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The map label for this gene is tsf

Identifier: 87199391

GI number: 87199391

Start: 1417409

End: 1418335

Strand: Direct

Name: tsf

Synonym: Saro_1370

Alternate gene names: 87199391

Gene position: 1417409-1418335 (Clockwise)

Preceding gene: 87199390

Following gene: 87199392

Centisome position: 39.8

GC content: 64.62

Gene sequence:

>927_bases
ATGGCCTACACCGCCGCTGACGTGAAGAACCTGCGCGAGCGCACTGGCGCCGGCATGATGGACTGCAAGAAGGCCCTCGA
CGAAAGCGGTGGCGATTTCGAAGCCGCCGTTGACGCGCTGCGCGCCAAGGGTCTTGCCGCCGCCGCCAAGAAGTCGAGCC
GCACCGCCGCCGAGGGCCTCGTCGGCGTCGCCGTCTCGGGCACCAAGGGCGTCGCGCTCGAAGTGAACTCGGAAACCGAC
TTCGTTGCCAAGAACGACCAGTTCCAGGATTTCGTGCGCAAGGCGACCGAAGTTGCGCTGAACACCGCTGCCGCCGATGT
CGAGGCACTGAAGGCTGCCGCCTATCCGGACGGCGGCACGGTTGCCGACAAGCTGACCAACAACGTCGCCACCATCGGCG
AAAACCAGCAGCTGCGTCGCATCAAGCACGTCGCCGTCTCGAACGGTATCGTGGTGCCCTACATGCACAACGCCGCCGCC
ACCAACCTCGGCAAGATCGGCGTGCTCGTCGCGCTCGAATCGGAAGCCGCGGCTGACAAGCTCGAGGCGCTCGGCAAGCA
GATCGCGATGCACATCGCTGCTGCCTTCCCGCTGGCGCTGACCGCGGACGACCTCGACGCCGAACTGATCGCCCGCGAGC
GCAAGATCGCGGCCGAGAAGGCGGCAGAGAGCGGCAAGCCTGCCGAAGTCCAGGCGAAGATGGTTGACGGCGCCGTCGCC
AAGTACGCCAAGGAAAACGCGCTGCTTTCGCAGATCTTCGTGATGGACAACAAGTCGACCATTCAGCAGGTCGTCGACGC
CGCCGGCAAGGAAGCCGGTGCGAAGATCGTACTCAAGGACTATGTCCGCTTCCAGCTCGGTGAAGGCATCGAGAAGGAAG
AGACCGACTTCGCTGCCGAAGTGGCTGCTGCCGCCGGCATCAAGTAA

Upstream 100 bases:

>100_bases
GTCAAAAGGGCAGGGCCGTCACCGAATTGTCCCGGATGCGATTTACGGGCCGCGGCAATGCTGCGGCCTTCCCCGTTTTC
AAGAATAAAGGATCAACGCA

Downstream 100 bases:

>100_bases
GTCTGAAATCAACGATCCCCGCACGGGCGGGCTGGCGCTGCGCCGGCCCGTCGGTGCGGGGATAGTTACGTCTGCGCCCT
TGGCACCGCCCCTTACAGGG

Product: elongation factor Ts

Products: NA

Alternate protein names: EF-Ts

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MAYTAADVKNLRERTGAGMMDCKKALDESGGDFEAAVDALRAKGLAAAAKKSSRTAAEGLVGVAVSGTKGVALEVNSETD
FVAKNDQFQDFVRKATEVALNTAAADVEALKAAAYPDGGTVADKLTNNVATIGENQQLRRIKHVAVSNGIVVPYMHNAAA
TNLGKIGVLVALESEAAADKLEALGKQIAMHIAAAFPLALTADDLDAELIARERKIAAEKAAESGKPAEVQAKMVDGAVA
KYAKENALLSQIFVMDNKSTIQQVVDAAGKEAGAKIVLKDYVRFQLGEGIEKEETDFAAEVAAAAGIK

Sequences:

>Translated_308_residues
MAYTAADVKNLRERTGAGMMDCKKALDESGGDFEAAVDALRAKGLAAAAKKSSRTAAEGLVGVAVSGTKGVALEVNSETD
FVAKNDQFQDFVRKATEVALNTAAADVEALKAAAYPDGGTVADKLTNNVATIGENQQLRRIKHVAVSNGIVVPYMHNAAA
TNLGKIGVLVALESEAAADKLEALGKQIAMHIAAAFPLALTADDLDAELIARERKIAAEKAAESGKPAEVQAKMVDGAVA
KYAKENALLSQIFVMDNKSTIQQVVDAAGKEAGAKIVLKDYVRFQLGEGIEKEETDFAAEVAAAAGIK
>Mature_307_residues
AYTAADVKNLRERTGAGMMDCKKALDESGGDFEAAVDALRAKGLAAAAKKSSRTAAEGLVGVAVSGTKGVALEVNSETDF
VAKNDQFQDFVRKATEVALNTAAADVEALKAAAYPDGGTVADKLTNNVATIGENQQLRRIKHVAVSNGIVVPYMHNAAAT
NLGKIGVLVALESEAAADKLEALGKQIAMHIAAAFPLALTADDLDAELIARERKIAAEKAAESGKPAEVQAKMVDGAVAK
YAKENALLSQIFVMDNKSTIQQVVDAAGKEAGAKIVLKDYVRFQLGEGIEKEETDFAAEVAAAAGIK

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family

Homologues:

Organism=Homo sapiens, GI171846268, Length=305, Percent_Identity=30.1639344262295, Blast_Score=111, Evalue=7e-25,
Organism=Homo sapiens, GI291084500, Length=325, Percent_Identity=28.3076923076923, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI291084502, Length=114, Percent_Identity=40.3508771929825, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI291084498, Length=96, Percent_Identity=42.7083333333333, Blast_Score=74, Evalue=2e-13,
Organism=Escherichia coli, GI1786366, Length=300, Percent_Identity=43.6666666666667, Blast_Score=209, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI17561440, Length=298, Percent_Identity=25.8389261744966, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI19921466, Length=307, Percent_Identity=28.6644951140065, Blast_Score=103, Evalue=2e-22,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): EFTS_NOVAD (Q2G8K9)

Other databases:

- EMBL:   CP000248
- RefSeq:   YP_496648.1
- ProteinModelPortal:   Q2G8K9
- SMR:   Q2G8K9
- STRING:   Q2G8K9
- GeneID:   3917824
- GenomeReviews:   CP000248_GR
- KEGG:   nar:Saro_1370
- NMPDR:   fig|48935.1.peg.1227
- eggNOG:   COG0264
- HOGENOM:   HBG713289
- OMA:   YLHGTRI
- PhylomeDB:   Q2G8K9
- ProtClustDB:   PRK09377
- BioCyc:   NARO279238:SARO_1370-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00050
- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449
- Gene3D:   G3DSA:3.30.479.20
- PANTHER:   PTHR11741
- TIGRFAMs:   TIGR00116

Pfam domain/function: PF00889 EF_TS; PF00627 UBA; SSF54713 EF_TS; SSF46934 UBA_like

EC number: NA

Molecular weight: Translated: 32046; Mature: 31914

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS01126 EF_TS_1; PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYTAADVKNLRERTGAGMMDCKKALDESGGDFEAAVDALRAKGLAAAAKKSSRTAAEGL
CCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCC
VGVAVSGTKGVALEVNSETDFVAKNDQFQDFVRKATEVALNTAAADVEALKAAAYPDGGT
EEEEEECCCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
VADKLTNNVATIGENQQLRRIKHVAVSNGIVVPYMHNAAATNLGKIGVLVALESEAAADK
HHHHHHCCHHCCCCCHHHHHHHHHHHCCCEEEEEECCHHHCCCCCEEEEEEECCHHHHHH
LEALGKQIAMHIAAAFPLALTADDLDAELIARERKIAAEKAAESGKPAEVQAKMVDGAVA
HHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
KYAKENALLSQIFVMDNKSTIQQVVDAAGKEAGAKIVLKDYVRFQLGEGIEKEETDFAAE
HHHHHHHHHHHHHEECCHHHHHHHHHHHCHHCCCEEHHHHHHHHHHCCCCCHHHHHHHHH
VAAAAGIK
HHHHCCCC
>Mature Secondary Structure 
AYTAADVKNLRERTGAGMMDCKKALDESGGDFEAAVDALRAKGLAAAAKKSSRTAAEGL
CCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCC
VGVAVSGTKGVALEVNSETDFVAKNDQFQDFVRKATEVALNTAAADVEALKAAAYPDGGT
EEEEEECCCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
VADKLTNNVATIGENQQLRRIKHVAVSNGIVVPYMHNAAATNLGKIGVLVALESEAAADK
HHHHHHCCHHCCCCCHHHHHHHHHHHCCCEEEEEECCHHHCCCCCEEEEEEECCHHHHHH
LEALGKQIAMHIAAAFPLALTADDLDAELIARERKIAAEKAAESGKPAEVQAKMVDGAVA
HHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
KYAKENALLSQIFVMDNKSTIQQVVDAAGKEAGAKIVLKDYVRFQLGEGIEKEETDFAAE
HHHHHHHHHHHHHEECCHHHHHHHHHHHCHHCCCEEHHHHHHHHHHCCCCCHHHHHHHHH
VAAAAGIK
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA