| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is pntAB [H]
Identifier: 87199861
GI number: 87199861
Start: 1944711
End: 1944995
Strand: Direct
Name: pntAB [H]
Synonym: Saro_1844
Alternate gene names: 87199861
Gene position: 1944711-1944995 (Clockwise)
Preceding gene: 87199860
Following gene: 87199862
Centisome position: 54.6
GC content: 60.35
Gene sequence:
>285_bases ATGGACTTCATATCGATCCTGAGCATTTTCGTGCTCGCCTGCTTTGTCGGGTACTACGTCGTCTGGTCGGTCACGCCGGC CCTTCACACGCCGCTGATGGCGGTAACGAACGCCATTTCTTCTGTCATCGTGGTCGGCGCGCTTGTCGCTTCGGCAGCGG CCGGTAGCCCTTCGGCCAAGTGGCTTGGGCTGGGTGCGGTCGTTCTGGCAAGCGTCAACATCTTCGGCGGGTTCGCCGTG ACCGCGCGCATGCTGGCGATGTACAAGAAGAAGGAGAAGAAGTGA
Upstream 100 bases:
>100_bases AGGGCAAGCCCGTTCTGGACGAGGAAATCGGCAACGCCATCCGCCTGACGCAGGGCGGCAAGGTGGTCAACGAACGTCTG CTCGGCTGAGGGGGCCTGAC
Downstream 100 bases:
>100_bases TGGAACACGTCGCTGTCTCTCCCTGGGTCGCACTGGCCTATCTCGTCTCGGGCGTCCTGTTCATCCTCGCGCTGCGCGGG CTTTCCAGCCCCGCGACGAG
Product: putative NAD(P) transhydrogenase subunit alpha transmembrane protein
Products: NA
Alternate protein names: Nicotinamide nucleotide transhydrogenase subunit alpha 2; Proton-translocating transhydrogenase component 2; Pyridine nucleotide transhydrogenase subunit alpha 2; dII [H]
Number of amino acids: Translated: 94; Mature: 94
Protein sequence:
>94_residues MDFISILSIFVLACFVGYYVVWSVTPALHTPLMAVTNAISSVIVVGALVASAAAGSPSAKWLGLGAVVLASVNIFGGFAV TARMLAMYKKKEKK
Sequences:
>Translated_94_residues MDFISILSIFVLACFVGYYVVWSVTPALHTPLMAVTNAISSVIVVGALVASAAAGSPSAKWLGLGAVVLASVNIFGGFAV TARMLAMYKKKEKK >Mature_94_residues MDFISILSIFVLACFVGYYVVWSVTPALHTPLMAVTNAISSVIVVGALVASAAAGSPSAKWLGLGAVVLASVNIFGGFAV TARMLAMYKKKEKK
Specific function: The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane [H]
COG id: COG3288
COG function: function code C; NAD/NADP transhydrogenase alpha subunit
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI122939155, Length=90, Percent_Identity=51.1111111111111, Blast_Score=86, Evalue=6e-18, Organism=Homo sapiens, GI122939153, Length=90, Percent_Identity=51.1111111111111, Blast_Score=86, Evalue=6e-18, Organism=Escherichia coli, GI1787887, Length=90, Percent_Identity=57.7777777777778, Blast_Score=103, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17550456, Length=91, Percent_Identity=51.6483516483517, Blast_Score=89, Evalue=5e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: =1.6.1.2 [H]
Molecular weight: Translated: 9809; Mature: 9809
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFISILSIFVLACFVGYYVVWSVTPALHTPLMAVTNAISSVIVVGALVASAAAGSPSAK CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH WLGLGAVVLASVNIFGGFAVTARMLAMYKKKEKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDFISILSIFVLACFVGYYVVWSVTPALHTPLMAVTNAISSVIVVGALVASAAAGSPSAK CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH WLGLGAVVLASVNIFGGFAVTARMLAMYKKKEKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8075801 [H]