Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87199964

Identifier: 87199964

GI number: 87199964

Start: 2063832

End: 2064290

Strand: Direct

Name: 87199964

Synonym: Saro_1947

Alternate gene names: NA

Gene position: 2063832-2064290 (Clockwise)

Preceding gene: 87199953

Following gene: 87199976

Centisome position: 57.95

GC content: 65.58

Gene sequence:

>459_bases
ATGTCGCAGCGCATCTACCTGGTCATCATGGACGAGACCGACGAGGCCAAGGCAGCCCTGCGCTTTGCCGCGCGCCGTGC
AGTGCGCACGACGGGAGCAGTCCACATCCTGGCCTTGGTCCCCCAGCAGGAGTTCGTTGCCTTTGGCGGCGTGCAGGCTA
CGATTGAGGAGGAAGCGCGCGACCGGGCCGAAGTGCTGGCGATGACAGCCGCCGGCAGCCTTGCCAGCGAATCCGGTCTG
ACGCCCGTCATCGCAGTCCGCCAGGGCGATGGACCAAAGGTAGTGCGAGAATACCTCGGCGAGCATCCTGAAGTGTCGGC
ACTCGTCCTCGGCGCGGCGGGCGGCAGCAACCCCGGACCGCTTGTTTCGCACTTCGCCGGGATCGCGGGACAGCTTCCCT
GCCCTCTGATGATCGTCCCCGGTGCGATTTCCGATCAGGAAATCGACCGGTTCAGCTGA

Upstream 100 bases:

>100_bases
CGGCGCCATTTCACCAGCATGGCGTGTCGGGTCAAGTGGGTTGCCGCTTGCGCCGCATACGAATTTGCCGATACCTGTGC
TTCGGGAAGGACAAATCGCC

Downstream 100 bases:

>100_bases
CGGAACTGCTCGCTACTTCTTGCGACCCTGATGGCGGATGTTGGACGGTCGTCCGCGCTTTCCCGCCATGTAGTTGCCTT
GCCTGCGCGGTTTCTGCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: UspA Domain-Containing Protein; UspA Domain Protein; Universal Stress Protein UspA; Uspa Domain-Containing Protein; Universal Stress Protein

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MSQRIYLVIMDETDEAKAALRFAARRAVRTTGAVHILALVPQQEFVAFGGVQATIEEEARDRAEVLAMTAAGSLASESGL
TPVIAVRQGDGPKVVREYLGEHPEVSALVLGAAGGSNPGPLVSHFAGIAGQLPCPLMIVPGAISDQEIDRFS

Sequences:

>Translated_152_residues
MSQRIYLVIMDETDEAKAALRFAARRAVRTTGAVHILALVPQQEFVAFGGVQATIEEEARDRAEVLAMTAAGSLASESGL
TPVIAVRQGDGPKVVREYLGEHPEVSALVLGAAGGSNPGPLVSHFAGIAGQLPCPLMIVPGAISDQEIDRFS
>Mature_151_residues
SQRIYLVIMDETDEAKAALRFAARRAVRTTGAVHILALVPQQEFVAFGGVQATIEEEARDRAEVLAMTAAGSLASESGLT
PVIAVRQGDGPKVVREYLGEHPEVSALVLGAAGGSNPGPLVSHFAGIAGQLPCPLMIVPGAISDQEIDRFS

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15920; Mature: 15789

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQRIYLVIMDETDEAKAALRFAARRAVRTTGAVHILALVPQQEFVAFGGVQATIEEEAR
CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHEECCEEEEHHHHHH
DRAEVLAMTAAGSLASESGLTPVIAVRQGDGPKVVREYLGEHPEVSALVLGAAGGSNPGP
HHHHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCEEEEEEECCCCCCCCH
LVSHFAGIAGQLPCPLMIVPGAISDQEIDRFS
HHHHHHHHCCCCCCCEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
SQRIYLVIMDETDEAKAALRFAARRAVRTTGAVHILALVPQQEFVAFGGVQATIEEEAR
CCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHEECCEEEEHHHHHH
DRAEVLAMTAAGSLASESGLTPVIAVRQGDGPKVVREYLGEHPEVSALVLGAAGGSNPGP
HHHHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCEEEEEEECCCCCCCCH
LVSHFAGIAGQLPCPLMIVPGAISDQEIDRFS
HHHHHHHHCCCCCCCEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA