Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is 87199459

Identifier: 87199459

GI number: 87199459

Start: 1483542

End: 1484039

Strand: Reverse

Name: 87199459

Synonym: Saro_1438

Alternate gene names: NA

Gene position: 1484039-1483542 (Counterclockwise)

Preceding gene: 87199460

Following gene: 87199457

Centisome position: 41.67

GC content: 66.27

Gene sequence:

>498_bases
TTGAAGCGGCTCCTTGCTCTGGCGGCGGCAAGCCTAGCGGGGTTGGGAACCGGGACAGCGCTGGCGCGCGACAGCCTTGG
CGTGTTCGGCACCTGGGGCGCTTTCCGCGATCCCGGCGTTCCGCGCTGCTATGCCATCGCCATGGCCGACAAGATCGTAG
GCAGGAAACAAGAGTTCCAGCCGTACTTCACTGTGGGCTATTGGCCCGCCCGGAACATTCGCGCAGCCGTTCACGTAAGG
CTCGGGCGCCGGCTCTCGCCCGGTTCGAAAGTGATTGTTTCGTTTCCCGAGGCCAACTTCGCGCTGACCACTGGACAGGC
CGACGCCTGGCCGGTCGACCAGACTGCCAACGCAGGGATTCTTGCCCAGATGCGCAGCGCGCGCACGATGATCGTGATAG
CCAGGGGAGCGGATGGGCGGACGTTCCGCGACAGCTACCGGCTTGGAGGGGCGGCCTCGGCGATGGACGCGGCAGCGTTG
GGCTGCGCAAACCGGTAG

Upstream 100 bases:

>100_bases
GACGCACGAAAGGCGAGAAGGCCGGTTGCCGTAAGGAAGCCGAACGGGCGACCAGACTTCTCGATGGGGCCTTCATGGAG
CGAACCGGGCGCAACGAGCC

Downstream 100 bases:

>100_bases
CCTCGCCAATGCGAAAAGGGCGAGCCGCGAGGCCCGCCCTTCCCGTTTGCTGCGACCCGAACTGCGTCAGAAGCGGACGC
CAACGCCGGCGGTGATCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MKRLLALAAASLAGLGTGTALARDSLGVFGTWGAFRDPGVPRCYAIAMADKIVGRKQEFQPYFTVGYWPARNIRAAVHVR
LGRRLSPGSKVIVSFPEANFALTTGQADAWPVDQTANAGILAQMRSARTMIVIARGADGRTFRDSYRLGGAASAMDAAAL
GCANR

Sequences:

>Translated_165_residues
MKRLLALAAASLAGLGTGTALARDSLGVFGTWGAFRDPGVPRCYAIAMADKIVGRKQEFQPYFTVGYWPARNIRAAVHVR
LGRRLSPGSKVIVSFPEANFALTTGQADAWPVDQTANAGILAQMRSARTMIVIARGADGRTFRDSYRLGGAASAMDAAAL
GCANR
>Mature_165_residues
MKRLLALAAASLAGLGTGTALARDSLGVFGTWGAFRDPGVPRCYAIAMADKIVGRKQEFQPYFTVGYWPARNIRAAVHVR
LGRRLSPGSKVIVSFPEANFALTTGQADAWPVDQTANAGILAQMRSARTMIVIARGADGRTFRDSYRLGGAASAMDAAAL
GCANR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17474; Mature: 17474

Theoretical pI: Translated: 11.34; Mature: 11.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLLALAAASLAGLGTGTALARDSLGVFGTWGAFRDPGVPRCYAIAMADKIVGRKQEFQ
CHHHHHHHHHHHHCCCCCCHHHHCCCCCEECCCCCCCCCCCCEEHHHHHHHHHCCCCCCC
PYFTVGYWPARNIRAAVHVRLGRRLSPGSKVIVSFPEANFALTTGQADAWPVDQTANAGI
CEEEEEECCCCCCEEEEEEEECCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCH
LAQMRSARTMIVIARGADGRTFRDSYRLGGAASAMDAAALGCANR
HHHHCCCCEEEEEEECCCCCEECCHHCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MKRLLALAAASLAGLGTGTALARDSLGVFGTWGAFRDPGVPRCYAIAMADKIVGRKQEFQ
CHHHHHHHHHHHHCCCCCCHHHHCCCCCEECCCCCCCCCCCCEEHHHHHHHHHCCCCCCC
PYFTVGYWPARNIRAAVHVRLGRRLSPGSKVIVSFPEANFALTTGQADAWPVDQTANAGI
CEEEEEECCCCCCEEEEEEEECCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCH
LAQMRSARTMIVIARGADGRTFRDSYRLGGAASAMDAAALGCANR
HHHHCCCCEEEEEEECCCCCEECCHHCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA