| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is ppnK
Identifier: 87200001
GI number: 87200001
Start: 2104598
End: 2105383
Strand: Direct
Name: ppnK
Synonym: Saro_1984
Alternate gene names: 87200001
Gene position: 2104598-2105383 (Clockwise)
Preceding gene: 87199999
Following gene: 87200002
Centisome position: 59.09
GC content: 63.61
Gene sequence:
>786_bases ATGACAATGCCGGAATTTGCGCGCCTTGCCCTTCTGGCATCGCCTACGGATCGGGCGCAGGATGCCTGCGAGGCCCTGCG CAAGGGCCGCGACTGGGTCCCGCTGGAGGAAGCCGATGCCGCCGTGGTGATCGGTGGCGACGGGTTCATGCTCCAGACCT TGCACACCATGATCGACATCGATCACATCGTGCCGGCCTTCGGCCTGAACCTCGGCACCGTCGGCTTCCTGATGAACAAG TACCGGTCGGCCAGGTCGATCGAGGAACGGCTCGCCAAGGCGACGAGGATTGCCGTTTCGCCACTGCGCATGACGGCGAC GACCAACACCGGCGAAATCCAGTCGTTTTGCGCAATCAACGAAGTCTCGATCCTTCGCGAAACGCGCCAGACCGCGAAAC TGGAAGTCAGCGTGAACGGCAAGGTGCGGATGCCGGAACTCGCCTGCGACGGCGTGCTTGTCGCGACCCCGGCAGGCTCC ACAGCCTACAACCTGTCGGCGAACGGCCCTATCCTGCCGCTCTCGTCCAACATGCTGGCACTGACCCCGATCAGCCCCTT CCGACCGCGCCGCTGGCGCGGCGCAATCCTTCCCGAGACGTACGAGATCGTGTTCAAGGCACTCGAATCGGTCAAGCGGC CGGTCCTCGTGGTGGCCGACCAGAAGGAAGTCCGCGACGTAAGCGAAGTGCGCGTGAAGGCTTGGCCGGAGCATCGCCTG ACCCTGATGTTCGACCGTGGGCAGAGTCTGGAGGACCGCATCTTCGCCGAACAGTTCATGGTTTGA
Upstream 100 bases:
>100_bases CGTTCCGCTAATGCGTCCGGCTCTCGCCAGTTGTGCTTTTGTGCATTGCGTCATGGCGTGGCGCTCCATATCTGCCTCTG TAGGAATTTACCGGGGGCCG
Downstream 100 bases:
>100_bases AAATTTTTGAAAGCAGGTGCTTGCCAAACCGGAAACGCCTGTTATTAGCGCGCTCCTGCCCCGGGCAACCGGGGCTGCTC CCTGATAGCTCAGCGGTAGA
Product: inorganic polyphosphate/ATP-NAD kinase
Products: NA
Alternate protein names: Poly(P)/ATP NAD kinase [H]
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MTMPEFARLALLASPTDRAQDACEALRKGRDWVPLEEADAAVVIGGDGFMLQTLHTMIDIDHIVPAFGLNLGTVGFLMNK YRSARSIEERLAKATRIAVSPLRMTATTNTGEIQSFCAINEVSILRETRQTAKLEVSVNGKVRMPELACDGVLVATPAGS TAYNLSANGPILPLSSNMLALTPISPFRPRRWRGAILPETYEIVFKALESVKRPVLVVADQKEVRDVSEVRVKAWPEHRL TLMFDRGQSLEDRIFAEQFMV
Sequences:
>Translated_261_residues MTMPEFARLALLASPTDRAQDACEALRKGRDWVPLEEADAAVVIGGDGFMLQTLHTMIDIDHIVPAFGLNLGTVGFLMNK YRSARSIEERLAKATRIAVSPLRMTATTNTGEIQSFCAINEVSILRETRQTAKLEVSVNGKVRMPELACDGVLVATPAGS TAYNLSANGPILPLSSNMLALTPISPFRPRRWRGAILPETYEIVFKALESVKRPVLVVADQKEVRDVSEVRVKAWPEHRL TLMFDRGQSLEDRIFAEQFMV >Mature_260_residues TMPEFARLALLASPTDRAQDACEALRKGRDWVPLEEADAAVVIGGDGFMLQTLHTMIDIDHIVPAFGLNLGTVGFLMNKY RSARSIEERLAKATRIAVSPLRMTATTNTGEIQSFCAINEVSILRETRQTAKLEVSVNGKVRMPELACDGVLVATPAGST AYNLSANGPILPLSSNMLALTPISPFRPRRWRGAILPETYEIVFKALESVKRPVLVVADQKEVRDVSEVRVKAWPEHRLT LMFDRGQSLEDRIFAEQFMV
Specific function: Catalyzes the phosphorylation of NAD to NADP. Utilizes ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus [H]
COG id: COG0061
COG function: function code G; Predicted sugar kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAD kinase family [H]
Homologues:
Organism=Escherichia coli, GI1788968, Length=155, Percent_Identity=32.9032258064516, Blast_Score=65, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6322509, Length=208, Percent_Identity=31.7307692307692, Blast_Score=71, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6325068, Length=235, Percent_Identity=26.8085106382979, Blast_Score=67, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016064 - InterPro: IPR017438 - InterPro: IPR017437 - InterPro: IPR002504 [H]
Pfam domain/function: PF01513 NAD_kinase [H]
EC number: =2.7.1.23 [H]
Molecular weight: Translated: 28896; Mature: 28765
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMPEFARLALLASPTDRAQDACEALRKGRDWVPLEEADAAVVIGGDGFMLQTLHTMIDI CCCCHHHHHHEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHH DHIVPAFGLNLGTVGFLMNKYRSARSIEERLAKATRIAVSPLRMTATTNTGEIQSFCAIN HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHH EVSILRETRQTAKLEVSVNGKVRMPELACDGVLVATPAGSTAYNLSANGPILPLSSNMLA HHHHHHHHHHHEEEEEEECCEEECCCCCCCCEEEECCCCCCEEEECCCCCEEEECCCEEE LTPISPFRPRRWRGAILPETYEIVFKALESVKRPVLVVADQKEVRDVSEVRVKAWPEHRL EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCE TLMFDRGQSLEDRIFAEQFMV EEEEECCCCHHHHHHHHHHCC >Mature Secondary Structure TMPEFARLALLASPTDRAQDACEALRKGRDWVPLEEADAAVVIGGDGFMLQTLHTMIDI CCCHHHHHHEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHH DHIVPAFGLNLGTVGFLMNKYRSARSIEERLAKATRIAVSPLRMTATTNTGEIQSFCAIN HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHH EVSILRETRQTAKLEVSVNGKVRMPELACDGVLVATPAGSTAYNLSANGPILPLSSNMLA HHHHHHHHHHHEEEEEEECCEEECCCCCCCCEEEECCCCCCEEEECCCCCEEEECCCEEE LTPISPFRPRRWRGAILPETYEIVFKALESVKRPVLVVADQKEVRDVSEVRVKAWPEHRL EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCE TLMFDRGQSLEDRIFAEQFMV EEEEECCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA