| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199460
Identifier: 87199460
GI number: 87199460
Start: 1484036
End: 1484230
Strand: Reverse
Name: 87199460
Synonym: Saro_1439
Alternate gene names: NA
Gene position: 1484230-1484036 (Counterclockwise)
Preceding gene: 87199461
Following gene: 87199459
Centisome position: 41.67
GC content: 62.05
Gene sequence:
>195_bases ATGGGCGATATCGTCAACCTCCGTTCGGCAAGGAAAGCCAAGGCGCGCGAGCTTCGAGAGGTCGAAGCCCAAGAGAACCG CGCGAAGTTCGGACGCACGAAAGGCGAGAAGGCCGGTTGCCGTAAGGAAGCCGAACGGGCGACCAGACTTCTCGATGGGG CCTTCATGGAGCGAACCGGGCGCAACGAGCCTTGA
Upstream 100 bases:
>100_bases CACCGATCGCTCCATCGCTCGTGCAGGGCTCGATCGCACTGGTCGAGAACGGCAACGAACGCGTGCTGTACGGATCCGAA CGTGGGATCGAGCACGCCTG
Downstream 100 bases:
>100_bases AGCGGCTCCTTGCTCTGGCGGCGGCAAGCCTAGCGGGGTTGGGAACCGGGACAGCGCTGGCGCGCGACAGCCTTGGCGTG TTCGGCACCTGGGGCGCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 63
Protein sequence:
>64_residues MGDIVNLRSARKAKARELREVEAQENRAKFGRTKGEKAGCRKEAERATRLLDGAFMERTGRNEP
Sequences:
>Translated_64_residues MGDIVNLRSARKAKARELREVEAQENRAKFGRTKGEKAGCRKEAERATRLLDGAFMERTGRNEP >Mature_63_residues GDIVNLRSARKAKARELREVEAQENRAKFGRTKGEKAGCRKEAERATRLLDGAFMERTGRNEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7261; Mature: 7130
Theoretical pI: Translated: 11.00; Mature: 11.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDIVNLRSARKAKARELREVEAQENRAKFGRTKGEKAGCRKEAERATRLLDGAFMERTG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC RNEP CCCC >Mature Secondary Structure GDIVNLRSARKAKARELREVEAQENRAKFGRTKGEKAGCRKEAERATRLLDGAFMERTG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC RNEP CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA