGFSYLEENSSRIKGLTMKGIAPTYATISDFTYPGARPLYIYVKKAHLKAIPGLQAFVTEWSKLWGKDGS LAKLGMVVAPDDVLAASAKAVTDLSVLDGSQLK
Specific function: May be involved in the system for phosphate transport across the cytoplasmic membrane [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell inner membrane. Note=Found in the cytoplasmic membrane in a form that is closely associated with the cell wall [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 37378; Mature: 37378
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAETMSMIRNIALAATATAALALAGCGSQEGATRDQVRAVGSSTVYPFAKAVAESLAKS CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHC DASLKSPIIESTGTGAGMKLFCAGVGAQHPDIANASRRMKKSEFEDCQKNGVKDIVEIQV CCHHHCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEE GLDGVAFAEAQKGPGIALTPEDVYKALAKNPYGKPNAFKTWKDVNPSLPAEPILVYGPPS CCCCEEEHHCCCCCCEEECHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCC TSGTRDALKELILMKGCDENAEMKALKDSDKDKHDKICGEVRDDGAYVDAGENDNLIVQK CCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCEEECCCCCCEEEEE IEANPKAIGIFGFSYLEENSSRIKGLTMKGIAPTYATISDFTYPGARPLYIYVKKAHLKA ECCCCCEEEEEEHHHHHCCCCHHCCEEECCCCCCHHHHHCCCCCCCCEEEEEEEEHHHHH IPGLQAFVTEWSKLWGKDGSLAKLGMVVAPDDVLAASAKAVTDLSVLDGSQLK CCCHHHHHHHHHHHHCCCCCEEHEEEEECCCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKAETMSMIRNIALAATATAALALAGCGSQEGATRDQVRAVGSSTVYPFAKAVAESLAKS CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHC DASLKSPIIESTGTGAGMKLFCAGVGAQHPDIANASRRMKKSEFEDCQKNGVKDIVEIQV CCHHHCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEE GLDGVAFAEAQKGPGIALTPEDVYKALAKNPYGKPNAFKTWKDVNPSLPAEPILVYGPPS CCCCEEEHHCCCCCCEEECHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCC TSGTRDALKELILMKGCDENAEMKALKDSDKDKHDKICGEVRDDGAYVDAGENDNLIVQK CCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCEEECCCCCCEEEEE IEANPKAIGIFGFSYLEENSSRIKGLTMKGIAPTYATISDFTYPGARPLYIYVKKAHLKA ECCCCCEEEEEEHHHHHCCCCHHCCEEECCCCCCHHHHHCCCCCCCCEEEEEEEEHHHHH IPGLQAFVTEWSKLWGKDGSLAKLGMVVAPDDVLAASAKAVTDLSVLDGSQLK CCCHHHHHHHHHHHHCCCCCEEHEEEEECCCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7741855 [H]