Click here to switch to the map view.

The map label for this gene is 87199781

Identifier: 87199781

GI number: 87199781

Start: 1860227

End: 1861168

Strand: Direct

Name: 87199781

Synonym: Saro_1764

Alternate gene names: NA

Gene position: 1860227-1861168 (Clockwise)

Preceding gene: 87199777

Following gene: 87199782

Centisome position: 52.23

GC content: 64.54

Gene sequence:

>942_bases
ATGCGGCTCAATCGCCTTCTTGCTGGACCGGTCGGTGTGGCCGTGACGTTCTTCGTCCTGGCGAGCACGACCGTGCATTT
TGCGCGGTTCTCGGGCGGCGTGGCGATGGTCTGGGTGGCCGGGGCCATGCTTGCGGGCCGGCTCATCGTCCTTCCGGAGC
GGCAGTGGATGCCCTGGCTTCTCTGGTCCGGGGTGGCGAGCGTGATGGTGACCGGGCTGTATGGGCTGGGCTGGCTGGCC
GCAGTTCCCTTTGCCGTGGTGAACGTGGCCGAGGCCGCCGCCGCGGCGCTCATCTGGCGACGGATAACGGAAGCGTTCTG
GCCTGACGAGACGGTCGAATGGCTCGCCGCCTTCTACATCGGTATCGGCCTGAGCATTCCGCTGGCGTCGGGCGGTGTCG
CCACACTCGTGGCATGGGCCTTTGTCGGCCTGCCGCCTGTCGAGAACTTTCTTCACTGGATCGTGGGGCATGCGCTCGGC
CTGATTGCCTGCCTGCCGGTCTTTACGTTCATCTACCGTCGCGCCGAACGCGGGCGCAGCATCCTGCCGAGTGCCGAAGC
CTTGCCTGTAAGCCTGCTGGTGCTATTCTGCTTCGCCTTGCTCACGGGCCTGGTGTTCGTGCTCGACATGCGTGCGCTTC
TCGTCTTTCCGCTGCTCTTCTTCGTCGTTGGCACGGCCGTTCTCGATGAAGAGACCGTCGTTTTCTTTCCGATCCTGCTT
ATTCTCATCGGCGGTACGCTGACCGGGCTCGACATGGGGCCGATCGCGCAGATGGACGTGGATTACGGCGACCGCATCCA
GTTCTTCCAGCTCTACGTCGGCGTTGCCGTCCTCGCCGCCTTGCCGATCTCGTGCGAGCGAACGCGCCGCCTTCAGGAAC
TCAGGGTCATGCGAGAGCGTTTGGCGCTGTTCGAGGGCTCGGGGAACCGTCACCCGGATTGA

Upstream 100 bases:

>100_bases
CACGCTCGTGGTCGTGGCGTTAGCGCTCACTTACATAGTCGGCCTCTTATTGCGTTGAACCGGCTGCGAAATATTAACGC
TCCCCGCGCAATGTCGGGGA

Downstream 100 bases:

>100_bases
CTGTTGCGCCGACGGCCATTGCCGTTTGCGCCGCAGGGCCCTAAATCCGCACGGCCAGATCCGGCCGAATACATCCAAAG
GGCTGCTTCTTGATCCTGTC

Product: putative integral membrane sensor protein

Products: NA

Alternate protein names: Diguanylate Cyclase

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MRLNRLLAGPVGVAVTFFVLASTTVHFARFSGGVAMVWVAGAMLAGRLIVLPERQWMPWLLWSGVASVMVTGLYGLGWLA
AVPFAVVNVAEAAAAALIWRRITEAFWPDETVEWLAAFYIGIGLSIPLASGGVATLVAWAFVGLPPVENFLHWIVGHALG
LIACLPVFTFIYRRAERGRSILPSAEALPVSLLVLFCFALLTGLVFVLDMRALLVFPLLFFVVGTAVLDEETVVFFPILL
ILIGGTLTGLDMGPIAQMDVDYGDRIQFFQLYVGVAVLAALPISCERTRRLQELRVMRERLALFEGSGNRHPD

Sequences:

>Translated_313_residues
MRLNRLLAGPVGVAVTFFVLASTTVHFARFSGGVAMVWVAGAMLAGRLIVLPERQWMPWLLWSGVASVMVTGLYGLGWLA
AVPFAVVNVAEAAAAALIWRRITEAFWPDETVEWLAAFYIGIGLSIPLASGGVATLVAWAFVGLPPVENFLHWIVGHALG
LIACLPVFTFIYRRAERGRSILPSAEALPVSLLVLFCFALLTGLVFVLDMRALLVFPLLFFVVGTAVLDEETVVFFPILL
ILIGGTLTGLDMGPIAQMDVDYGDRIQFFQLYVGVAVLAALPISCERTRRLQELRVMRERLALFEGSGNRHPD
>Mature_313_residues
MRLNRLLAGPVGVAVTFFVLASTTVHFARFSGGVAMVWVAGAMLAGRLIVLPERQWMPWLLWSGVASVMVTGLYGLGWLA
AVPFAVVNVAEAAAAALIWRRITEAFWPDETVEWLAAFYIGIGLSIPLASGGVATLVAWAFVGLPPVENFLHWIVGHALG
LIACLPVFTFIYRRAERGRSILPSAEALPVSLLVLFCFALLTGLVFVLDMRALLVFPLLFFVVGTAVLDEETVVFFPILL
ILIGGTLTGLDMGPIAQMDVDYGDRIQFFQLYVGVAVLAALPISCERTRRLQELRVMRERLALFEGSGNRHPD

Specific function: Unknown

COG id: COG3447

COG function: function code T; Predicted integral membrane sensor domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34157; Mature: 34157

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLNRLLAGPVGVAVTFFVLASTTVHFARFSGGVAMVWVAGAMLAGRLIVLPERQWMPWL
CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCEEEEECCCCCCHHH
LWSGVASVMVTGLYGLGWLAAVPFAVVNVAEAAAAALIWRRITEAFWPDETVEWLAAFYI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
GIGLSIPLASGGVATLVAWAFVGLPPVENFLHWIVGHALGLIACLPVFTFIYRRAERGRS
HHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ILPSAEALPVSLLVLFCFALLTGLVFVLDMRALLVFPLLFFVVGTAVLDEETVVFFPILL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ILIGGTLTGLDMGPIAQMDVDYGDRIQFFQLYVGVAVLAALPISCERTRRLQELRVMRER
HHHCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LALFEGSGNRHPD
HHHHCCCCCCCCC
>Mature Secondary Structure
MRLNRLLAGPVGVAVTFFVLASTTVHFARFSGGVAMVWVAGAMLAGRLIVLPERQWMPWL
CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCEEEEECCCCCCHHH
LWSGVASVMVTGLYGLGWLAAVPFAVVNVAEAAAAALIWRRITEAFWPDETVEWLAAFYI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
GIGLSIPLASGGVATLVAWAFVGLPPVENFLHWIVGHALGLIACLPVFTFIYRRAERGRS
HHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ILPSAEALPVSLLVLFCFALLTGLVFVLDMRALLVFPLLFFVVGTAVLDEETVVFFPILL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ILIGGTLTGLDMGPIAQMDVDYGDRIQFFQLYVGVAVLAALPISCERTRRLQELRVMRER
HHHCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LALFEGSGNRHPD
HHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA