| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is baeS [H]
Identifier: 87199791
GI number: 87199791
Start: 1871233
End: 1872684
Strand: Direct
Name: baeS [H]
Synonym: Saro_1774
Alternate gene names: 87199791
Gene position: 1871233-1872684 (Clockwise)
Preceding gene: 87199789
Following gene: 87199792
Centisome position: 52.54
GC content: 68.18
Gene sequence:
>1452_bases ATGCGGGTTCGAATCGGAACCATCGTCTTTGCGGGATCGGCCCTGTCTGCGCTGCTCGGGGCGGTCGCGATGGGGCTCGC CATGTGGATTGCCCAGCGCGAAGGCTTTTCGCACTATCTCGCAACCCGCGATGCCGAGCGGCTCGACCAGCTGGTTCGGC GGTTCGACGAGGAGGCTGTCGCGCGAGGCGGAATTGCTGCCTTCAGGGCGGGGCGCTTCACGCTTGGCGAGGCTTTCGGC GCGCTCGGGCCTCCGCCGATAACGGGCCACGTGTCGCCTGAGGGCGACCGCTCACCGCCCAGAGGCCGTCCACCACCGTC GGAAGACATCGGCGGGCGCCTGGTGCTGTTCGATGCCTCGGGCGAGCGCCTTTCCGGCCCTGAGCGTCCGCCTGTGCTGC CAGGCATGGACGGCAGGCCTCCGCCGCCGCGCATCGAGCACCGCACGCTTACGGTCGAAGGCGTGCAGGTCGGCACGATA GCGATGCTGCCCCGCGTTCCGGCAAACGGCGACGTCGAGGCCAGGTTCCTGCAAAGCCAGGTTCGCTATGGCCTGTTGGC CTTGCTCGTGGTCGTTCTGTTGTGCCTCTATCCGTCATGGCTGGTAGGGCGAGCCGGTGCCCGCGCTGCCGGCCGGTTCG CACGCCGCACCGCAGCCATCGCGGCGGGCGACTATTATCGCTACGACCGCAAGCCCAGCTTCGTCGTGGAACTTGACGCC GTGGGGCTGGACTTGTCGCGCATGGCAGGCAGCCTGCAGCGGATGGAAAGCGCGCGCAGGCGCTGGCTTGCCGAGATCGC GCACGAATTGCGAACGCCACTGGCGGTGCTGCGCGGGGAGATCGAAGCCCTGCGCGACGGTATCCGGCAGCCCGGACGCG CCGAGATCGATTCCCTCCTGGCCGAGGCCGGATCGCTCGGCAGACTGGTCGACGACCTGCATTTCCTGTCGGTTTCCGAG CTGGAGGGCATGGCTTGCCACTTCGAGCAGGTCGATCCTGCCGAAATCTGCGGGCTGGCCCTGCGCCGGGCACAGATCCT GTCGAAGGCCGAGGGGCTGTCGTTCGCTCTTTCCGTTAGCGGCAATGGCGTTGGCACGGCTTGGTGGGACCGCGACCGGA TCGACCAGTTGCTCGCCAACCTGCTCGCCAACGCGTGCCGCTACACCGACCGCCCAGGCAAGATCGAGATGCTGCTTCAC GCGGAGCACGACGGGCTGCGGATCGTCATCGACGACACGCCGCCAGGCGTTGATCCCGCCCATTTGCCACACCTGTTCGA GCCCCTCTATCGCGCGGACCCTTCGCGCTCGAGGGCGAGCGGAGGCAGCGGACTGGGGCTTTCGGTCTGCGCCACGATCG TTGAGGCGCATGGCGGAGCGATTGCCGCCGGGTCGTCTCCGTTGGGCGGGCTTCGCGTGACAGTGGACCTTCCGCGCCGG AGCGCCGCATGA
Upstream 100 bases:
>100_bases AACAAAATTGCAAGTCGCTTGCGGCGCGGCGTCCACAAATGATCCATAGTTGGAGGTTAACCCGGTTGGCGCGCGGCGTT CTGTTGCGCATGGAAAGGCC
Downstream 100 bases:
>100_bases ACCTCCAGCCATCCCAGCGCCTTGTCTATGTGGTCGAGGACGATGTCCGGATCGCTTCGGTTCTCAGCGATTACCTGACA GCGGAAGGTTTCCTGCCCCG
Product: periplasmic sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 483; Mature: 483
Protein sequence:
>483_residues MRVRIGTIVFAGSALSALLGAVAMGLAMWIAQREGFSHYLATRDAERLDQLVRRFDEEAVARGGIAAFRAGRFTLGEAFG ALGPPPITGHVSPEGDRSPPRGRPPPSEDIGGRLVLFDASGERLSGPERPPVLPGMDGRPPPPRIEHRTLTVEGVQVGTI AMLPRVPANGDVEARFLQSQVRYGLLALLVVVLLCLYPSWLVGRAGARAAGRFARRTAAIAAGDYYRYDRKPSFVVELDA VGLDLSRMAGSLQRMESARRRWLAEIAHELRTPLAVLRGEIEALRDGIRQPGRAEIDSLLAEAGSLGRLVDDLHFLSVSE LEGMACHFEQVDPAEICGLALRRAQILSKAEGLSFALSVSGNGVGTAWWDRDRIDQLLANLLANACRYTDRPGKIEMLLH AEHDGLRIVIDDTPPGVDPAHLPHLFEPLYRADPSRSRASGGSGLGLSVCATIVEAHGGAIAAGSSPLGGLRVTVDLPRR SAA
Sequences:
>Translated_483_residues MRVRIGTIVFAGSALSALLGAVAMGLAMWIAQREGFSHYLATRDAERLDQLVRRFDEEAVARGGIAAFRAGRFTLGEAFG ALGPPPITGHVSPEGDRSPPRGRPPPSEDIGGRLVLFDASGERLSGPERPPVLPGMDGRPPPPRIEHRTLTVEGVQVGTI AMLPRVPANGDVEARFLQSQVRYGLLALLVVVLLCLYPSWLVGRAGARAAGRFARRTAAIAAGDYYRYDRKPSFVVELDA VGLDLSRMAGSLQRMESARRRWLAEIAHELRTPLAVLRGEIEALRDGIRQPGRAEIDSLLAEAGSLGRLVDDLHFLSVSE LEGMACHFEQVDPAEICGLALRRAQILSKAEGLSFALSVSGNGVGTAWWDRDRIDQLLANLLANACRYTDRPGKIEMLLH AEHDGLRIVIDDTPPGVDPAHLPHLFEPLYRADPSRSRASGGSGLGLSVCATIVEAHGGAIAAGSSPLGGLRVTVDLPRR SAA >Mature_483_residues MRVRIGTIVFAGSALSALLGAVAMGLAMWIAQREGFSHYLATRDAERLDQLVRRFDEEAVARGGIAAFRAGRFTLGEAFG ALGPPPITGHVSPEGDRSPPRGRPPPSEDIGGRLVLFDASGERLSGPERPPVLPGMDGRPPPPRIEHRTLTVEGVQVGTI AMLPRVPANGDVEARFLQSQVRYGLLALLVVVLLCLYPSWLVGRAGARAAGRFARRTAAIAAGDYYRYDRKPSFVVELDA VGLDLSRMAGSLQRMESARRRWLAEIAHELRTPLAVLRGEIEALRDGIRQPGRAEIDSLLAEAGSLGRLVDDLHFLSVSE LEGMACHFEQVDPAEICGLALRRAQILSKAEGLSFALSVSGNGVGTAWWDRDRIDQLLANLLANACRYTDRPGKIEMLLH AEHDGLRIVIDDTPPGVDPAHLPHLFEPLYRADPSRSRASGGSGLGLSVCATIVEAHGGAIAAGSSPLGGLRVTVDLPRR SAA
Specific function: Member of the two-component regulatory system BaeS/BaeR. May activate BaeR by phosphorylation [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788393, Length=463, Percent_Identity=34.341252699784, Blast_Score=208, Evalue=5e-55, Organism=Escherichia coli, GI1790346, Length=243, Percent_Identity=33.3333333333333, Blast_Score=129, Evalue=5e-31, Organism=Escherichia coli, GI1786600, Length=253, Percent_Identity=30.8300395256917, Blast_Score=112, Evalue=5e-26, Organism=Escherichia coli, GI1786783, Length=312, Percent_Identity=26.2820512820513, Blast_Score=102, Evalue=6e-23, Organism=Escherichia coli, GI1787894, Length=332, Percent_Identity=27.4096385542169, Blast_Score=102, Evalue=8e-23, Organism=Escherichia coli, GI1786912, Length=241, Percent_Identity=30.2904564315353, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI145693157, Length=241, Percent_Identity=27.8008298755187, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI1788279, Length=283, Percent_Identity=25.0883392226148, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI87081816, Length=237, Percent_Identity=29.1139240506329, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1789149, Length=241, Percent_Identity=27.8008298755187, Blast_Score=76, Evalue=5e-15, Organism=Escherichia coli, GI1788549, Length=242, Percent_Identity=27.6859504132231, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1789808, Length=243, Percent_Identity=25.9259259259259, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1787374, Length=330, Percent_Identity=25.4545454545455, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1790436, Length=221, Percent_Identity=28.0542986425339, Blast_Score=66, Evalue=6e-12, Organism=Escherichia coli, GI1790551, Length=232, Percent_Identity=28.0172413793103, Blast_Score=62, Evalue=6e-11, Organism=Escherichia coli, GI48994928, Length=240, Percent_Identity=23.3333333333333, Blast_Score=62, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 51802; Mature: 51802
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVRIGTIVFAGSALSALLGAVAMGLAMWIAQREGFSHYLATRDAERLDQLVRRFDEEAV CEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHH ARGGIAAFRAGRFTLGEAFGALGPPPITGHVSPEGDRSPPRGRPPPSEDIGGRLVLFDAS HHCCHHHHHCCCEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC GERLSGPERPPVLPGMDGRPPPPRIEHRTLTVEGVQVGTIAMLPRVPANGDVEARFLQSQ CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECEEEEEEEECCCCCCCCCHHHHHHHHH VRYGLLALLVVVLLCLYPSWLVGRAGARAAGRFARRTAAIAAGDYYRYDRKPSFVVELDA HHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCEEEEEEC VGLDLSRMAGSLQRMESARRRWLAEIAHELRTPLAVLRGEIEALRDGIRQPGRAEIDSLL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH AEAGSLGRLVDDLHFLSVSELEGMACHFEQVDPAEICGLALRRAQILSKAEGLSFALSVS HHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEC GNGVGTAWWDRDRIDQLLANLLANACRYTDRPGKIEMLLHAEHDGLRIVIDDTPPGVDPA CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEECCCCCCCCHH HLPHLFEPLYRADPSRSRASGGSGLGLSVCATIVEAHGGAIAAGSSPLGGLRVTVDLPRR HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCEEEEEECCCC SAA CCC >Mature Secondary Structure MRVRIGTIVFAGSALSALLGAVAMGLAMWIAQREGFSHYLATRDAERLDQLVRRFDEEAV CEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHH ARGGIAAFRAGRFTLGEAFGALGPPPITGHVSPEGDRSPPRGRPPPSEDIGGRLVLFDAS HHCCHHHHHCCCEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC GERLSGPERPPVLPGMDGRPPPPRIEHRTLTVEGVQVGTIAMLPRVPANGDVEARFLQSQ CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECEEEEEEEECCCCCCCCCHHHHHHHHH VRYGLLALLVVVLLCLYPSWLVGRAGARAAGRFARRTAAIAAGDYYRYDRKPSFVVELDA HHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCEEEEEEC VGLDLSRMAGSLQRMESARRRWLAEIAHELRTPLAVLRGEIEALRDGIRQPGRAEIDSLL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH AEAGSLGRLVDDLHFLSVSELEGMACHFEQVDPAEICGLALRRAQILSKAEGLSFALSVS HHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEC GNGVGTAWWDRDRIDQLLANLLANACRYTDRPGKIEMLLHAEHDGLRIVIDDTPPGVDPA CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEECCCCCCCCHH HLPHLFEPLYRADPSRSRASGGSGLGLSVCATIVEAHGGAIAAGSSPLGGLRVTVDLPRR HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCEEEEEECCCC SAA CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8282725; 9097040; 9278503 [H]