Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200192

Identifier: 87200192

GI number: 87200192

Start: 2320276

End: 2321145

Strand: Reverse

Name: 87200192

Synonym: Saro_2176

Alternate gene names: NA

Gene position: 2321145-2320276 (Counterclockwise)

Preceding gene: 87200193

Following gene: 87200191

Centisome position: 65.17

GC content: 57.59

Gene sequence:

>870_bases
ATGGACAGCGATTCGGGATTGCGACGCGGGGTTGAGAGCCGCCTCGAATTCATCGAATTTAGGCTCTTCTGGGAAGGGCA
TGTCAACCGGAGTGACCTGATCGAAGTTTTCGGCGTTTCGATCAACCAAGCTTCGACGGATCTGAACAGATATCTCGGCC
TGGCTGAAGCCAACATGGTCTACGACAAGAGCGCCAGGACTTATGTTCGTAGCTCGACATTCACGCCCGTATTTCACCAG
CCCGACGCATCCCAATATCTCTCCCAGCTCAGATCGCTCTCGGATGGGATCATTGCCGCCGACGACAGCTGGATCGGAGG
TTTGCCGAGTTTCGCCTGTGTCCCGACTCCCGCCCGCGGTGTCTCGTCCAAAATTCTGAGGGCCATCGTAACGGCGATCA
AGCGGCACGAGGCGATCGAGGTTTTCTACCAATCGATGTCATCCCCTGAGCCCGCTTGGCGGTGGATCGAACCTCATGCC
TTGGTGTTTGACGGCTTCAGATGGCATGCTCGGGCGCATTGCCCACGCAGTAGCGCCTTCAAGGATTTTGTTCTCTCGCG
CATCACCGATACGCGTTCATCAAAGCCGGCAGAAGCTAGGCCTTCCGGCGATCGCGAATGGGAGGAGCATGTTGAGCTGC
AGATCGCGCCTCATCCCGCGCTGAGCGCTGGTCAGCGCAAGGCGATCGAGCTCGATTACGGAATGGAAAGGGGCGTGACG
ACCATCCCGGTGCGGCGGGCTCTCCTCTACTACGCATTGAAGCGCCTTGGATTGGATACCGATCCGGCAGCACGTAGCCC
CCAGGACCAGCAGATTGTTCTATTGAACTGCCGCAACATCGACATCGGTTCGAAGGGTGTCATCGAATAG

Upstream 100 bases:

>100_bases
GGGCAAGCAGCTTTCCGAATCTCGTTGCCTCGCCATCAAGCATCCACTACGCTTACCCATACAGAAACTGGTTTAGCCCA
GTTTCTTGGGGGATCTGGCG

Downstream 100 bases:

>100_bases
TGCTATACATCGGATTTTTGTTTCGGATTTCTATTAAGTTTCCGCCATTCTAATCTGTGTCTGGTTCGAGTTTGTGTAAA
TCTGCCTCGCATCGGTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MDSDSGLRRGVESRLEFIEFRLFWEGHVNRSDLIEVFGVSINQASTDLNRYLGLAEANMVYDKSARTYVRSSTFTPVFHQ
PDASQYLSQLRSLSDGIIAADDSWIGGLPSFACVPTPARGVSSKILRAIVTAIKRHEAIEVFYQSMSSPEPAWRWIEPHA
LVFDGFRWHARAHCPRSSAFKDFVLSRITDTRSSKPAEARPSGDREWEEHVELQIAPHPALSAGQRKAIELDYGMERGVT
TIPVRRALLYYALKRLGLDTDPAARSPQDQQIVLLNCRNIDIGSKGVIE

Sequences:

>Translated_289_residues
MDSDSGLRRGVESRLEFIEFRLFWEGHVNRSDLIEVFGVSINQASTDLNRYLGLAEANMVYDKSARTYVRSSTFTPVFHQ
PDASQYLSQLRSLSDGIIAADDSWIGGLPSFACVPTPARGVSSKILRAIVTAIKRHEAIEVFYQSMSSPEPAWRWIEPHA
LVFDGFRWHARAHCPRSSAFKDFVLSRITDTRSSKPAEARPSGDREWEEHVELQIAPHPALSAGQRKAIELDYGMERGVT
TIPVRRALLYYALKRLGLDTDPAARSPQDQQIVLLNCRNIDIGSKGVIE
>Mature_289_residues
MDSDSGLRRGVESRLEFIEFRLFWEGHVNRSDLIEVFGVSINQASTDLNRYLGLAEANMVYDKSARTYVRSSTFTPVFHQ
PDASQYLSQLRSLSDGIIAADDSWIGGLPSFACVPTPARGVSSKILRAIVTAIKRHEAIEVFYQSMSSPEPAWRWIEPHA
LVFDGFRWHARAHCPRSSAFKDFVLSRITDTRSSKPAEARPSGDREWEEHVELQIAPHPALSAGQRKAIELDYGMERGVT
TIPVRRALLYYALKRLGLDTDPAARSPQDQQIVLLNCRNIDIGSKGVIE

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32473; Mature: 32473

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSDSGLRRGVESRLEFIEFRLFWEGHVNRSDLIEVFGVSINQASTDLNRYLGLAEANMV
CCCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHE
YDKSARTYVRSSTFTPVFHQPDASQYLSQLRSLSDGIIAADDSWIGGLPSFACVPTPARG
ECCCHHHHHHCCCCCCEEECCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCC
VSSKILRAIVTAIKRHEAIEVFYQSMSSPEPAWRWIEPHALVFDGFRWHARAHCPRSSAF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEECCEEEEHHCCCCCHHHH
KDFVLSRITDTRSSKPAEARPSGDREWEEHVELQIAPHPALSAGQRKAIELDYGMERGVT
HHHHHHHHHHCCCCCCCCCCCCCCCCHHHCEEEEECCCCCCCCCCCEEEEECCCCCCCCE
TIPVRRALLYYALKRLGLDTDPAARSPQDQQIVLLNCRNIDIGSKGVIE
EHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MDSDSGLRRGVESRLEFIEFRLFWEGHVNRSDLIEVFGVSINQASTDLNRYLGLAEANMV
CCCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHE
YDKSARTYVRSSTFTPVFHQPDASQYLSQLRSLSDGIIAADDSWIGGLPSFACVPTPARG
ECCCHHHHHHCCCCCCEEECCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCC
VSSKILRAIVTAIKRHEAIEVFYQSMSSPEPAWRWIEPHALVFDGFRWHARAHCPRSSAF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEECCEEEEHHCCCCCHHHH
KDFVLSRITDTRSSKPAEARPSGDREWEEHVELQIAPHPALSAGQRKAIELDYGMERGVT
HHHHHHHHHHCCCCCCCCCCCCCCCCHHHCEEEEECCCCCCCCCCCEEEEECCCCCCCCE
TIPVRRALLYYALKRLGLDTDPAARSPQDQQIVLLNCRNIDIGSKGVIE
EHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA