Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is 87200174

Identifier: 87200174

GI number: 87200174

Start: 2296431

End: 2297189

Strand: Direct

Name: 87200174

Synonym: Saro_2158

Alternate gene names: NA

Gene position: 2296431-2297189 (Clockwise)

Preceding gene: 87200173

Following gene: 87200175

Centisome position: 64.48

GC content: 64.03

Gene sequence:

>759_bases
ATGGCTTACCGATCGGCGGCCCACGCACGGGTCCTACTTCTGAGCGCGGCGGCGCTGCTCGCCGTAGCAGCTGAGGCTGC
CCATGCGGCCGACCAGTTCAAACAGGCCGCCGATGGCGCCGGAATCGAGTGCATCGTTTCAGCGCGAGAGCTGACCCGCT
TCGCATTGGTCGACGACCAGTTCGCCAGCGTCTCGAAGATCTCGACCGGGACGCCCTACAACGACTTTGCAGTGACCAAC
GAGCCTGTGCGCGGCGACATCTATGTGTCGGTGCCGGAAACTTACGCGGCACGGTCGATCAGCTTCTTCACCACCACGAA
AAAGGGCTTCGTCTACAAGGTCGCGTGCCGGGTTGAGCAAATTCCGGCGACCCAGGTCTTCATCACCAACCCCGCCATCG
CGAAGAACCGGGCGGCGGATTGGGAAAGCCAGACCCCGATCGAGACCAGCGCCGTCAGGCTCATCCAGGCGATGGCCAAT
GACCGGACGGTCGACGGTTTCGAGGTCCGCCAATCGACTGCCATACCCGCACGGGTCGGCGATCTCGAAGTCCAGCTCAT
CGCTGATTATCGCGGCGCCAGCCTCACTGGGAAGGTCGTCCGCATCCACAATCGCGGAGCGAAAAGCGTGACGCTCGCCG
AACGCGATCTCGCACCGCGCGACACGCTCGCCGTCTCGATCGCCGAGCCAAAGCTCGAACCCGGGGCCAGCACCACGGCC
TTTGTTGTCGGCGCAAGCGGGGAGACCGGCAATGACTGA

Upstream 100 bases:

>100_bases
AACGCCGCTTCCGCTTCAGCTGGACTTACCGCGGCCTGCGCCTCGCGCTCTCCGGGTTTGTGCAGCTCCCCCCACAGGAA
AAATCCAAGGAGGCCCAGTG

Downstream 100 bases:

>100_bases
TGCAACCCATACGCCAGGCACTGCCCCTTTGCAGGCCGAGAGCGCAGCATCGTCCGAACTTTCCGGGCTCAACGCCCGCA
CCGCGCGCCGTCAGAAGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MAYRSAAHARVLLLSAAALLAVAAEAAHAADQFKQAADGAGIECIVSARELTRFALVDDQFASVSKISTGTPYNDFAVTN
EPVRGDIYVSVPETYAARSISFFTTTKKGFVYKVACRVEQIPATQVFITNPAIAKNRAADWESQTPIETSAVRLIQAMAN
DRTVDGFEVRQSTAIPARVGDLEVQLIADYRGASLTGKVVRIHNRGAKSVTLAERDLAPRDTLAVSIAEPKLEPGASTTA
FVVGASGETGND

Sequences:

>Translated_252_residues
MAYRSAAHARVLLLSAAALLAVAAEAAHAADQFKQAADGAGIECIVSARELTRFALVDDQFASVSKISTGTPYNDFAVTN
EPVRGDIYVSVPETYAARSISFFTTTKKGFVYKVACRVEQIPATQVFITNPAIAKNRAADWESQTPIETSAVRLIQAMAN
DRTVDGFEVRQSTAIPARVGDLEVQLIADYRGASLTGKVVRIHNRGAKSVTLAERDLAPRDTLAVSIAEPKLEPGASTTA
FVVGASGETGND
>Mature_251_residues
AYRSAAHARVLLLSAAALLAVAAEAAHAADQFKQAADGAGIECIVSARELTRFALVDDQFASVSKISTGTPYNDFAVTNE
PVRGDIYVSVPETYAARSISFFTTTKKGFVYKVACRVEQIPATQVFITNPAIAKNRAADWESQTPIETSAVRLIQAMAND
RTVDGFEVRQSTAIPARVGDLEVQLIADYRGASLTGKVVRIHNRGAKSVTLAERDLAPRDTLAVSIAEPKLEPGASTTAF
VVGASGETGND

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26775; Mature: 26644

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYRSAAHARVLLLSAAALLAVAAEAAHAADQFKQAADGAGIECIVSARELTRFALVDDQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHEEEEECCH
FASVSKISTGTPYNDFAVTNEPVRGDIYVSVPETYAARSISFFTTTKKGFVYKVACRVEQ
HHHHHHCCCCCCCCCCEECCCCCCCEEEEECCCHHHHCEEEEEEECCCCEEEEEEEEHCC
IPATQVFITNPAIAKNRAADWESQTPIETSAVRLIQAMANDRTVDGFEVRQSTAIPARVG
CCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCEEEC
DLEVQLIADYRGASLTGKVVRIHNRGAKSVTLAERDLAPRDTLAVSIAEPKLEPGASTTA
CEEEEEEECCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCEE
FVVGASGETGND
EEEECCCCCCCC
>Mature Secondary Structure 
AYRSAAHARVLLLSAAALLAVAAEAAHAADQFKQAADGAGIECIVSARELTRFALVDDQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHEEEEECCH
FASVSKISTGTPYNDFAVTNEPVRGDIYVSVPETYAARSISFFTTTKKGFVYKVACRVEQ
HHHHHHCCCCCCCCCCEECCCCCCCEEEEECCCHHHHCEEEEEEECCCCEEEEEEEEHCC
IPATQVFITNPAIAKNRAADWESQTPIETSAVRLIQAMANDRTVDGFEVRQSTAIPARVG
CCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCEEEC
DLEVQLIADYRGASLTGKVVRIHNRGAKSVTLAERDLAPRDTLAVSIAEPKLEPGASTTA
CEEEEEEECCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCEE
FVVGASGETGND
EEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA