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The map label for this gene is cycA [H]

Identifier: 87199706

GI number: 87199706

Start: 1772244

End: 1772702

Strand: Direct

Name: cycA [H]

Synonym: Saro_1689

Alternate gene names: 87199706

Gene position: 1772244-1772702 (Clockwise)

Preceding gene: 87199705

Following gene: 87199707

Centisome position: 49.76

GC content: 69.93

Gene sequence:

>459_bases
ATGAAGGCGCTTTTCGGCCTCGTCCCCGCGGCTGCGCTGCTCGCGCTCGCATTGCCGGCGGATGCCGCGCCCGATGGAGC
GACGGTCTTTGCCCGCTGCGCGGCTTGCCACACACGCACCGGCGCGGGCGTTCCGGGCGCCTATCCCCCGCTGGGTGCCG
ATTTCCGCGCGCTGGCCGCCAAGTCCGCCGGCCGCCGCTATCTCGCGCTCGCGGTGATCAAGGGGCTTTCGGGGCCGATC
ACCGTGGAAGGCAAGCCCTATCGCGGCGTCATGCCAGCCCAGGTGCTGGACGATGCGACGACTGCTGCCGTCCTCAACCA
CGTCGGCACGCAGATTGCGAAGACGGGCCCTGCCTTCAAGCCCTTCACCGACAAGGAGGTGGCCGGGCACCGGGCATCGG
GTTCCGGCCTCTCCGCCGCTGATGTCGCCAAACTCCATGCCGGGGTAGGCGGGAAATGA

Upstream 100 bases:

>100_bases
CGCAGTCGAACAACGACTACAACTGGTGCCTGGGCACCGAAAGCAGCGTCTACAACTGCTCGACGGCGGTGATTGTCGGC
GTCGCGCTGGACGCGCCGAA

Downstream 100 bases:

>100_bases
AGCGGGCCGCGCTCGGATTGGCGGCACTCGTGGCCGCGACGGCCGTGGGTGCAGCGGTCCGGGCCGGCGAGCCTGCGATG
CGCGGGGTAACCAGCCCGCA

Product: cytochrome c, class I

Products: NA

Alternate protein names: Cytochrome c552 [H]

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MKALFGLVPAAALLALALPADAAPDGATVFARCAACHTRTGAGVPGAYPPLGADFRALAAKSAGRRYLALAVIKGLSGPI
TVEGKPYRGVMPAQVLDDATTAAVLNHVGTQIAKTGPAFKPFTDKEVAGHRASGSGLSAADVAKLHAGVGGK

Sequences:

>Translated_152_residues
MKALFGLVPAAALLALALPADAAPDGATVFARCAACHTRTGAGVPGAYPPLGADFRALAAKSAGRRYLALAVIKGLSGPI
TVEGKPYRGVMPAQVLDDATTAAVLNHVGTQIAKTGPAFKPFTDKEVAGHRASGSGLSAADVAKLHAGVGGK
>Mature_152_residues
MKALFGLVPAAALLALALPADAAPDGATVFARCAACHTRTGAGVPGAYPPLGADFRALAAKSAGRRYLALAVIKGLSGPI
TVEGKPYRGVMPAQVLDDATTAAVLNHVGTQIAKTGPAFKPFTDKEVAGHRASGSGLSAADVAKLHAGVGGK

Specific function: This monoheme basic protein appears to function as an electron donor to cytochrome oxidase in T.thermophilus [H]

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 15083; Mature: 15083

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALFGLVPAAALLALALPADAAPDGATVFARCAACHTRTGAGVPGAYPPLGADFRALAA
CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
KSAGRRYLALAVIKGLSGPITVEGKPYRGVMPAQVLDDATTAAVLNHVGTQIAKTGPAFK
HHCCCHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PFTDKEVAGHRASGSGLSAADVAKLHAGVGGK
CCCCCHHCCCCCCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MKALFGLVPAAALLALALPADAAPDGATVFARCAACHTRTGAGVPGAYPPLGADFRALAA
CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
KSAGRRYLALAVIKGLSGPITVEGKPYRGVMPAQVLDDATTAAVLNHVGTQIAKTGPAFK
HHCCCHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PFTDKEVAGHRASGSGLSAADVAKLHAGVGGK
CCCCCHHCCCCCCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2986626; 11152119 [H]