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The map label for this gene is yfgC [C]

Identifier: 87199921

GI number: 87199921

Start: 2017265

End: 2018746

Strand: Direct

Name: yfgC [C]

Synonym: Saro_1904

Alternate gene names: 87199921

Gene position: 2017265-2018746 (Clockwise)

Preceding gene: 87199920

Following gene: 87199924

Centisome position: 56.64

GC content: 64.3

Gene sequence:

>1482_bases
ATGCCATTTGCCCGCCGTTCGCGCGCCGCTTTCCTGACCGTCACCGCAATCGTCGTCGCCGCATTGCCGGCGTGTGCCAG
CCAGACCGGCAGTCCCGCAACCGCGCAGGGCACGGCCCAGGCGATCAGTGCGGCTGACAGAAAGCAGGGGGCAGAAGCCC
ATCCGCAGCTTCTTCAGGAATTCGGCGGAGCGATGACCGGGCCGCAGGCTGCCTACGTCGAAACCGTGGGCAAGAACATC
GCTGTCCAGTCCGGCCTCAGCAACGCGCGAGGCGATTTCACGGTCACCCTGCTCAATTCGCCGGTCAACAACGCCTTCGC
GATTCCCGGCGGCTACGTTTACGTCACACGCCAGCTCGCAGCGTTGATGAACAACGAGGCAGAGCTTGCCGGCGTGCTCG
GACACGAGGTTGGTCACGTTGCCGCAAGGCACGCAGCCAAGCGGCAAAGCACCGCAACGCGCAATTCCCTTCTCGGTGCG
CTCGGCACGATCCTTTCCGGGGCGATTCTCGGGAACAGTGCGCTGGGCCAGCTCGGCCAGCAGATTTTCTCGACCGGCAG
CCAGCTACTGACGCTGAAGTATTCGCGCGGGCAGGAGACCGAGGCGGACAATCTCGGCATCACCTATCTCCAGCGTGCCG
GATACGATCCGCGCGCGATGTCTACCGTTCTGCAGAGCCTGGCCAACCAGAATGCACTCGACGCCAGCCTCAAGGGCACG
TCGAACCAGGTTCCGGAGTGGGCCAGTACCCACCCGGATCCGGCCTCGCGCGTGCGCGCCGCGCTGACCCGGGCCGGTTC
GACGCCGGGCCGCACGAATCGGGACGCCTTTCTCGCGGGGATCAACGGCGTGACCTATGGCGATGACCCTGCGCAGGGCA
TCGTCGATGGATCGCGCTTCACCCATCCGGGCTTCCGCATGGCATTCCAGGCGCCAAACGGGTTCTATCTGGTAAACGGC
ACCCGCGCTGTCTCGATCGCGGGGCAGAGCGGCAAGGGCGAACTGGCGACCGCTACCTACAGCGGCAATCTGTCGACCTA
CGTAAAGACGGTGTTCGCCGGCCTTTCCAGCCAGCAGCAGCTTCAGCCGGATTCGATTCAGACGACGACGGTGAATGGCA
TCCCGGCAGCCTTTGGCACCGCCCGCGTCAACAGCGGCAATGGTCAGGTCGACGTTGTCGTCTTCGCCTATGAATGGGGG
CCGCAGCAGGCGTTCCATTTCTCAACGATCAGCCAGGCCGGGCAGTCGGGGCAGTTCGATTCGATGTTCCGTTCGATGCG
GCGGATCAGCGCCAGCGAAGCGACTGCGGTCAAGCCGCGCAAGCTTTCGGTCGTGACTGTAAGGTCGGGCGACACCCTGC
AGAGCCTGGCGAGCAGGATGGCCTATACCGACAAGCCGATGGAACGTTTCCTCGTGCTCAACGGGCTCACCTCGTCGAGC
AGGCTGACGGCGGGGCAGAAGGTCAAGCTAGTGGTCTATTGA

Upstream 100 bases:

>100_bases
GCGCGGGAACCGGATTTGCGACAAACGGATTGATGCACCGTAACCCGATTGGGTGCGGGCTCGTAACTCGCGTCCGCATA
CCGAAAGCCGGAGAGACCAG

Downstream 100 bases:

>100_bases
ACTCGCGTTGGCGCGAGCTGATCCAAACCCAGTTGGTAGCAGACAAATGAAAGAGGCGGCCGCTTTGCGACCGCCTCTTG
CTTGATCGACTGGATTGCCG

Product: peptidase M48, Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 493; Mature: 492

Protein sequence:

>493_residues
MPFARRSRAAFLTVTAIVVAALPACASQTGSPATAQGTAQAISAADRKQGAEAHPQLLQEFGGAMTGPQAAYVETVGKNI
AVQSGLSNARGDFTVTLLNSPVNNAFAIPGGYVYVTRQLAALMNNEAELAGVLGHEVGHVAARHAAKRQSTATRNSLLGA
LGTILSGAILGNSALGQLGQQIFSTGSQLLTLKYSRGQETEADNLGITYLQRAGYDPRAMSTVLQSLANQNALDASLKGT
SNQVPEWASTHPDPASRVRAALTRAGSTPGRTNRDAFLAGINGVTYGDDPAQGIVDGSRFTHPGFRMAFQAPNGFYLVNG
TRAVSIAGQSGKGELATATYSGNLSTYVKTVFAGLSSQQQLQPDSIQTTTVNGIPAAFGTARVNSGNGQVDVVVFAYEWG
PQQAFHFSTISQAGQSGQFDSMFRSMRRISASEATAVKPRKLSVVTVRSGDTLQSLASRMAYTDKPMERFLVLNGLTSSS
RLTAGQKVKLVVY

Sequences:

>Translated_493_residues
MPFARRSRAAFLTVTAIVVAALPACASQTGSPATAQGTAQAISAADRKQGAEAHPQLLQEFGGAMTGPQAAYVETVGKNI
AVQSGLSNARGDFTVTLLNSPVNNAFAIPGGYVYVTRQLAALMNNEAELAGVLGHEVGHVAARHAAKRQSTATRNSLLGA
LGTILSGAILGNSALGQLGQQIFSTGSQLLTLKYSRGQETEADNLGITYLQRAGYDPRAMSTVLQSLANQNALDASLKGT
SNQVPEWASTHPDPASRVRAALTRAGSTPGRTNRDAFLAGINGVTYGDDPAQGIVDGSRFTHPGFRMAFQAPNGFYLVNG
TRAVSIAGQSGKGELATATYSGNLSTYVKTVFAGLSSQQQLQPDSIQTTTVNGIPAAFGTARVNSGNGQVDVVVFAYEWG
PQQAFHFSTISQAGQSGQFDSMFRSMRRISASEATAVKPRKLSVVTVRSGDTLQSLASRMAYTDKPMERFLVLNGLTSSS
RLTAGQKVKLVVY
>Mature_492_residues
PFARRSRAAFLTVTAIVVAALPACASQTGSPATAQGTAQAISAADRKQGAEAHPQLLQEFGGAMTGPQAAYVETVGKNIA
VQSGLSNARGDFTVTLLNSPVNNAFAIPGGYVYVTRQLAALMNNEAELAGVLGHEVGHVAARHAAKRQSTATRNSLLGAL
GTILSGAILGNSALGQLGQQIFSTGSQLLTLKYSRGQETEADNLGITYLQRAGYDPRAMSTVLQSLANQNALDASLKGTS
NQVPEWASTHPDPASRVRAALTRAGSTPGRTNRDAFLAGINGVTYGDDPAQGIVDGSRFTHPGFRMAFQAPNGFYLVNGT
RAVSIAGQSGKGELATATYSGNLSTYVKTVFAGLSSQQQLQPDSIQTTTVNGIPAAFGTARVNSGNGQVDVVVFAYEWGP
QQAFHFSTISQAGQSGQFDSMFRSMRRISASEATAVKPRKLSVVTVRSGDTLQSLASRMAYTDKPMERFLVLNGLTSSSR
LTAGQKVKLVVY

Specific function: Unknown

COG id: COG4784

COG function: function code R; Putative Zn-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TPR repeat [H]

Homologues:

Organism=Homo sapiens, GI21686999, Length=207, Percent_Identity=28.5024154589372, Blast_Score=85, Evalue=1e-16,
Organism=Escherichia coli, GI1788840, Length=198, Percent_Identity=33.3333333333333, Blast_Score=96, Evalue=7e-21,
Organism=Saccharomyces cerevisiae, GI6322940, Length=189, Percent_Identity=30.6878306878307, Blast_Score=75, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011716
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48; PF07720 TPR_3 [H]

EC number: NA

Molecular weight: Translated: 51644; Mature: 51512

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFARRSRAAFLTVTAIVVAALPACASQTGSPATAQGTAQAISAADRKQGAEAHPQLLQE
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH
FGGAMTGPQAAYVETVGKNIAVQSGLSNARGDFTVTLLNSPVNNAFAIPGGYVYVTRQLA
HCCCCCCCCHHHHHHHCCCCEECCCCCCCCCCEEEEEECCCCCCEEECCCCEEHHHHHHH
ALMNNEAELAGVLGHEVGHVAARHAAKRQSTATRNSLLGALGTILSGAILGNSALGQLGQ
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
QIFSTGSQLLTLKYSRGQETEADNLGITYLQRAGYDPRAMSTVLQSLANQNALDASLKGT
HHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCC
SNQVPEWASTHPDPASRVRAALTRAGSTPGRTNRDAFLAGINGVTYGDDPAQGIVDGSRF
CCCCCCHHCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
THPGFRMAFQAPNGFYLVNGTRAVSIAGQSGKGELATATYSGNLSTYVKTVFAGLSSQQQ
CCCCCEEEEECCCCEEEEECCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCC
LQPDSIQTTTVNGIPAAFGTARVNSGNGQVDVVVFAYEWGPQQAFHFSTISQAGQSGQFD
CCCCCCEEEEECCCCCCCCCEEEECCCCEEEEEEEEEECCCCCCEEHHHHHHCCCCCCHH
SMFRSMRRISASEATAVKPRKLSVVTVRSGDTLQSLASRMAYTDKPMERFLVLNGLTSSS
HHHHHHHHHCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCHHHHHEEEECCCCCC
RLTAGQKVKLVVY
CCCCCCEEEEEEC
>Mature Secondary Structure 
PFARRSRAAFLTVTAIVVAALPACASQTGSPATAQGTAQAISAADRKQGAEAHPQLLQE
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH
FGGAMTGPQAAYVETVGKNIAVQSGLSNARGDFTVTLLNSPVNNAFAIPGGYVYVTRQLA
HCCCCCCCCHHHHHHHCCCCEECCCCCCCCCCEEEEEECCCCCCEEECCCCEEHHHHHHH
ALMNNEAELAGVLGHEVGHVAARHAAKRQSTATRNSLLGALGTILSGAILGNSALGQLGQ
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
QIFSTGSQLLTLKYSRGQETEADNLGITYLQRAGYDPRAMSTVLQSLANQNALDASLKGT
HHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCC
SNQVPEWASTHPDPASRVRAALTRAGSTPGRTNRDAFLAGINGVTYGDDPAQGIVDGSRF
CCCCCCHHCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
THPGFRMAFQAPNGFYLVNGTRAVSIAGQSGKGELATATYSGNLSTYVKTVFAGLSSQQQ
CCCCCEEEEECCCCEEEEECCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCC
LQPDSIQTTTVNGIPAAFGTARVNSGNGQVDVVVFAYEWGPQQAFHFSTISQAGQSGQFD
CCCCCCEEEEECCCCCCCCCEEEECCCCEEEEEEEEEECCCCCCEEHHHHHHCCCCCCHH
SMFRSMRRISASEATAVKPRKLSVVTVRSGDTLQSLASRMAYTDKPMERFLVLNGLTSSS
HHHHHHHHHCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCHHHHHEEEECCCCCC
RLTAGQKVKLVVY
CCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]