Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200228

Identifier: 87200228

GI number: 87200228

Start: 2356571

End: 2356927

Strand: Reverse

Name: 87200228

Synonym: Saro_2213

Alternate gene names: NA

Gene position: 2356927-2356571 (Counterclockwise)

Preceding gene: 87200230

Following gene: 87200227

Centisome position: 66.18

GC content: 62.75

Gene sequence:

>357_bases
ATGGTTCAGTGTTTAGCATCTTCTCTCGATCGCTCCTTCGCGGCGCTGTCCGATGGGACCCGCCGCGACATCATCGATCA
GCTCGGCCAGGCCGAAGCGTCGGTCACCAGCCTTGCTGACCGTTTCCGGATGACGCCTACGGGCATGAAGAAGCATCTCC
AGGTGCTGGAACGGGCAGGGCTCGTCGTTACCCGCAAGGTCGGGCGCGTCAGGATATGCAGGCTCGGCACGCGCGGGCTC
GATGCGGAGGCGGCGTGGATCGAGGCGCACCGCAAGCTGTTCGAAGCCCGCTTTGAGGCACTGGACGGGATTCTCGGTGA
AATGAAAGCGGAGGAACGCGATGGACAGTCAGTCTGA

Upstream 100 bases:

>100_bases
CCGGCAAAGCGGTAGGCCGGTTCACCCCTTTGCGGAATTGACCTTTGCGTCAGGCACGGCGCTTGCGCCGCAGGCATCGT
CGCGCTAAACACTGAACCAT

Downstream 100 bases:

>100_bases
AAATGGAAGCGGCGCGGGCAACCGCACATCGATCGAGCGCAGGGGCGATCGCGAGCTCGTCGTGACGCGGACATTCGATG
CGCCGCGCGCGATGGTCTAC

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator ArsR Family; Regulatory Protein ArsR; Transcriptional Regulator; Transcriptional Regulator ArsR Family Protein; Transcription Regulator ArsR; ArsR Family Transcriptional Regulatory Protein; Transcriptional Regulator Protein; Arsenical Resistance Operon Repressor; ArsR Family Regulatory; Transcriptional Regulator Protein ArsR Family; Transcriptional Regulatory Protein; Transcriptional Regulator TrmB; Transcriptional Regulatory ArsR Family; Transcriptional Regulator Arsr Family; Arsr Family Transcriptional Regulator; Transcription Regulator; Transcriptional Regulatory Protein Asrr; Transcriptional Regulator ArsR-Family; Xin-Antitoxin System Antitoxin Component ArsR Family; HTH Family Transcriptional Regulator

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MVQCLASSLDRSFAALSDGTRRDIIDQLGQAEASVTSLADRFRMTPTGMKKHLQVLERAGLVVTRKVGRVRICRLGTRGL
DAEAAWIEAHRKLFEARFEALDGILGEMKAEERDGQSV

Sequences:

>Translated_118_residues
MVQCLASSLDRSFAALSDGTRRDIIDQLGQAEASVTSLADRFRMTPTGMKKHLQVLERAGLVVTRKVGRVRICRLGTRGL
DAEAAWIEAHRKLFEARFEALDGILGEMKAEERDGQSV
>Mature_118_residues
MVQCLASSLDRSFAALSDGTRRDIIDQLGQAEASVTSLADRFRMTPTGMKKHLQVLERAGLVVTRKVGRVRICRLGTRGL
DAEAAWIEAHRKLFEARFEALDGILGEMKAEERDGQSV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13058; Mature: 13058

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQCLASSLDRSFAALSDGTRRDIIDQLGQAEASVTSLADRFRMTPTGMKKHLQVLERAG
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
LVVTRKVGRVRICRLGTRGLDAEAAWIEAHRKLFEARFEALDGILGEMKAEERDGQSV
HHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVQCLASSLDRSFAALSDGTRRDIIDQLGQAEASVTSLADRFRMTPTGMKKHLQVLERAG
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
LVVTRKVGRVRICRLGTRGLDAEAAWIEAHRKLFEARFEALDGILGEMKAEERDGQSV
HHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA