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The map label for this gene is 87200056

Identifier: 87200056

GI number: 87200056

Start: 2177102

End: 2178367

Strand: Reverse

Name: 87200056

Synonym: Saro_2040

Alternate gene names: NA

Gene position: 2178367-2177102 (Counterclockwise)

Preceding gene: 87200058

Following gene: 87200055

Centisome position: 61.16

GC content: 64.53

Gene sequence:

>1266_bases
ATGCCGCAGCCGTCCCTTCCAGCCGGAAAGTCCGTAATCGAGCGTCTCGCGATCCTCGCCGATGCGGCCAAGTACGATGC
TTCGTGCGCCTCGTCGGGCACGACCAAACGCAACAGTAAGGGCGGCAAGGGGATAGGTTCGACCGAGGGCATGGGGATCT
GCCACGCCTACGCGCCCGATGGCCGCTGCATATCCCTGCTCAAGATCCTGCTGACGAACCACTGCGTGTTCGATTGCCAT
TACTGCGTGAACCGCAAGAGTTCGAACACCCCACGCGCGCGCTTTACCCCCCAGGAAGTGGTCGACCTGACGCTATCGTT
CTACCGCCGCAATTACATCGAGGGTCTGTTCCTCTCCTCAGGTATCGTGAAAAGCTCCAGCCATACGATGGAGCAGTTGA
TAGAAGTCGCCCGTATCCTGCGGGAAGAGCACGATTTTCGCGGGTATATCCATCTCAAGACCATCCCTGAGGCCGATCCC
GATCTGGTCGCGCGGGCGGGGCTGTTCGCCGATCGCGTCTCGATCAACGTGGAACTGCCCACCGTGGCGGGCCTCACGCG
CCTTGCGCCCGACAAGTCCGCGCCGCAGATCGAAGGCGCGATGGGATCGCTGAAGCAGGCGATTGCCGAGGCGAAGGACG
CCCGCAAGCGTTTCCGCCATGCGCCGAAGTTTGCGCCCGCGGGCCAGTCCACTCAGATGATCGTCGGCGCTGATGCCGCG
ACCGATGCTGACATCGTCGGCCGCGCGAGCACGCTTTATGATCGATTCCGCCTCCGCCGCGTCTATTATTCAGCATTCAG
CCCCATTCCCGATGCCAGCGCCGTCCTTCCGCTGAAACGCCCACCCTTGATGCGCGAGCATCGCCTCTACCAGTCCGACT
GGCTGATGCGCTTTTATGGCTACGCCCCGCACGAGGTGCAGCAGGCGGCGGGGGACGACGGGATGCTTCCGCTCGACATC
GACCCCAAGCTGTCCTGGGCCTTGCGTTTTCGCGGCGATTTCCCGGTCGACATCAACCGCGCCCCGCGCGAGAGGCTGCT
GCGCGTTCCAGGGCTGGGGGTGAAGGCGGTCAACGCGCTCATCGCCGCGCGCCGTCAGCGCCGCTTGCGCCTGGCGGACA
TCGGCAAGCTCACGGTTTCGCTCGCCAAGGTGCGCCCGTTCATCGTGGCCGAGGACTGGCGCCCGGTCCTGCTCACAGAC
CGGGCCGACCTGCGCAGCCTCGTGGCGCCTGCCGCGCCCGGACAACAGCTTGAACTCTTCGCATGA

Upstream 100 bases:

>100_bases
CAATCTGGTCGTCGGCGAAGGTATTGTGGTCGCGCCGCGATCAAGCCCTGTCCGCAAGTACGGGCTGGCATCTTCCTGAA
ATGGAACATATAAAGAACGA

Downstream 100 bases:

>100_bases
TGCCGGACAGGCGCCGGTTTGAGGCCTTCCGCGTACAATTCGCCGCGTCGGACGATTTCGAAGGCTGGCGTGACGCCGCC
CGCCGCATGATTCGCGCGAA

Product: radical SAM family protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Radical SAM Family Protein; Elongator /MiaB/NifB; Radical Sam Domain Protein; Radical SAM; Radical SAM Superfamily Protein; Biotin Synthase Related Domain-Containing Protein; Biotin Synthase Related Domain Containing Protein; Elongator Protein; Radical SAM Methylase Protein; Helix-Hairpin-Helix Motif; Radical SAM Protein

Number of amino acids: Translated: 421; Mature: 420

Protein sequence:

>421_residues
MPQPSLPAGKSVIERLAILADAAKYDASCASSGTTKRNSKGGKGIGSTEGMGICHAYAPDGRCISLLKILLTNHCVFDCH
YCVNRKSSNTPRARFTPQEVVDLTLSFYRRNYIEGLFLSSGIVKSSSHTMEQLIEVARILREEHDFRGYIHLKTIPEADP
DLVARAGLFADRVSINVELPTVAGLTRLAPDKSAPQIEGAMGSLKQAIAEAKDARKRFRHAPKFAPAGQSTQMIVGADAA
TDADIVGRASTLYDRFRLRRVYYSAFSPIPDASAVLPLKRPPLMREHRLYQSDWLMRFYGYAPHEVQQAAGDDGMLPLDI
DPKLSWALRFRGDFPVDINRAPRERLLRVPGLGVKAVNALIAARRQRRLRLADIGKLTVSLAKVRPFIVAEDWRPVLLTD
RADLRSLVAPAAPGQQLELFA

Sequences:

>Translated_421_residues
MPQPSLPAGKSVIERLAILADAAKYDASCASSGTTKRNSKGGKGIGSTEGMGICHAYAPDGRCISLLKILLTNHCVFDCH
YCVNRKSSNTPRARFTPQEVVDLTLSFYRRNYIEGLFLSSGIVKSSSHTMEQLIEVARILREEHDFRGYIHLKTIPEADP
DLVARAGLFADRVSINVELPTVAGLTRLAPDKSAPQIEGAMGSLKQAIAEAKDARKRFRHAPKFAPAGQSTQMIVGADAA
TDADIVGRASTLYDRFRLRRVYYSAFSPIPDASAVLPLKRPPLMREHRLYQSDWLMRFYGYAPHEVQQAAGDDGMLPLDI
DPKLSWALRFRGDFPVDINRAPRERLLRVPGLGVKAVNALIAARRQRRLRLADIGKLTVSLAKVRPFIVAEDWRPVLLTD
RADLRSLVAPAAPGQQLELFA
>Mature_420_residues
PQPSLPAGKSVIERLAILADAAKYDASCASSGTTKRNSKGGKGIGSTEGMGICHAYAPDGRCISLLKILLTNHCVFDCHY
CVNRKSSNTPRARFTPQEVVDLTLSFYRRNYIEGLFLSSGIVKSSSHTMEQLIEVARILREEHDFRGYIHLKTIPEADPD
LVARAGLFADRVSINVELPTVAGLTRLAPDKSAPQIEGAMGSLKQAIAEAKDARKRFRHAPKFAPAGQSTQMIVGADAAT
DADIVGRASTLYDRFRLRRVYYSAFSPIPDASAVLPLKRPPLMREHRLYQSDWLMRFYGYAPHEVQQAAGDDGMLPLDID
PKLSWALRFRGDFPVDINRAPRERLLRVPGLGVKAVNALIAARRQRRLRLADIGKLTVSLAKVRPFIVAEDWRPVLLTDR
ADLRSLVAPAAPGQQLELFA

Specific function: Unknown

COG id: COG4277

COG function: function code R; Predicted DNA-binding protein with the Helix-hairpin-helix motif

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46479; Mature: 46348

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: PS00260 GLUCAGON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQPSLPAGKSVIERLAILADAAKYDASCASSGTTKRNSKGGKGIGSTEGMGICHAYAPD
CCCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
GRCISLLKILLTNHCVFDCHYCVNRKSSNTPRARFTPQEVVDLTLSFYRRNYIEGLFLSS
CHHHHHHHHHHHCCCEEEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
GIVKSSSHTMEQLIEVARILREEHDFRGYIHLKTIPEADPDLVARAGLFADRVSINVELP
CCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHCHHEEEEEEEEECC
TVAGLTRLAPDKSAPQIEGAMGSLKQAIAEAKDARKRFRHAPKFAPAGQSTQMIVGADAA
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCC
TDADIVGRASTLYDRFRLRRVYYSAFSPIPDASAVLPLKRPPLMREHRLYQSDWLMRFYG
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
YAPHEVQQAAGDDGMLPLDIDPKLSWALRFRGDFPVDINRAPRERLLRVPGLGVKAVNAL
CCHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCHHHHHHH
IAARRQRRLRLADIGKLTVSLAKVRPFIVAEDWRPVLLTDRADLRSLVAPAAPGQQLELF
HHHHHHHCCHHHHHHHHHHHHHHHCCEEEECCCCCEEEECHHHHHHHHCCCCCCCCEEEC
A
C
>Mature Secondary Structure 
PQPSLPAGKSVIERLAILADAAKYDASCASSGTTKRNSKGGKGIGSTEGMGICHAYAPD
CCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
GRCISLLKILLTNHCVFDCHYCVNRKSSNTPRARFTPQEVVDLTLSFYRRNYIEGLFLSS
CHHHHHHHHHHHCCCEEEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
GIVKSSSHTMEQLIEVARILREEHDFRGYIHLKTIPEADPDLVARAGLFADRVSINVELP
CCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHCHHEEEEEEEEECC
TVAGLTRLAPDKSAPQIEGAMGSLKQAIAEAKDARKRFRHAPKFAPAGQSTQMIVGADAA
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCC
TDADIVGRASTLYDRFRLRRVYYSAFSPIPDASAVLPLKRPPLMREHRLYQSDWLMRFYG
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
YAPHEVQQAAGDDGMLPLDIDPKLSWALRFRGDFPVDINRAPRERLLRVPGLGVKAVNAL
CCHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCHHHHHHH
IAARRQRRLRLADIGKLTVSLAKVRPFIVAEDWRPVLLTDRADLRSLVAPAAPGQQLELF
HHHHHHHCCHHHHHHHHHHHHHHHCCEEEECCCCCEEEECHHHHHHHHCCCCCCCCEEEC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA