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The map label for this gene is smf [H]

Identifier: 87200214

GI number: 87200214

Start: 2339884

End: 2340771

Strand: Direct

Name: smf [H]

Synonym: Saro_2199

Alternate gene names: 87200214

Gene position: 2339884-2340771 (Clockwise)

Preceding gene: 87200212

Following gene: 87200215

Centisome position: 65.7

GC content: 64.75

Gene sequence:

>888_bases
ATGCGTCTCGCCCTAAACGATTCAGGGCCAGCGCTGGCGCCAATCTCGCCGCGCCGAGAGCTCGGCGCCTATGAGGCCCT
GTGGCTCGAAAAGGGGGCGACCTTCAAAACCCTGGCCGATCGCTTTGCGCTCGATGCCGAAGCGCTTCCGTCCGACTTCG
TGCCCGCCCAGCTTGCCGAGCAGTGCGCGGCCGAGGTGATGGCAAAGCTCAAGAAGGCCGGTGTCCATCAGTTTGGCGTC
CGCATCCATCATGCCGGTGACTATCCCGCAAAGCTGCGCGACGCGCGCCACCCAGTCGAGCTTCTCTATTATCGCGGCGC
CTGGGAGATCACCGAAACCCGGTGCGTGGCCGTCGTCGGAAGCCGCGAGGCCTCGCCCGACGGTATCCGTCGCGCCGAGC
GGCTTGCGCGCGAACTCGTCGATCGCGATTTCACGGTCGTCTCTGGCCTTGCCAAGGGCGTCGATTCGGCTGCCCATCGC
GGCGCGATCGCGCGCGGTGGACGCACCATTTCCGTGATCGGGACGCCGCTTGGATCCTGCTACCCCAAGGAGAATGCCGA
TCTGCAAGAGGAGATCGCCCGCGATCATCTGCTGATCTCGCAGGTGCCGGTTCTTCGCTACGCCAAGCAAGCACCCCAGC
ATAACCGCCTTTTCTTCCCCGAGCGCAATGTCACGATGAGCGCTCTCACCGAGGGCACGATCATCGTCGAGGCTGGCGAT
ACGTCGGGCACGCTGACCCAGGCGCGCGCCGCGCTCCATCAGGGCCGCAAGCTCTTCATTCTCGACAATTGCTTTCAGCG
GACGGACATCACGTGGCCAGCCCGCTTCGAAGCCGAAGGTGCAGTGCGCGTGAAGACGCCCGACGACATCTGGAGCGCCC
TTGGTTGA

Upstream 100 bases:

>100_bases
CGTCCTTGGCTTCACATCTGTCAAGCCGAGGCTGGCACCGAGGGGAAGGACAAGCCTGGATGGGACACATATATTCAACC
GACGCAAGGGCCGCATAAGC

Downstream 100 bases:

>100_bases
CGGTGTCCGGCTCTCGCAGATCGATGAGACGAGCCGCGGGGATCATTATCACCTGACGGCCGAGGATCGGTGCTACTATC
TCTACGAATATACCTCGCAC

Product: SMF protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MRLALNDSGPALAPISPRRELGAYEALWLEKGATFKTLADRFALDAEALPSDFVPAQLAEQCAAEVMAKLKKAGVHQFGV
RIHHAGDYPAKLRDARHPVELLYYRGAWEITETRCVAVVGSREASPDGIRRAERLARELVDRDFTVVSGLAKGVDSAAHR
GAIARGGRTISVIGTPLGSCYPKENADLQEEIARDHLLISQVPVLRYAKQAPQHNRLFFPERNVTMSALTEGTIIVEAGD
TSGTLTQARAALHQGRKLFILDNCFQRTDITWPARFEAEGAVRVKTPDDIWSALG

Sequences:

>Translated_295_residues
MRLALNDSGPALAPISPRRELGAYEALWLEKGATFKTLADRFALDAEALPSDFVPAQLAEQCAAEVMAKLKKAGVHQFGV
RIHHAGDYPAKLRDARHPVELLYYRGAWEITETRCVAVVGSREASPDGIRRAERLARELVDRDFTVVSGLAKGVDSAAHR
GAIARGGRTISVIGTPLGSCYPKENADLQEEIARDHLLISQVPVLRYAKQAPQHNRLFFPERNVTMSALTEGTIIVEAGD
TSGTLTQARAALHQGRKLFILDNCFQRTDITWPARFEAEGAVRVKTPDDIWSALG
>Mature_295_residues
MRLALNDSGPALAPISPRRELGAYEALWLEKGATFKTLADRFALDAEALPSDFVPAQLAEQCAAEVMAKLKKAGVHQFGV
RIHHAGDYPAKLRDARHPVELLYYRGAWEITETRCVAVVGSREASPDGIRRAERLARELVDRDFTVVSGLAKGVDSAAHR
GAIARGGRTISVIGTPLGSCYPKENADLQEEIARDHLLISQVPVLRYAKQAPQHNRLFFPERNVTMSALTEGTIIVEAGD
TSGTLTQARAALHQGRKLFILDNCFQRTDITWPARFEAEGAVRVKTPDDIWSALG

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=212, Percent_Identity=32.5471698113208, Blast_Score=97, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 32331; Mature: 32331

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLALNDSGPALAPISPRRELGAYEALWLEKGATFKTLADRFALDAEALPSDFVPAQLAE
CEEEECCCCCEECCCCCHHHHCCHHHHHHCCCCHHHHHHHHHHCCHHHCCCCCCHHHHHH
QCAAEVMAKLKKAGVHQFGVRIHHAGDYPAKLRDARHPVELLYYRGAWEITETRCVAVVG
HHHHHHHHHHHHCCCHHHCEEEEECCCCCHHHHCCCCCEEEEEECCCEEECCCEEEEEEC
SREASPDGIRRAERLARELVDRDFTVVSGLAKGVDSAAHRGAIARGGRTISVIGTPLGSC
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHCCCCEEEEEECCCCCC
YPKENADLQEEIARDHLLISQVPVLRYAKQAPQHNRLFFPERNVTMSALTEGTIIVEAGD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEECCCEEEEEECC
TSGTLTQARAALHQGRKLFILDNCFQRTDITWPARFEAEGAVRVKTPDDIWSALG
CCCHHHHHHHHHHCCCEEEEEECCHHHCCCCCCCEECCCCEEEECCCHHHHHHCC
>Mature Secondary Structure
MRLALNDSGPALAPISPRRELGAYEALWLEKGATFKTLADRFALDAEALPSDFVPAQLAE
CEEEECCCCCEECCCCCHHHHCCHHHHHHCCCCHHHHHHHHHHCCHHHCCCCCCHHHHHH
QCAAEVMAKLKKAGVHQFGVRIHHAGDYPAKLRDARHPVELLYYRGAWEITETRCVAVVG
HHHHHHHHHHHHCCCHHHCEEEEECCCCCHHHHCCCCCEEEEEECCCEEECCCEEEEEEC
SREASPDGIRRAERLARELVDRDFTVVSGLAKGVDSAAHRGAIARGGRTISVIGTPLGSC
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHCCCCEEEEEECCCCCC
YPKENADLQEEIARDHLLISQVPVLRYAKQAPQHNRLFFPERNVTMSALTEGTIIVEAGD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEECCCEEEEEECC
TSGTLTQARAALHQGRKLFILDNCFQRTDITWPARFEAEGAVRVKTPDDIWSALG
CCCHHHHHHHHHHCCCEEEEEECCHHHCCCCCCCEECCCCEEEECCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]