Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87199537

Identifier: 87199537

GI number: 87199537

Start: 1564000

End: 1564533

Strand: Direct

Name: 87199537

Synonym: Saro_1519

Alternate gene names: NA

Gene position: 1564000-1564533 (Clockwise)

Preceding gene: 87199536

Following gene: 87199538

Centisome position: 43.91

GC content: 61.42

Gene sequence:

>534_bases
ATGAGTGGCGCGACTTTCCTTGAGCGCATCCGGCGCGATAGTCGCGGAGCGGCGGCTGCGGAAACGGTACTCGTCATGCC
GCTTGCCATCTTGATGATTTTCGTGGCGCTGGAGGCTGGCTTCTACCTCTACACCGAGCATCAGGTGGTGAACGGCGTGC
GAGATGCCGCCCGATACGCCGCTCGGCTGGACATGGTCAGCGTGTGGGGCTGCACGGGTGCGACGAACGACATGGCCTAT
ACCGGCTCGCAGCTCGCGCCGATCAGGAACGTTGCAAGGTTCGGCGTAGCCACGACAACCGGAACGCCGGTCGCGAGGCC
ATGGACCTGGGACGAGGCTGAAGTCGAGGTTCGCTACAAGTGCGTTTCCGACGCGCAATATACCGGAATCTATACCGACC
ATTCCAATGGCTATGCGCCAGTCATCACGGTGATTGGCAGGCCCAACTATCCCAGTCTTTTCGGTACGTTGGCCGGGTTC
GACACGACCTTGCACCTTTATGCGAAGCAGGAAGCGGCGGGGGCGGGCGTATGA

Upstream 100 bases:

>100_bases
CCGCCGAAGTCTACGTAGAGGTCGTGTCCATCGCCAAGCCGGGCAACGATGACGGCGGCGATGCAAACGTCATTCGTCGC
GACAAGCCGTACCTTGTCAA

Downstream 100 bases:

>100_bases
GGCTCCTGCATGCATTTCTGGGCGATGAGCGAGGGGCGTCGGCGGCCGAATTCGTACTCGTGTTGCCGATCCTGATCCTG
TTCGTCTTTGGCGTGCTGGA

Product: TadE-like protein

Products: NA

Alternate protein names: Tight Adherance Protein TadE

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MSGATFLERIRRDSRGAAAAETVLVMPLAILMIFVALEAGFYLYTEHQVVNGVRDAARYAARLDMVSVWGCTGATNDMAY
TGSQLAPIRNVARFGVATTTGTPVARPWTWDEAEVEVRYKCVSDAQYTGIYTDHSNGYAPVITVIGRPNYPSLFGTLAGF
DTTLHLYAKQEAAGAGV

Sequences:

>Translated_177_residues
MSGATFLERIRRDSRGAAAAETVLVMPLAILMIFVALEAGFYLYTEHQVVNGVRDAARYAARLDMVSVWGCTGATNDMAY
TGSQLAPIRNVARFGVATTTGTPVARPWTWDEAEVEVRYKCVSDAQYTGIYTDHSNGYAPVITVIGRPNYPSLFGTLAGF
DTTLHLYAKQEAAGAGV
>Mature_176_residues
SGATFLERIRRDSRGAAAAETVLVMPLAILMIFVALEAGFYLYTEHQVVNGVRDAARYAARLDMVSVWGCTGATNDMAYT
GSQLAPIRNVARFGVATTTGTPVARPWTWDEAEVEVRYKCVSDAQYTGIYTDHSNGYAPVITVIGRPNYPSLFGTLAGFD
TTLHLYAKQEAAGAGV

Specific function: Unknown

COG id: COG4961

COG function: function code U; Flp pilus assembly protein TadG

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19137; Mature: 19006

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGATFLERIRRDSRGAAAAETVLVMPLAILMIFVALEAGFYLYTEHQVVNGVRDAARYA
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHH
ARLDMVSVWGCTGATNDMAYTGSQLAPIRNVARFGVATTTGTPVARPWTWDEAEVEVRYK
HHHHHHEEECCCCCCCCCEECCCCHHHHHHHHHHCCEECCCCCCCCCCCCCCCCEEEEEE
CVSDAQYTGIYTDHSNGYAPVITVIGRPNYPSLFGTLAGFDTTLHLYAKQEAAGAGV
EECCCEEEEEEEECCCCCEEEEEEEECCCCHHHHHHHHCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure 
SGATFLERIRRDSRGAAAAETVLVMPLAILMIFVALEAGFYLYTEHQVVNGVRDAARYA
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHH
ARLDMVSVWGCTGATNDMAYTGSQLAPIRNVARFGVATTTGTPVARPWTWDEAEVEVRYK
HHHHHHEEECCCCCCCCCEECCCCHHHHHHHHHHCCEECCCCCCCCCCCCCCCCEEEEEE
CVSDAQYTGIYTDHSNGYAPVITVIGRPNYPSLFGTLAGFDTTLHLYAKQEAAGAGV
EECCCEEEEEEEECCCCCEEEEEEEECCCCHHHHHHHHCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA