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The map label for this gene is 87199353

Identifier: 87199353

GI number: 87199353

Start: 1374166

End: 1374348

Strand: Direct

Name: 87199353

Synonym: Saro_1332

Alternate gene names: NA

Gene position: 1374166-1374348 (Clockwise)

Preceding gene: 87199352

Following gene: 87199354

Centisome position: 38.58

GC content: 66.12

Gene sequence:

>183_bases
ATGGGTGAGATGAAGGACCGCGCAAAGGGTCTTGCCAACGAAGCCGCCGGCAATCTCAAGCAGGCCGCCGGCAAGGCCAC
CGATGACGCCAGCCTCCATGCCGAAGGCACCGCGCAGGAGCGCAAGGGCGAAGCGCAGCAGCTGGCCGGCAAGGTCAAGG
GTGCGCTGGGCAACGAGATCTGA

Upstream 100 bases:

>100_bases
GGAATGGGCGTTGATCCTCAAGATGGCTGGGGTGAACTGAGGGAACGAACGCTGCCTCCACCCGTATTTCCTTCAAGCAA
GCTATTGAAGGAGAACGATC

Downstream 100 bases:

>100_bases
TCGTCGCGCAGAAGTGGAAAGGCCGCTCCCGCAAGGGGGCGGCCTTTTCGCATCGATTTGCCGATTGTGTACCGGGTTGG
CACGCCAACTTTTTTGAATG

Product: CsbD-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 59

Protein sequence:

>60_residues
MGEMKDRAKGLANEAAGNLKQAAGKATDDASLHAEGTAQERKGEAQQLAGKVKGALGNEI

Sequences:

>Translated_60_residues
MGEMKDRAKGLANEAAGNLKQAAGKATDDASLHAEGTAQERKGEAQQLAGKVKGALGNEI
>Mature_59_residues
GEMKDRAKGLANEAAGNLKQAAGKATDDASLHAEGTAQERKGEAQQLAGKVKGALGNEI

Specific function: Unknown

COG id: COG3237

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0337 (CsbD) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008462 [H]

Pfam domain/function: PF05532 CsbD [H]

EC number: NA

Molecular weight: Translated: 6107; Mature: 5976

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEMKDRAKGLANEAAGNLKQAAGKATDDASLHAEGTAQERKGEAQQLAGKVKGALGNEI
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GEMKDRAKGLANEAAGNLKQAAGKATDDASLHAEGTAQERKGEAQQLAGKVKGALGNEI
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]