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The map label for this gene is ftsY [H]

Identifier: 87199421

GI number: 87199421

Start: 1442564

End: 1443490

Strand: Reverse

Name: ftsY [H]

Synonym: Saro_1400

Alternate gene names: 87199421

Gene position: 1443490-1442564 (Counterclockwise)

Preceding gene: 87199422

Following gene: 87199420

Centisome position: 40.53

GC content: 67.1

Gene sequence:

>927_bases
ATGAGTGGCGAAAGCTGGTCCGATAGAATCCTCGGGGGCTTCCGCAAGACGTCAGAGCGGCTCGCCGAAAACCTTGGCGG
CATCGTCGGCAGCAGCCGACTGACCGAAGCGCAGCTTGACGATCTCGAGGACGCGCTGATCCTCTCCGACCTCGGCCCCC
GCGCCGCCGCGCGCATCCGCGAGCGGCTGAAAGGCGCGCGATTCGAGAACGGGGTGGACGAGCAGGGCCTGAAGGAAGCC
GTCGCCGAGGAAATCGCCGCGATCCTGCGCCCCGTGGCCAAGCCGCTGGAAATCGTAGCCTTTCCGCGTCCGCAGGTGAT
CCTTGTGATCGGCGTCAACGGTTCGGGCAAGACGACGACCATCGCCAAGCTTGCCCATCTGTTCCAGGAACAGGACTACG
GCGTGATGCTGGCGGCAGGCGACACCTTCCGCGCAGCTGCCATCGGGCAGCTCAAGGTCTGGGCCGACCGGCTCGGCGTT
CCGATCGTGACCGGGCCGGAAGGCGGCGATCCCGCCTCCATCGTGTTCGACGCGGTCAAGGCAGCGACCGACACGGGCAT
CGACACGCTGATCGTGGACACCGCCGGGCGCCTGCAGAACAAGCGCGAGCTGATGGACGAGCTGGCCAAGGTCCGCCGCG
TCCTCGGCCGCCTGAACCCGGCCGCGCCGCATGACGTGGTGCTGGTGCTCGACGCGACCAACGGGCAGAATGCCTTGCAG
CAGATCGAGATCTTCAAGGAGGTTGCGGGCGTGACCGGGCTGATCATGACCAAGCTCGACGGTACTGCACGCGGCGGCGT
GCTGGTTGCCGCCGCCGAGCAGTACGGCCTGCCCATCCACGCCATTGGCGTCGGCGAGAAGATCGACGACCTGCGCCCCT
TCGACCCCGACCTTGTCGCCAAGGTCATCGCGGGAGTGTTCCGGTGA

Upstream 100 bases:

>100_bases
GCCATGCGGGCCACTTTGCGACCTATCGCGTAACGGACGGCGTGACTGCGGGCAGCCTCGTCATGGTGACGCCGACCAAG
ATTGTTGAAGGAATACTGGA

Downstream 100 bases:

>100_bases
GCGAAGCGCAGAAAAAGCCAAAGTCCTCGTGGGTAAACCTGGCGGTCGACTACGGCCCGCTGCTCGTCTTCTTCCTCGCC
TATCGATACTTCAAGCGGGA

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MSGESWSDRILGGFRKTSERLAENLGGIVGSSRLTEAQLDDLEDALILSDLGPRAAARIRERLKGARFENGVDEQGLKEA
VAEEIAAILRPVAKPLEIVAFPRPQVILVIGVNGSGKTTTIAKLAHLFQEQDYGVMLAAGDTFRAAAIGQLKVWADRLGV
PIVTGPEGGDPASIVFDAVKAATDTGIDTLIVDTAGRLQNKRELMDELAKVRRVLGRLNPAAPHDVVLVLDATNGQNALQ
QIEIFKEVAGVTGLIMTKLDGTARGGVLVAAAEQYGLPIHAIGVGEKIDDLRPFDPDLVAKVIAGVFR

Sequences:

>Translated_308_residues
MSGESWSDRILGGFRKTSERLAENLGGIVGSSRLTEAQLDDLEDALILSDLGPRAAARIRERLKGARFENGVDEQGLKEA
VAEEIAAILRPVAKPLEIVAFPRPQVILVIGVNGSGKTTTIAKLAHLFQEQDYGVMLAAGDTFRAAAIGQLKVWADRLGV
PIVTGPEGGDPASIVFDAVKAATDTGIDTLIVDTAGRLQNKRELMDELAKVRRVLGRLNPAAPHDVVLVLDATNGQNALQ
QIEIFKEVAGVTGLIMTKLDGTARGGVLVAAAEQYGLPIHAIGVGEKIDDLRPFDPDLVAKVIAGVFR
>Mature_307_residues
SGESWSDRILGGFRKTSERLAENLGGIVGSSRLTEAQLDDLEDALILSDLGPRAAARIRERLKGARFENGVDEQGLKEAV
AEEIAAILRPVAKPLEIVAFPRPQVILVIGVNGSGKTTTIAKLAHLFQEQDYGVMLAAGDTFRAAAIGQLKVWADRLGVP
IVTGPEGGDPASIVFDAVKAATDTGIDTLIVDTAGRLQNKRELMDELAKVRRVLGRLNPAAPHDVVLVLDATNGQNALQQ
IEIFKEVAGVTGLIMTKLDGTARGGVLVAAAEQYGLPIHAIGVGEKIDDLRPFDPDLVAKVIAGVFR

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=285, Percent_Identity=31.5789473684211, Blast_Score=139, Evalue=3e-33,
Organism=Homo sapiens, GI226371618, Length=218, Percent_Identity=35.3211009174312, Blast_Score=130, Evalue=1e-30,
Organism=Homo sapiens, GI23308697, Length=315, Percent_Identity=28.8888888888889, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI295424842, Length=315, Percent_Identity=28.8888888888889, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI89061728, Length=125, Percent_Identity=36.8, Blast_Score=79, Evalue=4e-15,
Organism=Escherichia coli, GI1789874, Length=297, Percent_Identity=45.7912457912458, Blast_Score=246, Evalue=1e-66,
Organism=Escherichia coli, GI1788963, Length=303, Percent_Identity=33.993399339934, Blast_Score=147, Evalue=6e-37,
Organism=Caenorhabditis elegans, GI17539958, Length=296, Percent_Identity=31.0810810810811, Blast_Score=138, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI193206261, Length=304, Percent_Identity=31.9078947368421, Blast_Score=110, Evalue=1e-24,
Organism=Saccharomyces cerevisiae, GI6325345, Length=202, Percent_Identity=36.6336633663366, Blast_Score=134, Evalue=2e-32,
Organism=Saccharomyces cerevisiae, GI6320498, Length=315, Percent_Identity=26.3492063492064, Blast_Score=92, Evalue=1e-19,
Organism=Drosophila melanogaster, GI17647949, Length=263, Percent_Identity=32.6996197718631, Blast_Score=142, Evalue=4e-34,
Organism=Drosophila melanogaster, GI24641198, Length=320, Percent_Identity=28.75, Blast_Score=111, Evalue=7e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 32705; Mature: 32574

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGESWSDRILGGFRKTSERLAENLGGIVGSSRLTEAQLDDLEDALILSDLGPRAAARIR
CCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH
ERLKGARFENGVDEQGLKEAVAEEIAAILRPVAKPLEIVAFPRPQVILVIGVNGSGKTTT
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCCHHH
IAKLAHLFQEQDYGVMLAAGDTFRAAAIGQLKVWADRLGVPIVTGPEGGDPASIVFDAVK
HHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHH
AATDTGIDTLIVDTAGRLQNKRELMDELAKVRRVLGRLNPAAPHDVVLVLDATNGQNALQ
HHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHH
QIEIFKEVAGVTGLIMTKLDGTARGGVLVAAAEQYGLPIHAIGVGEKIDDLRPFDPDLVA
HHHHHHHHHHHHHHHHEECCCCCCCCEEEEEHHHHCCCEEEECCCCCHHCCCCCCHHHHH
KVIAGVFR
HHHHHHCC
>Mature Secondary Structure 
SGESWSDRILGGFRKTSERLAENLGGIVGSSRLTEAQLDDLEDALILSDLGPRAAARIR
CCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH
ERLKGARFENGVDEQGLKEAVAEEIAAILRPVAKPLEIVAFPRPQVILVIGVNGSGKTTT
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCCHHH
IAKLAHLFQEQDYGVMLAAGDTFRAAAIGQLKVWADRLGVPIVTGPEGGDPASIVFDAVK
HHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHH
AATDTGIDTLIVDTAGRLQNKRELMDELAKVRRVLGRLNPAAPHDVVLVLDATNGQNALQ
HHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHH
QIEIFKEVAGVTGLIMTKLDGTARGGVLVAAAEQYGLPIHAIGVGEKIDDLRPFDPDLVA
HHHHHHHHHHHHHHHHEECCCCCCCCEEEEEHHHHCCCEEEECCCCCHHCCCCCCHHHHH
KVIAGVFR
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]