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The map label for this gene is yubM [H]

Identifier: 87200213

GI number: 87200213

Start: 2337477

End: 2339465

Strand: Reverse

Name: yubM [H]

Synonym: Saro_2198

Alternate gene names: 87200213

Gene position: 2339465-2337477 (Counterclockwise)

Preceding gene: 87200218

Following gene: 87200211

Centisome position: 65.69

GC content: 64.45

Gene sequence:

>1989_bases
ATGATCAAGTCGATCCCGCTGAACAAGCTCGTCCAGTCTCCCCGCAATGTCCGCCGTCACACTGACCCGGCAGCAGATGC
TGAACTTAAGGCCAGCATCGCTGCCCATGGGCTGCTGCAGAATCTCATTGTCCGGCCTGCCGCGAAGGGCAAATTCGAGG
TCGAAGCCGGCGAGCGCCGCCGCCGCGTAATGCTGGCGCTCACGGATGAAAAGATCCTCGCGCGTGATCACGAAGTCACG
TGCCTCGTGCTCGCGGACAGCGCTGAAGCGGCCGTCGAGACCAGCCTCGCGGAAAACTTCCACCGCCTCGCCATGAACCC
GGCCGACGAAGCCCAGGCCTTTGCGGCGCTCGTGGCAGGCGGTGCGACCGTCGAGGACGTTGCTCGCCGCTTCGGTCTGA
CCATTCGCTTCGTTGATGGCCGGCTGCGTCTCGCGAACCTTGCGCCTGTGGTGTTTGAGGCACTGGCATCCGGGGAAATC
ACCCTCGATATCGCCAAGGCCTTCGGCGCGACCTCGGACCAGGACATCCAGGCCCGTGTCTTCGAGCAGGTTTCCTCGGC
CTACTACGCACCCAATCCTGACAGCATCCGGCGCATGGTCCTCTCGGGCACTGTCCGGGGCAGCGATCCGCGCGCCCGTC
TCGTTGGCCGCGATGCCTACATTGCCGCGGGCGGCCGGATCGAGCGTGAACTGTTCGACAACGACGACAGCGAATCCTGG
GTCGATTTTGCGCTGCTCGAAAGCCTTGCCGCCGCGAAGATGGAAGAGCAGGCCAAAGCTCTCGCCGCCGAGCAGGGTCT
TGCCTGGGTCAAGCCGACGCTCGATCCCTATGCCAGCCACGATCTGGTCGAAGGGCTGGTCCGGCTTCCTGCCGAACAGG
CGCCATTGACCGACGCAGAATTGGCGAGGCTCGACGAACTCGATGCCTCCTATGACGAGCATGCGGCGATCCTCGAGGAT
GAGGACAGTGCCGAGGAGGCGGTGGCAGCCGCCGAAGCGGCGATCGAGGCGATAGAACGCGAATGCCAGGAAATCCGAGC
TCGCCCGCCCGTCATCGCAGCTGACCTCAAGGCCGAAGCAGGTATGATCCTGGTGCTATCGCGCGATGGCACGCCGGTTC
TCCAGCCGGTGTTCTATGGCGAGCGTCAGGCTGAACCCGCAGAACCCGATGACGGGATCGAAGTCGTTGCAGGCGAAGAA
GGTTCGGACAGGCGTCGGACCACCTTGTCGAAACGTCTGGTTGACGAACTTGCGATGCAGCGCCGCGATGTTCTGGCACT
TCACGTTGCATCCGATCCCGGGCTGGCGCTCGACATCATGATCTCCACCCTCGCCGATGCCGATACCCACGATTGGTGGG
CGCGCCCTTCGACCACGCTACGCGCGCCAGTTCCGGCAGGCCCGATCATCGGCTTCGAAGCCAAGGATGCGCCGGCGAGC
AGCGCGCTTGCTGAGTTCAGATCCGGCCTCGACGAAAGCTGGCGTGCCGGTTCCGAAGCGACGTCCCGCTTCGATCTCTT
CCGTGCGCTGCCCGATGACAGCCGCGCGGCCTGGCTGGGCTATGTCGTCGCCCGTTCGCTCGAGGCAAGCCTCAACATGG
CGGGAGAGCGTCAGCTGCCGTTCCAGGACCATCTCGGCAGCCTGATCGGTATCGACATGGCGCAGTGGTGGCGACCGACA
GCAGCCAACTACTTCGACCGGGTATCGAAGCAGGTGATCCTCGACGCGCTGACCGATGTCGGCGGCATCGAGCTCTCCTC
GCGCTTTGCCTCGGTCAAAAAAGGTGATCTCGCGATGAGCGCCGAGCGCGTCTTCGCCGGCACCTACATCACCGAGGTCG
AGGTCCGCGAAAAGGCCCTGGCCTGGGTGCCTGAGGTCATGCGGTTTGCCTCCGCTGCCCCGGAGGCTGGCGAAGCCGAG
ATCGACGCAAGCGACGCTGAGCCTGGTGTCGACGGCGAAACTCATACCCCCCACGAGCTGGCCGCCTGA

Upstream 100 bases:

>100_bases
ATCTGCTACGACCGCATGAGAGTGGAGTGGGCTTTGCCCTGATTGAGCCATTTGGGCGTCGATGGTCGATGCACAAGGCT
CACAATCAGGAGTGTGTCCG

Downstream 100 bases:

>100_bases
CCTCCTCCTGACAGGCTCGGCCACTCGCACCTCGAGAAGCGGTCCTTCGGCTCACGCCGTAGGGCCGCTTCCTTTTTGGG
AGAAGAGCAGAGGGGGCTCG

Product: ParB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 662; Mature: 662

Protein sequence:

>662_residues
MIKSIPLNKLVQSPRNVRRHTDPAADAELKASIAAHGLLQNLIVRPAAKGKFEVEAGERRRRVMLALTDEKILARDHEVT
CLVLADSAEAAVETSLAENFHRLAMNPADEAQAFAALVAGGATVEDVARRFGLTIRFVDGRLRLANLAPVVFEALASGEI
TLDIAKAFGATSDQDIQARVFEQVSSAYYAPNPDSIRRMVLSGTVRGSDPRARLVGRDAYIAAGGRIERELFDNDDSESW
VDFALLESLAAAKMEEQAKALAAEQGLAWVKPTLDPYASHDLVEGLVRLPAEQAPLTDAELARLDELDASYDEHAAILED
EDSAEEAVAAAEAAIEAIERECQEIRARPPVIAADLKAEAGMILVLSRDGTPVLQPVFYGERQAEPAEPDDGIEVVAGEE
GSDRRRTTLSKRLVDELAMQRRDVLALHVASDPGLALDIMISTLADADTHDWWARPSTTLRAPVPAGPIIGFEAKDAPAS
SALAEFRSGLDESWRAGSEATSRFDLFRALPDDSRAAWLGYVVARSLEASLNMAGERQLPFQDHLGSLIGIDMAQWWRPT
AANYFDRVSKQVILDALTDVGGIELSSRFASVKKGDLAMSAERVFAGTYITEVEVREKALAWVPEVMRFASAAPEAGEAE
IDASDAEPGVDGETHTPHELAA

Sequences:

>Translated_662_residues
MIKSIPLNKLVQSPRNVRRHTDPAADAELKASIAAHGLLQNLIVRPAAKGKFEVEAGERRRRVMLALTDEKILARDHEVT
CLVLADSAEAAVETSLAENFHRLAMNPADEAQAFAALVAGGATVEDVARRFGLTIRFVDGRLRLANLAPVVFEALASGEI
TLDIAKAFGATSDQDIQARVFEQVSSAYYAPNPDSIRRMVLSGTVRGSDPRARLVGRDAYIAAGGRIERELFDNDDSESW
VDFALLESLAAAKMEEQAKALAAEQGLAWVKPTLDPYASHDLVEGLVRLPAEQAPLTDAELARLDELDASYDEHAAILED
EDSAEEAVAAAEAAIEAIERECQEIRARPPVIAADLKAEAGMILVLSRDGTPVLQPVFYGERQAEPAEPDDGIEVVAGEE
GSDRRRTTLSKRLVDELAMQRRDVLALHVASDPGLALDIMISTLADADTHDWWARPSTTLRAPVPAGPIIGFEAKDAPAS
SALAEFRSGLDESWRAGSEATSRFDLFRALPDDSRAAWLGYVVARSLEASLNMAGERQLPFQDHLGSLIGIDMAQWWRPT
AANYFDRVSKQVILDALTDVGGIELSSRFASVKKGDLAMSAERVFAGTYITEVEVREKALAWVPEVMRFASAAPEAGEAE
IDASDAEPGVDGETHTPHELAA
>Mature_662_residues
MIKSIPLNKLVQSPRNVRRHTDPAADAELKASIAAHGLLQNLIVRPAAKGKFEVEAGERRRRVMLALTDEKILARDHEVT
CLVLADSAEAAVETSLAENFHRLAMNPADEAQAFAALVAGGATVEDVARRFGLTIRFVDGRLRLANLAPVVFEALASGEI
TLDIAKAFGATSDQDIQARVFEQVSSAYYAPNPDSIRRMVLSGTVRGSDPRARLVGRDAYIAAGGRIERELFDNDDSESW
VDFALLESLAAAKMEEQAKALAAEQGLAWVKPTLDPYASHDLVEGLVRLPAEQAPLTDAELARLDELDASYDEHAAILED
EDSAEEAVAAAEAAIEAIERECQEIRARPPVIAADLKAEAGMILVLSRDGTPVLQPVFYGERQAEPAEPDDGIEVVAGEE
GSDRRRTTLSKRLVDELAMQRRDVLALHVASDPGLALDIMISTLADADTHDWWARPSTTLRAPVPAGPIIGFEAKDAPAS
SALAEFRSGLDESWRAGSEATSRFDLFRALPDDSRAAWLGYVVARSLEASLNMAGERQLPFQDHLGSLIGIDMAQWWRPT
AANYFDRVSKQVILDALTDVGGIELSSRFASVKKGDLAMSAERVFAGTYITEVEVREKALAWVPEVMRFASAAPEAGEAE
IDASDAEPGVDGETHTPHELAA

Specific function: Unknown

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 71592; Mature: 71592

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKSIPLNKLVQSPRNVRRHTDPAADAELKASIAAHGLLQNLIVRPAAKGKFEVEAGERR
CCCCCCHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCC
RRVMLALTDEKILARDHEVTCLVLADSAEAAVETSLAENFHRLAMNPADEAQAFAALVAG
CEEEEEEECCHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
GATVEDVARRFGLTIRFVDGRLRLANLAPVVFEALASGEITLDIAKAFGATSDQDIQARV
CCCHHHHHHHHCCEEEEECCEEEEHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCHHHHHH
FEQVSSAYYAPNPDSIRRMVLSGTVRGSDPRARLVGRDAYIAAGGRIERELFDNDDSESW
HHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHEECCCEEEECCCCEEHHHCCCCCCHHH
VDFALLESLAAAKMEEQAKALAAEQGLAWVKPTLDPYASHDLVEGLVRLPAEQAPLTDAE
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCCCHHH
LARLDELDASYDEHAAILEDEDSAEEAVAAAEAAIEAIERECQEIRARPPVIAADLKAEA
HHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC
GMILVLSRDGTPVLQPVFYGERQAEPAEPDDGIEVVAGEEGSDRRRTTLSKRLVDELAMQ
CEEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHH
RRDVLALHVASDPGLALDIMISTLADADTHDWWARPSTTLRAPVPAGPIIGFEAKDAPAS
HCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCEEECCCCCCCHH
SALAEFRSGLDESWRAGSEATSRFDLFRALPDDSRAAWLGYVVARSLEASLNMAGERQLP
HHHHHHHHCCCHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
FQDHLGSLIGIDMAQWWRPTAANYFDRVSKQVILDALTDVGGIELSSRFASVKKGDLAMS
HHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHH
AERVFAGTYITEVEVREKALAWVPEVMRFASAAPEAGEAEIDASDAEPGVDGETHTPHEL
HHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
AA
CC
>Mature Secondary Structure
MIKSIPLNKLVQSPRNVRRHTDPAADAELKASIAAHGLLQNLIVRPAAKGKFEVEAGERR
CCCCCCHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCC
RRVMLALTDEKILARDHEVTCLVLADSAEAAVETSLAENFHRLAMNPADEAQAFAALVAG
CEEEEEEECCHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
GATVEDVARRFGLTIRFVDGRLRLANLAPVVFEALASGEITLDIAKAFGATSDQDIQARV
CCCHHHHHHHHCCEEEEECCEEEEHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCHHHHHH
FEQVSSAYYAPNPDSIRRMVLSGTVRGSDPRARLVGRDAYIAAGGRIERELFDNDDSESW
HHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHEECCCEEEECCCCEEHHHCCCCCCHHH
VDFALLESLAAAKMEEQAKALAAEQGLAWVKPTLDPYASHDLVEGLVRLPAEQAPLTDAE
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCCCHHH
LARLDELDASYDEHAAILEDEDSAEEAVAAAEAAIEAIERECQEIRARPPVIAADLKAEA
HHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC
GMILVLSRDGTPVLQPVFYGERQAEPAEPDDGIEVVAGEEGSDRRRTTLSKRLVDELAMQ
CEEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHH
RRDVLALHVASDPGLALDIMISTLADADTHDWWARPSTTLRAPVPAGPIIGFEAKDAPAS
HCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCEEECCCCCCCHH
SALAEFRSGLDESWRAGSEATSRFDLFRALPDDSRAAWLGYVVARSLEASLNMAGERQLP
HHHHHHHHCCCHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
FQDHLGSLIGIDMAQWWRPTAANYFDRVSKQVILDALTDVGGIELSSRFASVKKGDLAMS
HHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHH
AERVFAGTYITEVEVREKALAWVPEVMRFASAAPEAGEAEIDASDAEPGVDGETHTPHEL
HHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
AA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9722640; 9628576 [H]