| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199645
Identifier: 87199645
GI number: 87199645
Start: 1702722
End: 1703126
Strand: Direct
Name: 87199645
Synonym: Saro_1628
Alternate gene names: NA
Gene position: 1702722-1703126 (Clockwise)
Preceding gene: 87199644
Following gene: 87199646
Centisome position: 47.81
GC content: 69.88
Gene sequence:
>405_bases ATGGGGCGCCTCCGATACTTTCTTCTGGCCCGCCGGGGCCTTGTGCTCGCGCTCGTCGCGCTGGCGATCGGCATGAAGGC GCTGGTTCCGGCCGGTTTCATGGTGGAGACGCACGGGCGTGTCCTGACGGTGGCGATCTGTTCGGACGCCAGCGGCCTGC CAAAGACCACCCGGGAAATCGCCGTACCGTCGAAGGAACCGCGGCGCCAGGGCGGAGAGACGGGCGAGGCCTGTCCGTAC GGAGCGCTTTCCATGGCCGCGCTGGGGGCAGGGGCCGATCCGGCGCTTCTTCTGCTCGCGCTCGCCTTCATCCTCCTGCG CGGCTTCCTGCCGGTCCCCGCACTGCGGCTGACGTCCGCGCGCCGAATTCGTCCCCCGCTTCGCGCTCCACCAGTCTTCG GCTGA
Upstream 100 bases:
>100_bases CGGTGCGGTCAACCGGGTTCGCCGGATTTTTTGTCTTCATTCGGTTTTCATGCACGCGACCGTGACAGCACGGCTTCGGA TGGCTAGAGGCGCGTGCGTC
Downstream 100 bases:
>100_bases TCTCCATCCAGACCCGGCCTGCTTGGCAGGCCGCAGAGACAGCATGCCCGCGCAATGCGGCGGGCGGGACGAAGGCTTGT ATAATGACGACATCACATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MGRLRYFLLARRGLVLALVALAIGMKALVPAGFMVETHGRVLTVAICSDASGLPKTTREIAVPSKEPRRQGGETGEACPY GALSMAALGAGADPALLLLALAFILLRGFLPVPALRLTSARRIRPPLRAPPVFG
Sequences:
>Translated_134_residues MGRLRYFLLARRGLVLALVALAIGMKALVPAGFMVETHGRVLTVAICSDASGLPKTTREIAVPSKEPRRQGGETGEACPY GALSMAALGAGADPALLLLALAFILLRGFLPVPALRLTSARRIRPPLRAPPVFG >Mature_133_residues GRLRYFLLARRGLVLALVALAIGMKALVPAGFMVETHGRVLTVAICSDASGLPKTTREIAVPSKEPRRQGGETGEACPYG ALSMAALGAGADPALLLLALAFILLRGFLPVPALRLTSARRIRPPLRAPPVFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14083; Mature: 13952
Theoretical pI: Translated: 11.80; Mature: 11.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRLRYFLLARRGLVLALVALAIGMKALVPAGFMVETHGRVLTVAICSDASGLPKTTREI CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCCCCCCHHHH AVPSKEPRRQGGETGEACPYGALSMAALGAGADPALLLLALAFILLRGFLPVPALRLTSA CCCCCCHHHCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCH RRIRPPLRAPPVFG HHCCCCCCCCCCCC >Mature Secondary Structure GRLRYFLLARRGLVLALVALAIGMKALVPAGFMVETHGRVLTVAICSDASGLPKTTREI CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCCCCCCHHHH AVPSKEPRRQGGETGEACPYGALSMAALGAGADPALLLLALAFILLRGFLPVPALRLTSA CCCCCCHHHCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCH RRIRPPLRAPPVFG HHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA