Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200285

Identifier: 87200285

GI number: 87200285

Start: 2410645

End: 2411385

Strand: Reverse

Name: 87200285

Synonym: Saro_2271

Alternate gene names: NA

Gene position: 2411385-2410645 (Counterclockwise)

Preceding gene: 87200286

Following gene: 87200284

Centisome position: 67.71

GC content: 66.26

Gene sequence:

>741_bases
GTGGACGCTAGTGATCAGTCGACCGACTGCGCGCCACTTGCTGCCCTTTTCTACGCGCCGGATGGGGTCCCTTCGCTGGC
GTCCATCCGGTCGGCGCTTTCGCCCGCCTTGCGCTTCTCGATCAGCAATGCGCCCGACGAATCGGAAGGCTGGGTCGAAC
TCCTGCGCGAAGGCCTGACGTTCGACCTGCGCGGCCTTGCTGGCGGGCCGCCGTGCGCCTTTCCGAATATCGGCGGCAGT
CTTGGCATCGGCGAAGCTGAAGTGCGGGCGCTGACGCCGCTTCTGCTTGCGCCCGGACCCCATCTGGCGGGCGCCGGGCG
GCTTCTTCCGGTGATTCGCGGCGCGGTCGGACTCCTCGTGGACCTCGCGCGAATCAGCGGCGCTGCGGCAATTTCGTGGC
TTCCCTCGCGTTCTGCGCTTGCGCCTGCCCTTTTCGAGAGGGCAGTGCAGCCCTGGCTGGACGGCGGACCCTTTCCCGCT
CTGGCGCTCACCGCGCTCCATCGCGAGGATGGCGGCGGGGTCCGTAGTGAGGGGCTCAAGTTCCTGATGGGGCAAGAGTT
TCTTCTCGAACCTAAACCTAGTTCCACAGGCGATCACACCCTGCGGGTTGCGGTGCGGCTGGTTGATTGGCTTGTCGCCC
ACGGGCCGGTCACTGCGCCGGTCGAGGCAATTCTTGCCGGAACGGGAGCAGTCCTTCTTGAGGCGCCCGAATGGGATCGT
ATCGTTGCGAGGTGCTGCTGA

Upstream 100 bases:

>100_bases
TCTCGCGCTATGATCGGTTACGGAGCATTCGTGATCTGGGCACGGACTCGACGGCAGTGCCGCGGTCGTGCAAATTCTCG
GCGGAACGAAAGGGATGAAC

Downstream 100 bases:

>100_bases
ACCGGAAAGACGTTGGGGAAAACCGCAGGATGCTGCCGTTCGGCAGCGTCAACGTCCCCGGTCAGCCTGGCTACTCGCCC
GATCTGCAGCGCCATCATAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MDASDQSTDCAPLAALFYAPDGVPSLASIRSALSPALRFSISNAPDESEGWVELLREGLTFDLRGLAGGPPCAFPNIGGS
LGIGEAEVRALTPLLLAPGPHLAGAGRLLPVIRGAVGLLVDLARISGAAAISWLPSRSALAPALFERAVQPWLDGGPFPA
LALTALHREDGGGVRSEGLKFLMGQEFLLEPKPSSTGDHTLRVAVRLVDWLVAHGPVTAPVEAILAGTGAVLLEAPEWDR
IVARCC

Sequences:

>Translated_246_residues
MDASDQSTDCAPLAALFYAPDGVPSLASIRSALSPALRFSISNAPDESEGWVELLREGLTFDLRGLAGGPPCAFPNIGGS
LGIGEAEVRALTPLLLAPGPHLAGAGRLLPVIRGAVGLLVDLARISGAAAISWLPSRSALAPALFERAVQPWLDGGPFPA
LALTALHREDGGGVRSEGLKFLMGQEFLLEPKPSSTGDHTLRVAVRLVDWLVAHGPVTAPVEAILAGTGAVLLEAPEWDR
IVARCC
>Mature_246_residues
MDASDQSTDCAPLAALFYAPDGVPSLASIRSALSPALRFSISNAPDESEGWVELLREGLTFDLRGLAGGPPCAFPNIGGS
LGIGEAEVRALTPLLLAPGPHLAGAGRLLPVIRGAVGLLVDLARISGAAAISWLPSRSALAPALFERAVQPWLDGGPFPA
LALTALHREDGGGVRSEGLKFLMGQEFLLEPKPSSTGDHTLRVAVRLVDWLVAHGPVTAPVEAILAGTGAVLLEAPEWDR
IVARCC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25500; Mature: 25500

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDASDQSTDCAPLAALFYAPDGVPSLASIRSALSPALRFSISNAPDESEGWVELLREGLT
CCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHCCC
FDLRGLAGGPPCAFPNIGGSLGIGEAEVRALTPLLLAPGPHLAGAGRLLPVIRGAVGLLV
EEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
DLARISGAAAISWLPSRSALAPALFERAVQPWLDGGPFPALALTALHREDGGGVRSEGLK
HHHHHCCCHHEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHH
FLMGQEFLLEPKPSSTGDHTLRVAVRLVDWLVAHGPVTAPVEAILAGTGAVLLEAPEWDR
HHHCCHHEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCHHH
IVARCC
HHHHCC
>Mature Secondary Structure
MDASDQSTDCAPLAALFYAPDGVPSLASIRSALSPALRFSISNAPDESEGWVELLREGLT
CCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHCCC
FDLRGLAGGPPCAFPNIGGSLGIGEAEVRALTPLLLAPGPHLAGAGRLLPVIRGAVGLLV
EEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
DLARISGAAAISWLPSRSALAPALFERAVQPWLDGGPFPALALTALHREDGGGVRSEGLK
HHHHHCCCHHEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHH
FLMGQEFLLEPKPSSTGDHTLRVAVRLVDWLVAHGPVTAPVEAILAGTGAVLLEAPEWDR
HHHCCHHEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCHHH
IVARCC
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA