Click here to switch to the map view.

The map label for this gene is 87199647

Identifier: 87199647

GI number: 87199647

Start: 1705501

End: 1706886

Strand: Direct

Name: 87199647

Synonym: Saro_1630

Alternate gene names: NA

Gene position: 1705501-1706886 (Clockwise)

Preceding gene: 87199646

Following gene: 87199650

Centisome position: 47.89

GC content: 68.47

Gene sequence:

>1386_bases
ATGAGCCGCGTCGCGCGCTATCGCACGATTCAGCGCTGGCACTTCCTGGCCGGCCTGTTCGTGATGCCGATGCTCCTGCT
GCTGTCGGTGACGGGGGGAATCTATCTGTTCAAGCCGCAGGTTGATGCCTGGGAGGAGCGGGCGTTCGACGCGGCTGCCA
TGGCCGAGGCGCCATCGCTGGCGGTCGCGCCGGATGACCATGTGGCGGCCGCTCTGCGGGCATTTCCGCATGGCTCGTTC
CGGTCCTACCGCCTGCCGCGCTCAGAGGGCGCGGCAGCGCTCGTGCTTGTCGGTCTTCCCGACGGAGGCTCTCGCGAAGT
ATTCGTTTCTCCGCACGGCAGGGTCGTTGGCACCATGGATCCGCGCTGGCGGATCATGCAAGTGGTCCACGACGTTCACG
GGCAGTTGCTTGTCGGTCCGCGCGGGAGCTGGCTGGTCGAACTGGCTGCCAGTTGGTCCATCGCGATGATCGCGGGCGGG
CTCTACCTTTGGTGGCCACGCGGGCGGGGCACTGCGGGCGTCCTGTGGCCGCGGCTGCATCTTGGCGCGAGGGCGGCCCT
GCGCGACATGCATGCGGTGACCGGCTTCTGGGTTTCCGGGCTTGCGCTTGTCCTGCTGGTGACTGGCCTGCCGTGGGCGG
ACGTCTGGGGCAGCGCCTTCAAGGCGGTGCGGGCCGAGTTCGGCTGGCAGAAGGGCGTGCAGGACTGGACCATCGGCGGA
CGTGCGCCCGATGCCGGTGAGCACTTCGGGCATGAAGGCATGGGGGATGCCGCGCAATCGCCGGTTACGGGGCGGCCGGT
CCACGCGCATGGAAGCCATCATGGGAACGGCGCGACCGGCCCGTTCCTCGCCGAGATCGTGGCCAGGGCAAAGAGTGAGC
GGCTTGCATTTCCCGTGGTGGTGACGCCCCCGGGCGCACCCGGTCGCTTTGGAGGAAATAGCGTTGCGGCGTGGACCGTG
CGCTCGGACACGCAGAACCGGACCTTGCGGGTGACGCTTACCTATGATGCGCGAAACGGGCGCGAGACATCTCGCGAAAC
CTTTGCCGACAGGCATCCCATCGACCGGGTCATCGGATATGGCGTCGCGTGGCATGAGGGGCAGCTCTTCGGGCCGGTCA
ACCAACTGATCGGCGTGCTGACCGTGACCGGGCTTGCCGGGATGAGCGTGACCGGTTTCCTGATGTGGCGGCGGCGCAAG
TCCGCGGCCGGTGTCGGGGTGCCCGCTGCCGCGCGGTCCGGCCGTGCAGGGTGGGGATCTTGGCTGGCGCTTGGCACGCT
GGCGGCGGTGTTGCCGCTGCTTGCCTTGTCGCTGGTGGCGGTCCTGGCGCTGCAATGGCTGCGGCAACGCACGCCGGATA
GCGGAACCGGGCGACTGGCCTCGTAA

Upstream 100 bases:

>100_bases
TGCGCCTGTCTGCTGGCGTGGACAACCTGACCAATGATCGTGCGTGGGTCTTCCATCCTTACTCGCAGCGCACCTTCTTC
CTGGAAGCGGGGTGGACGTT

Downstream 100 bases:

>100_bases
GTTGAACGAGAGGGGCGCCTTGCCGGCGCCCCTTTTTAAGCGATCAGGCGGTACCCGAAGCCACGCACGTTTTCGACCAC
TGGCGGGCCGAGGGCGTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Iron-Regulated Membrane Protein; PepSY-Associated TM Helix Domain Protein; PepSY-Associated TM Helix Domain-Containing Protein; PepSY-Associated TM Helix Family; Sulfite Reductase; Peptidase; PepSY-Associated TM Helix; PepSY-Associated Membrane Protein; PepSY-Associated TM Helix Containing Protein; Pepsy-Associated Tm Helix Domain Protein; Outer Membrane Protein; PepSY Amd Peptidase M4 Protein; Conserved Iron-Regulated Membrane Protein; M4 Family Peptidase; Bifunctional Sulfite Reductase; PepSY-Associated TM Helix Family Protein; Sulfite Reductase Flavoprotein Subunit Alpha; Transmembrane Transporter

Number of amino acids: Translated: 461; Mature: 460

Protein sequence:

>461_residues
MSRVARYRTIQRWHFLAGLFVMPMLLLLSVTGGIYLFKPQVDAWEERAFDAAAMAEAPSLAVAPDDHVAAALRAFPHGSF
RSYRLPRSEGAAALVLVGLPDGGSREVFVSPHGRVVGTMDPRWRIMQVVHDVHGQLLVGPRGSWLVELAASWSIAMIAGG
LYLWWPRGRGTAGVLWPRLHLGARAALRDMHAVTGFWVSGLALVLLVTGLPWADVWGSAFKAVRAEFGWQKGVQDWTIGG
RAPDAGEHFGHEGMGDAAQSPVTGRPVHAHGSHHGNGATGPFLAEIVARAKSERLAFPVVVTPPGAPGRFGGNSVAAWTV
RSDTQNRTLRVTLTYDARNGRETSRETFADRHPIDRVIGYGVAWHEGQLFGPVNQLIGVLTVTGLAGMSVTGFLMWRRRK
SAAGVGVPAAARSGRAGWGSWLALGTLAAVLPLLALSLVAVLALQWLRQRTPDSGTGRLAS

Sequences:

>Translated_461_residues
MSRVARYRTIQRWHFLAGLFVMPMLLLLSVTGGIYLFKPQVDAWEERAFDAAAMAEAPSLAVAPDDHVAAALRAFPHGSF
RSYRLPRSEGAAALVLVGLPDGGSREVFVSPHGRVVGTMDPRWRIMQVVHDVHGQLLVGPRGSWLVELAASWSIAMIAGG
LYLWWPRGRGTAGVLWPRLHLGARAALRDMHAVTGFWVSGLALVLLVTGLPWADVWGSAFKAVRAEFGWQKGVQDWTIGG
RAPDAGEHFGHEGMGDAAQSPVTGRPVHAHGSHHGNGATGPFLAEIVARAKSERLAFPVVVTPPGAPGRFGGNSVAAWTV
RSDTQNRTLRVTLTYDARNGRETSRETFADRHPIDRVIGYGVAWHEGQLFGPVNQLIGVLTVTGLAGMSVTGFLMWRRRK
SAAGVGVPAAARSGRAGWGSWLALGTLAAVLPLLALSLVAVLALQWLRQRTPDSGTGRLAS
>Mature_460_residues
SRVARYRTIQRWHFLAGLFVMPMLLLLSVTGGIYLFKPQVDAWEERAFDAAAMAEAPSLAVAPDDHVAAALRAFPHGSFR
SYRLPRSEGAAALVLVGLPDGGSREVFVSPHGRVVGTMDPRWRIMQVVHDVHGQLLVGPRGSWLVELAASWSIAMIAGGL
YLWWPRGRGTAGVLWPRLHLGARAALRDMHAVTGFWVSGLALVLLVTGLPWADVWGSAFKAVRAEFGWQKGVQDWTIGGR
APDAGEHFGHEGMGDAAQSPVTGRPVHAHGSHHGNGATGPFLAEIVARAKSERLAFPVVVTPPGAPGRFGGNSVAAWTVR
SDTQNRTLRVTLTYDARNGRETSRETFADRHPIDRVIGYGVAWHEGQLFGPVNQLIGVLTVTGLAGMSVTGFLMWRRRKS
AAGVGVPAAARSGRAGWGSWLALGTLAAVLPLLALSLVAVLALQWLRQRTPDSGTGRLAS

Specific function: Unknown

COG id: COG3182

COG function: function code S; Uncharacterized iron-regulated membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49503; Mature: 49371

Theoretical pI: Translated: 11.53; Mature: 11.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRVARYRTIQRWHFLAGLFVMPMLLLLSVTGGIYLFKPQVDAWEERAFDAAAMAEAPSL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCCCE
AVAPDDHVAAALRAFPHGSFRSYRLPRSEGAAALVLVGLPDGGSREVFVSPHGRVVGTMD
EECCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEECCCCCEEECCC
PRWRIMQVVHDVHGQLLVGPRGSWLVELAASWSIAMIAGGLYLWWPRGRGTAGVLWPRLH
CHHHHHHHHHHHCCEEEECCCCCEEEEHHCCCCEEHEECCEEEEECCCCCCCCEECHHHH
LGARAALRDMHAVTGFWVSGLALVLLVTGLPWADVWGSAFKAVRAEFGWQKGVQDWTIGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHCCCCCEECCC
RAPDAGEHFGHEGMGDAAQSPVTGRPVHAHGSHHGNGATGPFLAEIVARAKSERLAFPVV
CCCCCHHHCCCCCCCHHHCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEE
VTPPGAPGRFGGNSVAAWTVRSDTQNRTLRVTLTYDARNGRETSRETFADRHPIDRVIGY
ECCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCHHHHHHHHCCCHHHHHHC
GVAWHEGQLFGPVNQLIGVLTVTGLAGMSVTGFLMWRRRKSAAGVGVPAAARSGRAGWGS
CCEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHCCCCCCCHHH
WLALGTLAAVLPLLALSLVAVLALQWLRQRTPDSGTGRLAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SRVARYRTIQRWHFLAGLFVMPMLLLLSVTGGIYLFKPQVDAWEERAFDAAAMAEAPSL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCCCE
AVAPDDHVAAALRAFPHGSFRSYRLPRSEGAAALVLVGLPDGGSREVFVSPHGRVVGTMD
EECCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEECCCCCEEECCC
PRWRIMQVVHDVHGQLLVGPRGSWLVELAASWSIAMIAGGLYLWWPRGRGTAGVLWPRLH
CHHHHHHHHHHHCCEEEECCCCCEEEEHHCCCCEEHEECCEEEEECCCCCCCCEECHHHH
LGARAALRDMHAVTGFWVSGLALVLLVTGLPWADVWGSAFKAVRAEFGWQKGVQDWTIGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHCCCCCEECCC
RAPDAGEHFGHEGMGDAAQSPVTGRPVHAHGSHHGNGATGPFLAEIVARAKSERLAFPVV
CCCCCHHHCCCCCCCHHHCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEE
VTPPGAPGRFGGNSVAAWTVRSDTQNRTLRVTLTYDARNGRETSRETFADRHPIDRVIGY
ECCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCHHHHHHHHCCCHHHHHHC
GVAWHEGQLFGPVNQLIGVLTVTGLAGMSVTGFLMWRRRKSAAGVGVPAAARSGRAGWGS
CCEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHCCCCCCCHHH
WLALGTLAAVLPLLALSLVAVLALQWLRQRTPDSGTGRLAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA