| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200174
Identifier: 87200174
GI number: 87200174
Start: 2296431
End: 2297189
Strand: Direct
Name: 87200174
Synonym: Saro_2158
Alternate gene names: NA
Gene position: 2296431-2297189 (Clockwise)
Preceding gene: 87200173
Following gene: 87200175
Centisome position: 64.48
GC content: 64.03
Gene sequence:
>759_bases ATGGCTTACCGATCGGCGGCCCACGCACGGGTCCTACTTCTGAGCGCGGCGGCGCTGCTCGCCGTAGCAGCTGAGGCTGC CCATGCGGCCGACCAGTTCAAACAGGCCGCCGATGGCGCCGGAATCGAGTGCATCGTTTCAGCGCGAGAGCTGACCCGCT TCGCATTGGTCGACGACCAGTTCGCCAGCGTCTCGAAGATCTCGACCGGGACGCCCTACAACGACTTTGCAGTGACCAAC GAGCCTGTGCGCGGCGACATCTATGTGTCGGTGCCGGAAACTTACGCGGCACGGTCGATCAGCTTCTTCACCACCACGAA AAAGGGCTTCGTCTACAAGGTCGCGTGCCGGGTTGAGCAAATTCCGGCGACCCAGGTCTTCATCACCAACCCCGCCATCG CGAAGAACCGGGCGGCGGATTGGGAAAGCCAGACCCCGATCGAGACCAGCGCCGTCAGGCTCATCCAGGCGATGGCCAAT GACCGGACGGTCGACGGTTTCGAGGTCCGCCAATCGACTGCCATACCCGCACGGGTCGGCGATCTCGAAGTCCAGCTCAT CGCTGATTATCGCGGCGCCAGCCTCACTGGGAAGGTCGTCCGCATCCACAATCGCGGAGCGAAAAGCGTGACGCTCGCCG AACGCGATCTCGCACCGCGCGACACGCTCGCCGTCTCGATCGCCGAGCCAAAGCTCGAACCCGGGGCCAGCACCACGGCC TTTGTTGTCGGCGCAAGCGGGGAGACCGGCAATGACTGA
Upstream 100 bases:
>100_bases AACGCCGCTTCCGCTTCAGCTGGACTTACCGCGGCCTGCGCCTCGCGCTCTCCGGGTTTGTGCAGCTCCCCCCACAGGAA AAATCCAAGGAGGCCCAGTG
Downstream 100 bases:
>100_bases TGCAACCCATACGCCAGGCACTGCCCCTTTGCAGGCCGAGAGCGCAGCATCGTCCGAACTTTCCGGGCTCAACGCCCGCA CCGCGCGCCGTCAGAAGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MAYRSAAHARVLLLSAAALLAVAAEAAHAADQFKQAADGAGIECIVSARELTRFALVDDQFASVSKISTGTPYNDFAVTN EPVRGDIYVSVPETYAARSISFFTTTKKGFVYKVACRVEQIPATQVFITNPAIAKNRAADWESQTPIETSAVRLIQAMAN DRTVDGFEVRQSTAIPARVGDLEVQLIADYRGASLTGKVVRIHNRGAKSVTLAERDLAPRDTLAVSIAEPKLEPGASTTA FVVGASGETGND
Sequences:
>Translated_252_residues MAYRSAAHARVLLLSAAALLAVAAEAAHAADQFKQAADGAGIECIVSARELTRFALVDDQFASVSKISTGTPYNDFAVTN EPVRGDIYVSVPETYAARSISFFTTTKKGFVYKVACRVEQIPATQVFITNPAIAKNRAADWESQTPIETSAVRLIQAMAN DRTVDGFEVRQSTAIPARVGDLEVQLIADYRGASLTGKVVRIHNRGAKSVTLAERDLAPRDTLAVSIAEPKLEPGASTTA FVVGASGETGND >Mature_251_residues AYRSAAHARVLLLSAAALLAVAAEAAHAADQFKQAADGAGIECIVSARELTRFALVDDQFASVSKISTGTPYNDFAVTNE PVRGDIYVSVPETYAARSISFFTTTKKGFVYKVACRVEQIPATQVFITNPAIAKNRAADWESQTPIETSAVRLIQAMAND RTVDGFEVRQSTAIPARVGDLEVQLIADYRGASLTGKVVRIHNRGAKSVTLAERDLAPRDTLAVSIAEPKLEPGASTTAF VVGASGETGND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26775; Mature: 26644
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYRSAAHARVLLLSAAALLAVAAEAAHAADQFKQAADGAGIECIVSARELTRFALVDDQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHEEEEECCH FASVSKISTGTPYNDFAVTNEPVRGDIYVSVPETYAARSISFFTTTKKGFVYKVACRVEQ HHHHHHCCCCCCCCCCEECCCCCCCEEEEECCCHHHHCEEEEEEECCCCEEEEEEEEHCC IPATQVFITNPAIAKNRAADWESQTPIETSAVRLIQAMANDRTVDGFEVRQSTAIPARVG CCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCEEEC DLEVQLIADYRGASLTGKVVRIHNRGAKSVTLAERDLAPRDTLAVSIAEPKLEPGASTTA CEEEEEEECCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCEE FVVGASGETGND EEEECCCCCCCC >Mature Secondary Structure AYRSAAHARVLLLSAAALLAVAAEAAHAADQFKQAADGAGIECIVSARELTRFALVDDQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHEEEEECCH FASVSKISTGTPYNDFAVTNEPVRGDIYVSVPETYAARSISFFTTTKKGFVYKVACRVEQ HHHHHHCCCCCCCCCCEECCCCCCCEEEEECCCHHHHCEEEEEEECCCCEEEEEEEEHCC IPATQVFITNPAIAKNRAADWESQTPIETSAVRLIQAMANDRTVDGFEVRQSTAIPARVG CCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCEEEC DLEVQLIADYRGASLTGKVVRIHNRGAKSVTLAERDLAPRDTLAVSIAEPKLEPGASTTA CEEEEEEECCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCEE FVVGASGETGND EEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA