| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199458
Identifier: 87199458
GI number: 87199458
Start: 1482804
End: 1483475
Strand: Direct
Name: 87199458
Synonym: Saro_1437
Alternate gene names: NA
Gene position: 1482804-1483475 (Clockwise)
Preceding gene: 87199456
Following gene: 87199464
Centisome position: 41.63
GC content: 62.05
Gene sequence:
>672_bases ATGAAAAAGATCTGCGCAATCCTCGCCGCCGGCACTGCCATCGCTGCTGCTCCTGCGTACGCGCAGGACGCCACGCCCGC CGAAGCCTTCAGCGGTTTCCACGCCGAAGCTCTCGTGGGCTATGACCACAACCGCTCCGGCAGCAGCGAAGATGTCGACA ACACCCGCGATCTCAAGCAGTCCATCGACGGCGTCGAATACGGCGGCGCGATCGGCTATGACATTCCGCTTGGCACCAAT CTTGTCGCCGGTGCCGAAGCTGAAATCACCGACAGCAGCGCGAGCTGGGACAACAACAACGACCAGCCCAACGTCTTCAA CCTCGGTCGCGTCGAAGCGGGCCGCCAGTACTACGTCGGCGCCCGTCTCGGTTATGCAATGTCGCCGAGCACGATGGTCT ATGTGAAGGGTGGCTACAGCAACGCCCGCTATAACCTTCAGGGCACCGACGGAACCACTAACCTGCGCCAGCGGCTTGAC GCCGACGGCTACCGCGTGGGTGCCGGCGTCGAGCAGAAGGTTGGCGAGAACGCCTTTGTGAAGCTCGAGTACAAGTACGC AAACTACAGCAAGGGCGAATTCGACTTCAACGGCGACACGCCGGACAGCAGCCGCTTCAACCTCGACACCGACCGTCATT CGATCACCGCCGGCGTTGGCGTCCGCTTCTGA
Upstream 100 bases:
>100_bases TGAGGTTAATGAAACTGGATCGTCCCCCGGACATTCGGACAACCACTGTCGGGTCGCATCTAGCCAAGGACCGGCAGGCA CGTTCGAATGGAGTGAAAAC
Downstream 100 bases:
>100_bases CGCAGTTCGGGTCGCAGCAAACGGGAAGGGCGGGCCTCGCGGCTCGCCCTTTTCGCATTGGCGAGGCTACCGGTTTGCGC AGCCCAACGCTGCCGCGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: Outer Membrane Protein-Like; Opacity Protein And Related Surface Antigens-Like Protein
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MKKICAILAAGTAIAAAPAYAQDATPAEAFSGFHAEALVGYDHNRSGSSEDVDNTRDLKQSIDGVEYGGAIGYDIPLGTN LVAGAEAEITDSSASWDNNNDQPNVFNLGRVEAGRQYYVGARLGYAMSPSTMVYVKGGYSNARYNLQGTDGTTNLRQRLD ADGYRVGAGVEQKVGENAFVKLEYKYANYSKGEFDFNGDTPDSSRFNLDTDRHSITAGVGVRF
Sequences:
>Translated_223_residues MKKICAILAAGTAIAAAPAYAQDATPAEAFSGFHAEALVGYDHNRSGSSEDVDNTRDLKQSIDGVEYGGAIGYDIPLGTN LVAGAEAEITDSSASWDNNNDQPNVFNLGRVEAGRQYYVGARLGYAMSPSTMVYVKGGYSNARYNLQGTDGTTNLRQRLD ADGYRVGAGVEQKVGENAFVKLEYKYANYSKGEFDFNGDTPDSSRFNLDTDRHSITAGVGVRF >Mature_223_residues MKKICAILAAGTAIAAAPAYAQDATPAEAFSGFHAEALVGYDHNRSGSSEDVDNTRDLKQSIDGVEYGGAIGYDIPLGTN LVAGAEAEITDSSASWDNNNDQPNVFNLGRVEAGRQYYVGARLGYAMSPSTMVYVKGGYSNARYNLQGTDGTTNLRQRLD ADGYRVGAGVEQKVGENAFVKLEYKYANYSKGEFDFNGDTPDSSRFNLDTDRHSITAGVGVRF
Specific function: Unknown
COG id: COG3637
COG function: function code M; Opacity protein and related surface antigens
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23900; Mature: 23900
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKICAILAAGTAIAAAPAYAQDATPAEAFSGFHAEALVGYDHNRSGSSEDVDNTRDLKQ CCHHHEEHHCCCHHHCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHH SIDGVEYGGAIGYDIPLGTNLVAGAEAEITDSSASWDNNNDQPNVFNLGRVEAGRQYYVG HCCCCCCCCEEEECCCCCCCEECCCCCEECCCCCCCCCCCCCCCEEECCCCCCCCEEEEE ARLGYAMSPSTMVYVKGGYSNARYNLQGTDGTTNLRQRLDADGYRVGAGVEQKVGENAFV EEECCEECCCEEEEEECCCCCCEEEEECCCCHHHHHHHCCCCCEEECCCCHHHCCCCEEE KLEYKYANYSKGEFDFNGDTPDSSRFNLDTDRHSITAGVGVRF EEEEEECCCCCCEEECCCCCCCCCEEECCCCCCEEEECCEECC >Mature Secondary Structure MKKICAILAAGTAIAAAPAYAQDATPAEAFSGFHAEALVGYDHNRSGSSEDVDNTRDLKQ CCHHHEEHHCCCHHHCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHH SIDGVEYGGAIGYDIPLGTNLVAGAEAEITDSSASWDNNNDQPNVFNLGRVEAGRQYYVG HCCCCCCCCEEEECCCCCCCEECCCCCEECCCCCCCCCCCCCCCEEECCCCCCCCEEEEE ARLGYAMSPSTMVYVKGGYSNARYNLQGTDGTTNLRQRLDADGYRVGAGVEQKVGENAFV EEECCEECCCEEEEEECCCCCCEEEEECCCCHHHHHHHCCCCCEEECCCCHHHCCCCEEE KLEYKYANYSKGEFDFNGDTPDSSRFNLDTDRHSITAGVGVRF EEEEEECCCCCCEEECCCCCCCCCEEECCCCCCEEEECCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA