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The map label for this gene is psd

Identifier: 87199387

GI number: 87199387

Start: 1414307

End: 1415065

Strand: Direct

Name: psd

Synonym: Saro_1366

Alternate gene names: 87199387

Gene position: 1414307-1415065 (Clockwise)

Preceding gene: 87199386

Following gene: 87199388

Centisome position: 39.71

GC content: 65.22

Gene sequence:

>759_bases
ATGGGGCGAATGTCCGGAGAAATACTCGATAACCGCGGTCGCGGCACCGCCGGATGGTCATGGCCATCCATCCACCCCGA
AGGCCGCAAGTTCGGCCTCATTGCCGCAGTGGCCAGCCTTGGCGCGGCGCTCATGGCGTGGGAGACCATCGCCTGGCCAC
TGGCGTTCCTCACGCTGGGCGTGCTGGCGTTCTTCCGTGATCCGGTTCGCGTCACGCCGCGTGACGACCGCTTCGTGGTG
TCCCCTGCCGACGGCCTGATCACGTTGATCCAGAAGGTTCCGCCCCCGCGCGAACTTTGCGCCGATGACGGCAGCGGCGT
GCGCGGCATGAACGATGCGCCGGTAACGCGCGTTTCGATCTTCATGTCGGTGTTCGACGTTCATATCAATCGCTCGCCCA
TCGCCGGAACGATTCGTCGCGTGGTCTATATCCCGGGCAAGTTCCTCAACGCCGATCTCGACAAGGCGAGCGAGGAAAAC
GAGCGCCAGCACTTCCTGGTTGAGCGCGCGGACGGCGTGCAGATCGGCTTCACCCAGATCGCAGGGCTGATTGCCCGCCG
TATCGTGCCCTTCGTGAAGGGCGGCGACATCGTCGCGGTCGGCCAGCGCGTCGGCCTGATCCGCTTCGGCAGCCGGGTCG
ACGTCTATCTTCCGGCCGGAACGGAGCCGAAGGTGCTGATGGGGCAGAAGGTGATCGCGGGCGAGACGGTGCTTGCCGAA
ATCGGCGAGGCGCCGATGATCGAGGGTATCGGGCAGTGA

Upstream 100 bases:

>100_bases
GGCCGTCATCGAATTTCTGGAGCGGGTCATGCCCGCAACCGCGCCGAACCCCGCAGGATAGGCAGGATGTTTGCTTGTCG
CGGCGCGAGCCAGCGCCTAG

Downstream 100 bases:

>100_bases
TTGCCCAGGGCGAACCCGAGGGCCCGCGCCGGGGTCGCCTTCCCGGGGGACTCACGCTGCGCGCGATGGCACCCAACGCC
ATCACCACGGCGGCCCTCTG

Product: phosphatidylserine decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MGRMSGEILDNRGRGTAGWSWPSIHPEGRKFGLIAAVASLGAALMAWETIAWPLAFLTLGVLAFFRDPVRVTPRDDRFVV
SPADGLITLIQKVPPPRELCADDGSGVRGMNDAPVTRVSIFMSVFDVHINRSPIAGTIRRVVYIPGKFLNADLDKASEEN
ERQHFLVERADGVQIGFTQIAGLIARRIVPFVKGGDIVAVGQRVGLIRFGSRVDVYLPAGTEPKVLMGQKVIAGETVLAE
IGEAPMIEGIGQ

Sequences:

>Translated_252_residues
MGRMSGEILDNRGRGTAGWSWPSIHPEGRKFGLIAAVASLGAALMAWETIAWPLAFLTLGVLAFFRDPVRVTPRDDRFVV
SPADGLITLIQKVPPPRELCADDGSGVRGMNDAPVTRVSIFMSVFDVHINRSPIAGTIRRVVYIPGKFLNADLDKASEEN
ERQHFLVERADGVQIGFTQIAGLIARRIVPFVKGGDIVAVGQRVGLIRFGSRVDVYLPAGTEPKVLMGQKVIAGETVLAE
IGEAPMIEGIGQ
>Mature_251_residues
GRMSGEILDNRGRGTAGWSWPSIHPEGRKFGLIAAVASLGAALMAWETIAWPLAFLTLGVLAFFRDPVRVTPRDDRFVVS
PADGLITLIQKVPPPRELCADDGSGVRGMNDAPVTRVSIFMSVFDVHINRSPIAGTIRRVVYIPGKFLNADLDKASEENE
RQHFLVERADGVQIGFTQIAGLIARRIVPFVKGGDIVAVGQRVGLIRFGSRVDVYLPAGTEPKVLMGQKVIAGETVLAEI
GEAPMIEGIGQ

Specific function: Unknown

COG id: COG0688

COG function: function code I; Phosphatidylserine decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphatidylserine decarboxylase family. Type 3 subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSD_NOVAD (Q2G8L3)

Other databases:

- EMBL:   CP000248
- RefSeq:   YP_496644.1
- STRING:   Q2G8L3
- GeneID:   3917820
- GenomeReviews:   CP000248_GR
- KEGG:   nar:Saro_1366
- eggNOG:   COG0688
- HOGENOM:   HBG541103
- OMA:   IFMSVFN
- ProtClustDB:   PRK05305
- BioCyc:   NARO279238:SARO_1366-MONOMER
- HAMAP:   MF_00664
- InterPro:   IPR003817
- InterPro:   IPR004428
- TIGRFAMs:   TIGR00164

Pfam domain/function: PF02666 PS_Dcarbxylase

EC number: =4.1.1.65

Molecular weight: Translated: 27210; Mature: 27079

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRMSGEILDNRGRGTAGWSWPSIHPEGRKFGLIAAVASLGAALMAWETIAWPLAFLTLG
CCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLAFFRDPVRVTPRDDRFVVSPADGLITLIQKVPPPRELCADDGSGVRGMNDAPVTRVSI
HHHHHCCCCEECCCCCEEEECCCHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCHHHHHH
FMSVFDVHINRSPIAGTIRRVVYIPGKFLNADLDKASEENERQHFLVERADGVQIGFTQI
HHHHHHHHCCCCCHHHHHHEEEECCCHHCCCCHHHCCCCCCHHHEEEECCCCCEECHHHH
AGLIARRIVPFVKGGDIVAVGQRVGLIRFGSRVDVYLPAGTEPKVLMGQKVIAGETVLAE
HHHHHHHHHHHCCCCCEEEECCEECEEEECCEEEEEECCCCCCCEEECCEECCCCHHHHH
IGEAPMIEGIGQ
CCCCCCCCCCCC
>Mature Secondary Structure 
GRMSGEILDNRGRGTAGWSWPSIHPEGRKFGLIAAVASLGAALMAWETIAWPLAFLTLG
CCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLAFFRDPVRVTPRDDRFVVSPADGLITLIQKVPPPRELCADDGSGVRGMNDAPVTRVSI
HHHHHCCCCEECCCCCEEEECCCHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCHHHHHH
FMSVFDVHINRSPIAGTIRRVVYIPGKFLNADLDKASEENERQHFLVERADGVQIGFTQI
HHHHHHHHCCCCCHHHHHHEEEECCCHHCCCCHHHCCCCCCHHHEEEECCCCCEECHHHH
AGLIARRIVPFVKGGDIVAVGQRVGLIRFGSRVDVYLPAGTEPKVLMGQKVIAGETVLAE
HHHHHHHHHHHCCCCCEEEECCEECEEEECCEEEEEECCCCCCCEEECCEECCCCHHHHH
IGEAPMIEGIGQ
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA