Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200068

Identifier: 87200068

GI number: 87200068

Start: 2193628

End: 2194191

Strand: Direct

Name: 87200068

Synonym: Saro_2052

Alternate gene names: NA

Gene position: 2193628-2194191 (Clockwise)

Preceding gene: 87200067

Following gene: 87200071

Centisome position: 61.59

GC content: 66.84

Gene sequence:

>564_bases
ATGAACGGCTTTCGCTTCTATCATCTTCTGTTTGCGGGCGGCGTTGCGCTCGCCTGGCTTACCGCTGAATCGCTGGGGCT
CGTCCACGCATGGACCGGCTATGTCGTTGCTGCGCTGATTGGCCTGCGCCTGATCCTGTCGGCATTGGGCGCTCGCGGCT
TCGACCTTGTGCGTCTCAAGCCAAGGTTCGCCACCGCGCCCCGCGGACAGGGCGGCCTGCGCCATCCCGCAATCGGCAGG
CTGCTGACGCTCGCGCTGCTTGCCGCCGTCGCGACAACCGCCACGACCGGGATCGTCATGGACAAGGGCGGGACGCTGTT
CGGCCAAAGCATCCGCGCGAAGGACGAGGAGCGCCGCGAGGAACGCGAACACGCTTCCGCCCGCCAGGACGACGGCGAAG
AAGAGGGCGAAGGCGAGGACGAAGAGGGCCTGCTCGGCGAAATCCACGAAACGACCGGCAACGCGCTGCTGCCGCTCGTT
TCGCTGCATGCGCTATGGCTGCTGTTCTTCAGGCTGGATCTGGCGCGCTTCGTGCTGTTCCTGCCGCGCCGCCGCCCCGC
ATGA

Upstream 100 bases:

>100_bases
CGCAAGGAAGTTCACGCAAGCTTCGCTTGATGATGCAAGTCAAGGAAATGACCGCACGAATTGCTAGGCCGCTCGGCAGA
GGGGCAAGAAAGGCAACTCG

Downstream 100 bases:

>100_bases
CCGGAGCGGCACGCGCACGCCTTACTCGGTAAGGTCGGTCCAGGCGTCCTTGATCCGTTCGAAGAAGCCCTTCGACTGGG
GGCATTCCTCGCCGGTCTCG

Product: cytochrome B561

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MNGFRFYHLLFAGGVALAWLTAESLGLVHAWTGYVVAALIGLRLILSALGARGFDLVRLKPRFATAPRGQGGLRHPAIGR
LLTLALLAAVATTATTGIVMDKGGTLFGQSIRAKDEERREEREHASARQDDGEEEGEGEDEEGLLGEIHETTGNALLPLV
SLHALWLLFFRLDLARFVLFLPRRRPA

Sequences:

>Translated_187_residues
MNGFRFYHLLFAGGVALAWLTAESLGLVHAWTGYVVAALIGLRLILSALGARGFDLVRLKPRFATAPRGQGGLRHPAIGR
LLTLALLAAVATTATTGIVMDKGGTLFGQSIRAKDEERREEREHASARQDDGEEEGEGEDEEGLLGEIHETTGNALLPLV
SLHALWLLFFRLDLARFVLFLPRRRPA
>Mature_187_residues
MNGFRFYHLLFAGGVALAWLTAESLGLVHAWTGYVVAALIGLRLILSALGARGFDLVRLKPRFATAPRGQGGLRHPAIGR
LLTLALLAAVATTATTGIVMDKGGTLFGQSIRAKDEERREEREHASARQDDGEEEGEGEDEEGLLGEIHETTGNALLPLV
SLHALWLLFFRLDLARFVLFLPRRRPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20408; Mature: 20408

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGFRFYHLLFAGGVALAWLTAESLGLVHAWTGYVVAALIGLRLILSALGARGFDLVRLK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
PRFATAPRGQGGLRHPAIGRLLTLALLAAVATTATTGIVMDKGGTLFGQSIRAKDEERRE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCHHHHCCHHHHHH
EREHASARQDDGEEEGEGEDEEGLLGEIHETTGNALLPLVSLHALWLLFFRLDLARFVLF
HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LPRRRPA
HCCCCCC
>Mature Secondary Structure
MNGFRFYHLLFAGGVALAWLTAESLGLVHAWTGYVVAALIGLRLILSALGARGFDLVRLK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
PRFATAPRGQGGLRHPAIGRLLTLALLAAVATTATTGIVMDKGGTLFGQSIRAKDEERRE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCHHHHCCHHHHHH
EREHASARQDDGEEEGEGEDEEGLLGEIHETTGNALLPLVSLHALWLLFFRLDLARFVLF
HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LPRRRPA
HCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA