| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199350
Identifier: 87199350
GI number: 87199350
Start: 1371876
End: 1372580
Strand: Direct
Name: 87199350
Synonym: Saro_1329
Alternate gene names: NA
Gene position: 1371876-1372580 (Clockwise)
Preceding gene: 87199349
Following gene: 87199352
Centisome position: 38.52
GC content: 64.54
Gene sequence:
>705_bases ATGCGGGCGATCCTGCCGATCCTCGCGCTGCTTCTGGCCACCGGGGCGACGAAGCCGGTGCCGATGGACCCGCGCAATCC CTCGTGCCCCGAGAAGGTCGACTGGGGCGTCGCCAAGGCGATGGCGCTGTCGGTGGCGGACAAGGGCGGCCGGCACGTCC TGATCGCCGACGGCATCATCGACGCGCGCCTTCCCGCCCGGCTCAAGGCGGCGCTCGATGCCGACGAGCGGATCGAGGAA ATATGGCTTAAATCAAGGGGTGGGGATGCCGAGGCGGGGAACCGGGCGGGGAAGGTGATCCGTTCCTACCCGGGCATGGT GACGCGCATTCCGGCGGGGTGGACCTGCTTTTCCGCCTGCAACTTCGTCTTCATGGGCGGCGACCGGCGATTCGTGGACC CCGGCGGGATCTTCATGGTCCACATGTTCACCCACACCGGCGACCGCGATGTCATTGAAATATCGGTCGATGAGGGCACC GAGGAGACGACGCGGCTGATCGGGGAGATCGAGCAGTCGAGCGCGCTCCTCGCCAGCGAGGACAACGATTTCCTGATCCG CATGGGCATCAGCCGCAAGCTTCTGACCGAGATCATGTACCGCCAGCAGGCAGTCGCGACGAAGGAGAATCCCTCGACCC GCTACTGCCTGAATCAGGAAGAAGTCAGGAAATACAACGTCGTTCCGCTCGAAAAGGCCGAATGA
Upstream 100 bases:
>100_bases TCACGGTGACCGACGTCATCATCGTCAATGGCGAGGAAACGACCGCCAACAAGCGCATGTGCCGCGCACCGGGTTCGGCG CGCTACGCCCTGGCGGCCTG
Downstream 100 bases:
>100_bases CCCGAACGGCACCTAAAAGCACCTAACGATACCTGGCCGCACTCGGGTGTCCGCGACGCGGGCCCCGGTACGGCGCGGGC GTTACTTGCGCAGGCCGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MRAILPILALLLATGATKPVPMDPRNPSCPEKVDWGVAKAMALSVADKGGRHVLIADGIIDARLPARLKAALDADERIEE IWLKSRGGDAEAGNRAGKVIRSYPGMVTRIPAGWTCFSACNFVFMGGDRRFVDPGGIFMVHMFTHTGDRDVIEISVDEGT EETTRLIGEIEQSSALLASEDNDFLIRMGISRKLLTEIMYRQQAVATKENPSTRYCLNQEEVRKYNVVPLEKAE
Sequences:
>Translated_234_residues MRAILPILALLLATGATKPVPMDPRNPSCPEKVDWGVAKAMALSVADKGGRHVLIADGIIDARLPARLKAALDADERIEE IWLKSRGGDAEAGNRAGKVIRSYPGMVTRIPAGWTCFSACNFVFMGGDRRFVDPGGIFMVHMFTHTGDRDVIEISVDEGT EETTRLIGEIEQSSALLASEDNDFLIRMGISRKLLTEIMYRQQAVATKENPSTRYCLNQEEVRKYNVVPLEKAE >Mature_234_residues MRAILPILALLLATGATKPVPMDPRNPSCPEKVDWGVAKAMALSVADKGGRHVLIADGIIDARLPARLKAALDADERIEE IWLKSRGGDAEAGNRAGKVIRSYPGMVTRIPAGWTCFSACNFVFMGGDRRFVDPGGIFMVHMFTHTGDRDVIEISVDEGT EETTRLIGEIEQSSALLASEDNDFLIRMGISRKLLTEIMYRQQAVATKENPSTRYCLNQEEVRKYNVVPLEKAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25790; Mature: 25790
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAILPILALLLATGATKPVPMDPRNPSCPEKVDWGVAKAMALSVADKGGRHVLIADGII CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCC DARLPARLKAALDADERIEEIWLKSRGGDAEAGNRAGKVIRSYPGMVTRIPAGWTCFSAC CCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEEEECCCCEEHHHHC NFVFMGGDRRFVDPGGIFMVHMFTHTGDRDVIEISVDEGTEETTRLIGEIEQSSALLASE CEEEECCCEEEECCCCEEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHCCEEEECC DNDFLIRMGISRKLLTEIMYRQQAVATKENPSTRYCLNQEEVRKYNVVPLEKAE CCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHCCCCCCCCCC >Mature Secondary Structure MRAILPILALLLATGATKPVPMDPRNPSCPEKVDWGVAKAMALSVADKGGRHVLIADGII CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCC DARLPARLKAALDADERIEEIWLKSRGGDAEAGNRAGKVIRSYPGMVTRIPAGWTCFSAC CCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEEEECCCCEEHHHHC NFVFMGGDRRFVDPGGIFMVHMFTHTGDRDVIEISVDEGTEETTRLIGEIEQSSALLASE CEEEECCCEEEECCCCEEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHCCEEEECC DNDFLIRMGISRKLLTEIMYRQQAVATKENPSTRYCLNQEEVRKYNVVPLEKAE CCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA