Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87199466

Identifier: 87199466

GI number: 87199466

Start: 1489133

End: 1489693

Strand: Direct

Name: 87199466

Synonym: Saro_1445

Alternate gene names: NA

Gene position: 1489133-1489693 (Clockwise)

Preceding gene: 87199465

Following gene: 87199467

Centisome position: 41.81

GC content: 65.95

Gene sequence:

>561_bases
ATGTTCGACAGGATCGTCAACTGGGCGCGGGCCAACATGCCGACGCGGGAGCAGATGGAGCAGAACCGCTTCGCGCGCCC
GCTTGCCGCGCGCCATGAACTCTGGCGCTTCACTCGCCGTTCGGTGCCCCGGGGCGTTGCGGCTGGCCTGTTCATCGGCA
TTTTCGCGCTGATCCCGGGCGTCCAGATCGTCGGTGCCGCGCTCATGTGCGTGCCGGTGCGCGGCAACATTCCGCTGGCC
GTGCTGATGACTTTCGTGTCGATCCCGCCGACGACGCTGTTCGTCTTCCTTCCCGGCGCAATCTGGGTCGGCAATCGCTT
TGGCTACCACGCCGATTTCTCGACCGTGAGCGATCTCGTTACGCGAGGCGCTTCGGTCGGAGACTGGCTTGCCTGGCTTG
GCAGCGATGCGGCGCCTTCGCTGATCATCGGCCTTCTGCTTATCTCGCTGGCGGCGGCCGCCATCGGTTACTTCATCTCG
GCTATCGGGTGGCGCTGGTGGACGGGGCACAAGCGCAAGGCCCGGCAGATGCGTGCCGCTGCCCGGGATTTCCCCGACTG
A

Upstream 100 bases:

>100_bases
TTCCCTGCGGCGCTTCAGCGCGCTGAAAGAGGTGGTCGTCCAACAGTGGTCAAACGTCCCGTGGCGGGGCGGACGGGAAA
CGGGTAGAACGCAAGTCACG

Downstream 100 bases:

>100_bases
TGGCGTCACGCGGGGGCGACACGGCCGCCGGTCCGTCCGGCCTGGCGCCGATGCGGGACTGGCTCCTGCTGGGCGGCGCG
GTTTCGGCTAGTGCTGTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MFDRIVNWARANMPTREQMEQNRFARPLAARHELWRFTRRSVPRGVAAGLFIGIFALIPGVQIVGAALMCVPVRGNIPLA
VLMTFVSIPPTTLFVFLPGAIWVGNRFGYHADFSTVSDLVTRGASVGDWLAWLGSDAAPSLIIGLLLISLAAAAIGYFIS
AIGWRWWTGHKRKARQMRAAARDFPD

Sequences:

>Translated_186_residues
MFDRIVNWARANMPTREQMEQNRFARPLAARHELWRFTRRSVPRGVAAGLFIGIFALIPGVQIVGAALMCVPVRGNIPLA
VLMTFVSIPPTTLFVFLPGAIWVGNRFGYHADFSTVSDLVTRGASVGDWLAWLGSDAAPSLIIGLLLISLAAAAIGYFIS
AIGWRWWTGHKRKARQMRAAARDFPD
>Mature_186_residues
MFDRIVNWARANMPTREQMEQNRFARPLAARHELWRFTRRSVPRGVAAGLFIGIFALIPGVQIVGAALMCVPVRGNIPLA
VLMTFVSIPPTTLFVFLPGAIWVGNRFGYHADFSTVSDLVTRGASVGDWLAWLGSDAAPSLIIGLLLISLAAAAIGYFIS
AIGWRWWTGHKRKARQMRAAARDFPD

Specific function: Unknown

COG id: COG3216

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20563; Mature: 20563

Theoretical pI: Translated: 11.98; Mature: 11.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDRIVNWARANMPTREQMEQNRFARPLAARHELWRFTRRSVPRGVAAGLFIGIFALIPG
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
VQIVGAALMCVPVRGNIPLAVLMTFVSIPPTTLFVFLPGAIWVGNRFGYHADFSTVSDLV
HHHHHHHHHEEECCCCCHHHHHHHHHHCCHHHHHHHHCCHHEECCCCCCCCCHHHHHHHH
TRGASVGDWLAWLGSDAAPSLIIGLLLISLAAAAIGYFISAIGWRWWTGHKRKARQMRAA
HCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ARDFPD
HHCCCC
>Mature Secondary Structure
MFDRIVNWARANMPTREQMEQNRFARPLAARHELWRFTRRSVPRGVAAGLFIGIFALIPG
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
VQIVGAALMCVPVRGNIPLAVLMTFVSIPPTTLFVFLPGAIWVGNRFGYHADFSTVSDLV
HHHHHHHHHEEECCCCCHHHHHHHHHHCCHHHHHHHHCCHHEECCCCCCCCCHHHHHHHH
TRGASVGDWLAWLGSDAAPSLIIGLLLISLAAAAIGYFISAIGWRWWTGHKRKARQMRAA
HCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ARDFPD
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA