| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is ygeD [C]
Identifier: 87199355
GI number: 87199355
Start: 1374764
End: 1376086
Strand: Reverse
Name: ygeD [C]
Synonym: Saro_1334
Alternate gene names: 87199355
Gene position: 1376086-1374764 (Counterclockwise)
Preceding gene: 87199357
Following gene: 87199351
Centisome position: 38.64
GC content: 62.59
Gene sequence:
>1323_bases ATGACAACATCGACGCATCTGGTGCGCACGCGCCGTTTCCTGCCGCTGTTCGTCACCCAGCTTCTGGGGGCCTTCAACGA CAATCTCTACAAGAACGCGATGGTCCTGTACGTCGTGTACAGCGTCTACAATTCCGAAGCTGCCGAAGCGCGCTTTTCGG CCATCGCCTCGGGCTTGTTCATCCTGCCGTTCTTCCTGCTTTCGGCACTTGCCGGGCAGCTTGCCGACATGCGCGACAAG GCGCGCATAATCCGCATCGTCAAGGCCTGCGAGATCGCGATCATGCTGGTCGGCGGCACGGGCCTGGTGCTCGCGTGGCT TGGCATGGAAGTCGAGGCGATCGCCATCCCGCTGATGCTCGCGGCACTTCTCGCAATGGGTGTCCACTCCACGTTCTTCG GGCCGATCAAGTACGCGATCCTGCCGCAACATCTCCATGAAGGCGAAGTGCTGGCCGGAACCGGTCTGGTCGAGGCGGGC ACCTACATCGCCATTCTTGCGGGCACGATCCTCGCGGGCTGGATTCCGGTGGAAGTGGCTGCGGCGGGTGTCGTGCTCAC CGCACTCGTCGGATATGTCTCGGGACGGCAGGTGCCGCCCGCGCCGCCGATGATCGATGCACAGAAGATCGACTACAACG TCCTGACCTCCTCCTATGACCTGATCCGCAACACCACGCGCCATCGCCAGGTGTTCATGGCGATCGTCGCGATCAGCTTC TTCTGGACGGTCGGCACAGTGCTGTTCATCCAGTTCCCGCCACTTGCCAAGAACGTGCTTTCCGCCAGCAAGGAAGTGGC CAGCCTGTTCCTCGTGATGTTCTCCATCGGCATCGCCGTCGGTTCGATGTCGATCAATGCCCTGCTCAAGGGGACCGTTT CGGCCCGCTTCGCTCCGGCATCGGTGATCGTCATGGGTCTGTTCATCACCGCCTTCCACTATGTCTGCAGGGCGTGGAAC GTGCATCCCGATGCACCGCTGATGGACGTCGCGGCCTTCATTGCCCAACCTCTGGCGGTGCCGCTGCTGCTGTGCCTGCT CGGCATCGCCATTGCCGGGGGCATGTTCGTCGTGCCGCTCTATGCCTTCCTGACGACGGTGGTCGACAAGTCCGAAACCG CCCGCACCATCGCGGCCAACAACATCGTCAACTCCGGCGCGATGGTCATCGGCTCGCTGATCGCGGGCGGACTGACCTGG ATCGGAGTGACGATCGTCGACCAGCTCATGCTGGGCGCGGCGATGTGCATCGTTTCGGCCTGGCTTGGCTGGCTGCTCTA CAAGGCGGAACGCGAAGTGCGGCAGTCCGGCGTCACGCGATGA
Upstream 100 bases:
>100_bases TCGCAACATTCACCGCCTACCGCTCCGACTGCAAAACCTCTTGCCCGCGTGCTTCACCGGGCTAAGGGTGCGGACGAGAA GAGATGCTGGCAAAGGGTTC
Downstream 100 bases:
>100_bases ACATCATCACCGCGAAGAAACAGGCGCAATAGGCCAGCAGGAACTCGCGCAGGTCGCGCGCGGTGATGCGCTTGAGATCG ACCGGATCGGATCGGACCTC
Product: major facilitator transporter
Products: CoA; 1,2-diacyl-sn-glycerol 3-phosphate
Alternate protein names: Acylglycerophosphoethanolamine Acyltransferase; Facilitator Transporter; 2-Acyl-Glycerophospho-Ethanolamine Acyltransferase; Acyltransferase Family Protein; AMP-Dependent Synthetase And Ligase; 1-Acyl-Sn-Glycerol-3-Phosphate Acyltransferase; Facilitator Superfamily Protein; 2-Acylglycerophosphoethanolamine Acyltransferase; Transporter Facilitator Family; Acyltransferase; Acyl-CoA Synthetase /AMP-Acid Ligase II; Long-Chain-Fatty-Acid-[Acyl-Carrier-Protein] Ligase; Facilitator Superfamily Permease; Acyltransferase Protein; Transporter-Like Acyltransferase Protein; Acyltransferase Domain-Containing Protein; Transmembrane Protein; Acyltransferase Domain Protein; MFS Permease; Inner Membrane Protein YgeD; Facilitator Superfamily Transmembrane Protein; Fatty Acid Permease / Acyltransferase Fusion Protein
Number of amino acids: Translated: 440; Mature: 439
Protein sequence:
>440_residues MTTSTHLVRTRRFLPLFVTQLLGAFNDNLYKNAMVLYVVYSVYNSEAAEARFSAIASGLFILPFFLLSALAGQLADMRDK ARIIRIVKACEIAIMLVGGTGLVLAWLGMEVEAIAIPLMLAALLAMGVHSTFFGPIKYAILPQHLHEGEVLAGTGLVEAG TYIAILAGTILAGWIPVEVAAAGVVLTALVGYVSGRQVPPAPPMIDAQKIDYNVLTSSYDLIRNTTRHRQVFMAIVAISF FWTVGTVLFIQFPPLAKNVLSASKEVASLFLVMFSIGIAVGSMSINALLKGTVSARFAPASVIVMGLFITAFHYVCRAWN VHPDAPLMDVAAFIAQPLAVPLLLCLLGIAIAGGMFVVPLYAFLTTVVDKSETARTIAANNIVNSGAMVIGSLIAGGLTW IGVTIVDQLMLGAAMCIVSAWLGWLLYKAEREVRQSGVTR
Sequences:
>Translated_440_residues MTTSTHLVRTRRFLPLFVTQLLGAFNDNLYKNAMVLYVVYSVYNSEAAEARFSAIASGLFILPFFLLSALAGQLADMRDK ARIIRIVKACEIAIMLVGGTGLVLAWLGMEVEAIAIPLMLAALLAMGVHSTFFGPIKYAILPQHLHEGEVLAGTGLVEAG TYIAILAGTILAGWIPVEVAAAGVVLTALVGYVSGRQVPPAPPMIDAQKIDYNVLTSSYDLIRNTTRHRQVFMAIVAISF FWTVGTVLFIQFPPLAKNVLSASKEVASLFLVMFSIGIAVGSMSINALLKGTVSARFAPASVIVMGLFITAFHYVCRAWN VHPDAPLMDVAAFIAQPLAVPLLLCLLGIAIAGGMFVVPLYAFLTTVVDKSETARTIAANNIVNSGAMVIGSLIAGGLTW IGVTIVDQLMLGAAMCIVSAWLGWLLYKAEREVRQSGVTR >Mature_439_residues TTSTHLVRTRRFLPLFVTQLLGAFNDNLYKNAMVLYVVYSVYNSEAAEARFSAIASGLFILPFFLLSALAGQLADMRDKA RIIRIVKACEIAIMLVGGTGLVLAWLGMEVEAIAIPLMLAALLAMGVHSTFFGPIKYAILPQHLHEGEVLAGTGLVEAGT YIAILAGTILAGWIPVEVAAAGVVLTALVGYVSGRQVPPAPPMIDAQKIDYNVLTSSYDLIRNTTRHRQVFMAIVAISFF WTVGTVLFIQFPPLAKNVLSASKEVASLFLVMFSIGIAVGSMSINALLKGTVSARFAPASVIVMGLFITAFHYVCRAWNV HPDAPLMDVAAFIAQPLAVPLLLCLLGIAIAGGMFVVPLYAFLTTVVDKSETARTIAANNIVNSGAMVIGSLIAGGLTWI GVTIVDQLMLGAAMCIVSAWLGWLLYKAEREVRQSGVTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.51
Molecular weight: Translated: 47065; Mature: 46933
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSTHLVRTRRFLPLFVTQLLGAFNDNLYKNAMVLYVVYSVYNSEAAEARFSAIASGLF CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ILPFFLLSALAGQLADMRDKARIIRIVKACEIAIMLVGGTGLVLAWLGMEVEAIAIPLML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHCCHHHHHHHHHHH AALLAMGVHSTFFGPIKYAILPQHLHEGEVLAGTGLVEAGTYIAILAGTILAGWIPVEVA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHCCHHHHHH AAGVVLTALVGYVSGRQVPPAPPMIDAQKIDYNVLTSSYDLIRNTTRHRQVFMAIVAISF HHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FWTVGTVLFIQFPPLAKNVLSASKEVASLFLVMFSIGIAVGSMSINALLKGTVSARFAPA HHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH SVIVMGLFITAFHYVCRAWNVHPDAPLMDVAAFIAQPLAVPLLLCLLGIAIAGGMFVVPL HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH YAFLTTVVDKSETARTIAANNIVNSGAMVIGSLIAGGLTWIGVTIVDQLMLGAAMCIVSA HHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WLGWLLYKAEREVRQSGVTR HHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TTSTHLVRTRRFLPLFVTQLLGAFNDNLYKNAMVLYVVYSVYNSEAAEARFSAIASGLF CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ILPFFLLSALAGQLADMRDKARIIRIVKACEIAIMLVGGTGLVLAWLGMEVEAIAIPLML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHCCHHHHHHHHHHH AALLAMGVHSTFFGPIKYAILPQHLHEGEVLAGTGLVEAGTYIAILAGTILAGWIPVEVA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHCCHHHHHH AAGVVLTALVGYVSGRQVPPAPPMIDAQKIDYNVLTSSYDLIRNTTRHRQVFMAIVAISF HHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FWTVGTVLFIQFPPLAKNVLSASKEVASLFLVMFSIGIAVGSMSINALLKGTVSARFAPA HHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH SVIVMGLFITAFHYVCRAWNVHPDAPLMDVAAFIAQPLAVPLLLCLLGIAIAGGMFVVPL HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH YAFLTTVVDKSETARTIAANNIVNSGAMVIGSLIAGGLTWIGVTIVDQLMLGAAMCIVSA HHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WLGWLLYKAEREVRQSGVTR HHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: acyl-CoA; 1-acyl-sn-glycerol 3-phosphate
Specific reaction: acyl-CoA + 1-acyl-sn-glycerol 3-phosphate = CoA + 1,2-diacyl-sn-glycerol 3-phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA