| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199459
Identifier: 87199459
GI number: 87199459
Start: 1483542
End: 1484039
Strand: Reverse
Name: 87199459
Synonym: Saro_1438
Alternate gene names: NA
Gene position: 1484039-1483542 (Counterclockwise)
Preceding gene: 87199460
Following gene: 87199457
Centisome position: 41.67
GC content: 66.27
Gene sequence:
>498_bases TTGAAGCGGCTCCTTGCTCTGGCGGCGGCAAGCCTAGCGGGGTTGGGAACCGGGACAGCGCTGGCGCGCGACAGCCTTGG CGTGTTCGGCACCTGGGGCGCTTTCCGCGATCCCGGCGTTCCGCGCTGCTATGCCATCGCCATGGCCGACAAGATCGTAG GCAGGAAACAAGAGTTCCAGCCGTACTTCACTGTGGGCTATTGGCCCGCCCGGAACATTCGCGCAGCCGTTCACGTAAGG CTCGGGCGCCGGCTCTCGCCCGGTTCGAAAGTGATTGTTTCGTTTCCCGAGGCCAACTTCGCGCTGACCACTGGACAGGC CGACGCCTGGCCGGTCGACCAGACTGCCAACGCAGGGATTCTTGCCCAGATGCGCAGCGCGCGCACGATGATCGTGATAG CCAGGGGAGCGGATGGGCGGACGTTCCGCGACAGCTACCGGCTTGGAGGGGCGGCCTCGGCGATGGACGCGGCAGCGTTG GGCTGCGCAAACCGGTAG
Upstream 100 bases:
>100_bases GACGCACGAAAGGCGAGAAGGCCGGTTGCCGTAAGGAAGCCGAACGGGCGACCAGACTTCTCGATGGGGCCTTCATGGAG CGAACCGGGCGCAACGAGCC
Downstream 100 bases:
>100_bases CCTCGCCAATGCGAAAAGGGCGAGCCGCGAGGCCCGCCCTTCCCGTTTGCTGCGACCCGAACTGCGTCAGAAGCGGACGC CAACGCCGGCGGTGATCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MKRLLALAAASLAGLGTGTALARDSLGVFGTWGAFRDPGVPRCYAIAMADKIVGRKQEFQPYFTVGYWPARNIRAAVHVR LGRRLSPGSKVIVSFPEANFALTTGQADAWPVDQTANAGILAQMRSARTMIVIARGADGRTFRDSYRLGGAASAMDAAAL GCANR
Sequences:
>Translated_165_residues MKRLLALAAASLAGLGTGTALARDSLGVFGTWGAFRDPGVPRCYAIAMADKIVGRKQEFQPYFTVGYWPARNIRAAVHVR LGRRLSPGSKVIVSFPEANFALTTGQADAWPVDQTANAGILAQMRSARTMIVIARGADGRTFRDSYRLGGAASAMDAAAL GCANR >Mature_165_residues MKRLLALAAASLAGLGTGTALARDSLGVFGTWGAFRDPGVPRCYAIAMADKIVGRKQEFQPYFTVGYWPARNIRAAVHVR LGRRLSPGSKVIVSFPEANFALTTGQADAWPVDQTANAGILAQMRSARTMIVIARGADGRTFRDSYRLGGAASAMDAAAL GCANR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17474; Mature: 17474
Theoretical pI: Translated: 11.34; Mature: 11.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLLALAAASLAGLGTGTALARDSLGVFGTWGAFRDPGVPRCYAIAMADKIVGRKQEFQ CHHHHHHHHHHHHCCCCCCHHHHCCCCCEECCCCCCCCCCCCEEHHHHHHHHHCCCCCCC PYFTVGYWPARNIRAAVHVRLGRRLSPGSKVIVSFPEANFALTTGQADAWPVDQTANAGI CEEEEEECCCCCCEEEEEEEECCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCH LAQMRSARTMIVIARGADGRTFRDSYRLGGAASAMDAAALGCANR HHHHCCCCEEEEEEECCCCCEECCHHCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure MKRLLALAAASLAGLGTGTALARDSLGVFGTWGAFRDPGVPRCYAIAMADKIVGRKQEFQ CHHHHHHHHHHHHCCCCCCHHHHCCCCCEECCCCCCCCCCCCEEHHHHHHHHHCCCCCCC PYFTVGYWPARNIRAAVHVRLGRRLSPGSKVIVSFPEANFALTTGQADAWPVDQTANAGI CEEEEEECCCCCCEEEEEEEECCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCH LAQMRSARTMIVIARGADGRTFRDSYRLGGAASAMDAAALGCANR HHHHCCCCEEEEEEECCCCCEECCHHCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA