Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is sphX [H]

Identifier: 87200290

GI number: 87200290

Start: 2416941

End: 2418002

Strand: Direct

Name: sphX [H]

Synonym: Saro_2276

Alternate gene names: 87200290

Gene position: 2416941-2418002 (Clockwise)

Preceding gene: 87200289

Following gene: 87200291

Centisome position: 67.86

GC content: 63.09

Gene sequence:

>1062_bases
ATGAAGGCTGAAACCATGTCGATGATTCGCAATATTGCGCTTGCCGCTACTGCCACTGCCGCTCTTGCCCTTGCCGGTTG
CGGCTCGCAGGAAGGCGCGACCCGCGACCAGGTCCGCGCGGTCGGTTCCTCCACGGTCTATCCGTTTGCCAAGGCGGTCG
CGGAATCGCTCGCCAAATCCGATGCCTCGCTGAAGTCGCCGATCATCGAATCGACCGGCACCGGTGCGGGCATGAAGCTG
TTCTGCGCCGGCGTCGGCGCCCAGCACCCCGATATCGCCAATGCCTCGCGCCGGATGAAGAAGTCCGAATTCGAGGACTG
CCAGAAGAACGGCGTGAAGGACATCGTCGAGATCCAGGTCGGCCTCGACGGCGTGGCCTTCGCCGAGGCGCAGAAGGGCC
CCGGCATCGCGCTGACCCCCGAAGACGTCTACAAGGCGCTTGCCAAGAACCCCTATGGCAAGCCCAACGCCTTCAAGACC
TGGAAGGACGTGAACCCCTCGCTGCCGGCAGAGCCGATCCTCGTCTACGGCCCGCCCTCGACCTCGGGCACGCGCGACGC
GCTCAAGGAGCTGATCCTGATGAAGGGCTGCGACGAGAACGCCGAGATGAAGGCGCTCAAGGACAGCGACAAGGACAAGC
ACGACAAGATCTGCGGCGAAGTGCGCGATGACGGCGCCTATGTCGACGCGGGCGAGAACGACAACCTGATCGTCCAGAAG
ATCGAGGCGAACCCCAAGGCGATCGGCATCTTCGGCTTCTCGTATCTCGAAGAGAACAGCAGCCGCATCAAGGGCCTGAC
GATGAAGGGCATCGCGCCGACCTATGCGACGATCTCGGACTTCACCTATCCGGGTGCGCGTCCGCTCTACATCTACGTCA
AGAAGGCCCACCTCAAGGCCATTCCGGGCCTCCAGGCCTTCGTCACCGAATGGTCGAAGCTGTGGGGCAAGGACGGCTCG
CTGGCGAAGCTCGGCATGGTGGTCGCACCTGACGATGTGCTTGCGGCCAGCGCCAAGGCTGTTACCGACCTGTCGGTCCT
TGACGGTTCGCAGTTGAAGTAA

Upstream 100 bases:

>100_bases
CCGTCAGATTGCCGATTGCAAACCTGCCCGCTGTTGCTGCAGCCTGACTGCTGTCATAAAGCTGTCATGCAACCGTCGCA
TTGGCCCCCTGCCCACAGGG

Downstream 100 bases:

>100_bases
GGGGGAAGTACCGGGATCATGTCGTCAGCCATCCTGCTTTTGCTCGCCTTCGGGCTGGGCCTTCTCGGCTGGCTGGCGGC
GCGTTCCCGCGCGTGGGCCT

Product: phosphate binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MKAETMSMIRNIALAATATAALALAGCGSQEGATRDQVRAVGSSTVYPFAKAVAESLAKSDASLKSPIIESTGTGAGMKL
FCAGVGAQHPDIANASRRMKKSEFEDCQKNGVKDIVEIQVGLDGVAFAEAQKGPGIALTPEDVYKALAKNPYGKPNAFKT
WKDVNPSLPAEPILVYGPPSTSGTRDALKELILMKGCDENAEMKALKDSDKDKHDKICGEVRDDGAYVDAGENDNLIVQK
IEANPKAIGIFGFSYLEENSSRIKGLTMKGIAPTYATISDFTYPGARPLYIYVKKAHLKAIPGLQAFVTEWSKLWGKDGS
LAKLGMVVAPDDVLAASAKAVTDLSVLDGSQLK

Sequences:

>Translated_353_residues
MKAETMSMIRNIALAATATAALALAGCGSQEGATRDQVRAVGSSTVYPFAKAVAESLAKSDASLKSPIIESTGTGAGMKL
FCAGVGAQHPDIANASRRMKKSEFEDCQKNGVKDIVEIQVGLDGVAFAEAQKGPGIALTPEDVYKALAKNPYGKPNAFKT
WKDVNPSLPAEPILVYGPPSTSGTRDALKELILMKGCDENAEMKALKDSDKDKHDKICGEVRDDGAYVDAGENDNLIVQK
IEANPKAIGIFGFSYLEENSSRIKGLTMKGIAPTYATISDFTYPGARPLYIYVKKAHLKAIPGLQAFVTEWSKLWGKDGS
LAKLGMVVAPDDVLAASAKAVTDLSVLDGSQLK
>Mature_353_residues
MKAETMSMIRNIALAATATAALALAGCGSQEGATRDQVRAVGSSTVYPFAKAVAESLAKSDASLKSPIIESTGTGAGMKL
FCAGVGAQHPDIANASRRMKKSEFEDCQKNGVKDIVEIQVGLDGVAFAEAQKGPGIALTPEDVYKALAKNPYGKPNAFKT
WKDVNPSLPAEPILVYGPPSTSGTRDALKELILMKGCDENAEMKALKDSDKDKHDKICGEVRDDGAYVDAGENDNLIVQK
IEANPKAIGIFGFSYLEENSSRIKGLTMKGIAPTYATISDFTYPGARPLYIYVKKAHLKAIPGLQAFVTEWSKLWGKDGS
LAKLGMVVAPDDVLAASAKAVTDLSVLDGSQLK

Specific function: May be involved in the system for phosphate transport across the cytoplasmic membrane [H]

COG id: COG0226

COG function: function code P; ABC-type phosphate transport system, periplasmic component

Gene ontology:

Cell location: Cell inner membrane. Note=Found in the cytoplasmic membrane in a form that is closely associated with the cell wall [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011862
- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 37378; Mature: 37378

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAETMSMIRNIALAATATAALALAGCGSQEGATRDQVRAVGSSTVYPFAKAVAESLAKS
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHC
DASLKSPIIESTGTGAGMKLFCAGVGAQHPDIANASRRMKKSEFEDCQKNGVKDIVEIQV
CCHHHCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
GLDGVAFAEAQKGPGIALTPEDVYKALAKNPYGKPNAFKTWKDVNPSLPAEPILVYGPPS
CCCCEEEHHCCCCCCEEECHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCC
TSGTRDALKELILMKGCDENAEMKALKDSDKDKHDKICGEVRDDGAYVDAGENDNLIVQK
CCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCEEECCCCCCEEEEE
IEANPKAIGIFGFSYLEENSSRIKGLTMKGIAPTYATISDFTYPGARPLYIYVKKAHLKA
ECCCCCEEEEEEHHHHHCCCCHHCCEEECCCCCCHHHHHCCCCCCCCEEEEEEEEHHHHH
IPGLQAFVTEWSKLWGKDGSLAKLGMVVAPDDVLAASAKAVTDLSVLDGSQLK
CCCHHHHHHHHHHHHCCCCCEEHEEEEECCCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKAETMSMIRNIALAATATAALALAGCGSQEGATRDQVRAVGSSTVYPFAKAVAESLAKS
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHC
DASLKSPIIESTGTGAGMKLFCAGVGAQHPDIANASRRMKKSEFEDCQKNGVKDIVEIQV
CCHHHCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
GLDGVAFAEAQKGPGIALTPEDVYKALAKNPYGKPNAFKTWKDVNPSLPAEPILVYGPPS
CCCCEEEHHCCCCCCEEECHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCC
TSGTRDALKELILMKGCDENAEMKALKDSDKDKHDKICGEVRDDGAYVDAGENDNLIVQK
CCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCEEECCCCCCEEEEE
IEANPKAIGIFGFSYLEENSSRIKGLTMKGIAPTYATISDFTYPGARPLYIYVKKAHLKA
ECCCCCEEEEEEHHHHHCCCCHHCCEEECCCCCCHHHHHCCCCCCCCEEEEEEEEHHHHH
IPGLQAFVTEWSKLWGKDGSLAKLGMVVAPDDVLAASAKAVTDLSVLDGSQLK
CCCHHHHHHHHHHHHCCCCCEEHEEEEECCCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7741855 [H]