| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is aroA
Identifier: 87199347
GI number: 87199347
Start: 1369010
End: 1370335
Strand: Reverse
Name: aroA
Synonym: Saro_1326
Alternate gene names: 87199347
Gene position: 1370335-1369010 (Counterclockwise)
Preceding gene: 87199351
Following gene: 87199346
Centisome position: 38.48
GC content: 70.14
Gene sequence:
>1326_bases ATGCGCCCTCGCCGCTTCACCGCCAATGGCCCGCTCAAGGGCCGCATCGGCGTGCCCGGCGACAAGTCGATCAGCCACCG CTCGATCATGCTCGGCGCGCTGGCAGTGGGCGAGACGCGCGTGACCGGCCTGCTCGAAGGCGAGGACGTCCTTTCCACCG CCGCCGCGATGCGCGCGATGGGCGCGACGATCGAACGCGACGCGGACGGCATGTGGCACGTTCACGGCGTTGGCGTGGGC GGCCTGCTCCAGCCGCAACAGGCGCTGGACATGGGCAATTCGGGCACGTCGACCCGCCTGCTGATGGGCCTTGTCGCAAC CCACCCGATCACGGCGACGTTCGTGGGCGATGCTTCGCTGTCGAAGCGCCCGATGGGCCGCGTGATCGATCCGCTCTCGA CGATGGGCGCCGAGTTCACCGCATCGCCGGGTGGCCGCCTGCCCCTTACCCTGCGCGGAATTTCACCTGCCGTGCCAATC GAATACCGCCTCCCCGTCGCATCGGCGCAGGTGAAGAGCGCGGTCCTGCTCGCGGGCCTCAACACGCCCGGCGTGACCAC GGTAATCGAACCGATCCCCACCCGCGACCATTCCGAACGCATGCTGCGCGGCTTCGGCGCGGAGCTGACCGTCGATGTCG CCGCCGATGGCGCGCGCGTCATCAGGGTGCGCGGCGAGGCCGAACTCAAGCCGCAGGACATCGCCGTCCCCGGCGACCCG TCATCCGCCGCGTTCTTCGTGGTGGCGGCGCTGCTGGTCGAAGGCTCGGACCTCGTCGTCGAGAACGTCGGCCTCAACCC CACCCGCGCCGCGCTGTTCGACGTGCTGCGCCTGATGGGCGGCTCCATCGAGGAGCTGAACCGGCGCGAAGTGGGCGGCG AACCGGTGGCGGACCTGCGCGTGCGCCACTCGCTGCTGACCGGCATCGATGTCGATCCCGCCGTAGTGCCGAGCATGGTC GACGAATTCCCGGTGCTGTTCGTCGCCGCCGCCCTTGCCAAGGGCCGCACGGTGACGACCGGCCTCGAGGAACTGCGCGT GAAGGAAAGCGACCGCATCAGCGCGATGCGCGCCGCGCTCGAACTGGCAGGCGCGACCGTCACCGAGACCGAGGACGGCC TGATCATCGACGGCACCGGCGGCGACCCCCTGCCCGGCACCGCAGAGGGCGCGAGCGTCGTCACGCACCTCGACCACCGC ATCGCGATGAGCATGGCGATTGCCGGCATCGCCAGCCGCAACGGCGTGGAAGTGGATGACACCCGCCCCATCGCCACCAG CTTCCCGGTGTTCGAGAGCCTGCTGGAAAGCGCGACCAGGCCGTGA
Upstream 100 bases:
>100_bases GCGCGTGTCGCTGTCAAAAGCCCCGCGCTTCAAACCGCACTTCGGCCCTGCCCTTCAGCGCGAAAGACGAAACTCCGTGT CTTCCCACGACCCTGCCCTC
Downstream 100 bases:
>100_bases TGTCCGACCTGCTCGTCAATGTGATCGGCTTTGCAGGGATGGCCTGTATCATCTTCGCCTACGGCTATTCGACCAAGCTG GAGCGGCCCAATCCCTTCGT
Product: 3-phosphoshikimate 1-carboxyvinyltransferase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS
Number of amino acids: Translated: 441; Mature: 441
Protein sequence:
>441_residues MRPRRFTANGPLKGRIGVPGDKSISHRSIMLGALAVGETRVTGLLEGEDVLSTAAAMRAMGATIERDADGMWHVHGVGVG GLLQPQQALDMGNSGTSTRLLMGLVATHPITATFVGDASLSKRPMGRVIDPLSTMGAEFTASPGGRLPLTLRGISPAVPI EYRLPVASAQVKSAVLLAGLNTPGVTTVIEPIPTRDHSERMLRGFGAELTVDVAADGARVIRVRGEAELKPQDIAVPGDP SSAAFFVVAALLVEGSDLVVENVGLNPTRAALFDVLRLMGGSIEELNRREVGGEPVADLRVRHSLLTGIDVDPAVVPSMV DEFPVLFVAAALAKGRTVTTGLEELRVKESDRISAMRAALELAGATVTETEDGLIIDGTGGDPLPGTAEGASVVTHLDHR IAMSMAIAGIASRNGVEVDDTRPIATSFPVFESLLESATRP
Sequences:
>Translated_441_residues MRPRRFTANGPLKGRIGVPGDKSISHRSIMLGALAVGETRVTGLLEGEDVLSTAAAMRAMGATIERDADGMWHVHGVGVG GLLQPQQALDMGNSGTSTRLLMGLVATHPITATFVGDASLSKRPMGRVIDPLSTMGAEFTASPGGRLPLTLRGISPAVPI EYRLPVASAQVKSAVLLAGLNTPGVTTVIEPIPTRDHSERMLRGFGAELTVDVAADGARVIRVRGEAELKPQDIAVPGDP SSAAFFVVAALLVEGSDLVVENVGLNPTRAALFDVLRLMGGSIEELNRREVGGEPVADLRVRHSLLTGIDVDPAVVPSMV DEFPVLFVAAALAKGRTVTTGLEELRVKESDRISAMRAALELAGATVTETEDGLIIDGTGGDPLPGTAEGASVVTHLDHR IAMSMAIAGIASRNGVEVDDTRPIATSFPVFESLLESATRP >Mature_441_residues MRPRRFTANGPLKGRIGVPGDKSISHRSIMLGALAVGETRVTGLLEGEDVLSTAAAMRAMGATIERDADGMWHVHGVGVG GLLQPQQALDMGNSGTSTRLLMGLVATHPITATFVGDASLSKRPMGRVIDPLSTMGAEFTASPGGRLPLTLRGISPAVPI EYRLPVASAQVKSAVLLAGLNTPGVTTVIEPIPTRDHSERMLRGFGAELTVDVAADGARVIRVRGEAELKPQDIAVPGDP SSAAFFVVAALLVEGSDLVVENVGLNPTRAALFDVLRLMGGSIEELNRREVGGEPVADLRVRHSLLTGIDVDPAVVPSMV DEFPVLFVAAALAKGRTVTTGLEELRVKESDRISAMRAALELAGATVTETEDGLIIDGTGGDPLPGTAEGASVVTHLDHR IAMSMAIAGIASRNGVEVDDTRPIATSFPVFESLLESATRP
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; sixth step. [C]
COG id: COG0128
COG function: function code E; 5-enolpyruvylshikimate-3-phosphate synthase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the EPSP synthase family
Homologues:
Organism=Escherichia coli, GI1787137, Length=432, Percent_Identity=29.6296296296296, Blast_Score=120, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6320332, Length=437, Percent_Identity=27.9176201372998, Blast_Score=114, Evalue=5e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROA_NOVAD (Q2G8Q3)
Other databases:
- EMBL: CP000248 - RefSeq: YP_496604.1 - ProteinModelPortal: Q2G8Q3 - SMR: Q2G8Q3 - STRING: Q2G8Q3 - GeneID: 3917775 - GenomeReviews: CP000248_GR - KEGG: nar:Saro_1326 - NMPDR: fig|48935.1.peg.259 - eggNOG: COG0128 - HOGENOM: HBG646626 - OMA: LSRNHTE - ProtClustDB: PRK02427 - BioCyc: NARO279238:SARO_1326-MONOMER - GO: GO:0005737 - HAMAP: MF_00210 - InterPro: IPR001986 - InterPro: IPR006264 - InterPro: IPR023193 - InterPro: IPR013792 - Gene3D: G3DSA:3.65.10.10 - PIRSF: PIRSF000505 - TIGRFAMs: TIGR01356
Pfam domain/function: PF00275 EPSP_synthase; SSF55205 RNA3'_cycl/enolpyr_transf_A/B
EC number: =2.5.1.19
Molecular weight: Translated: 45990; Mature: 45990
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: PS00104 EPSP_SYNTHASE_1; PS00885 EPSP_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPRRFTANGPLKGRIGVPGDKSISHRSIMLGALAVGETRVTGLLEGEDVLSTAAAMRAM CCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEEEECCHHEEEEECCHHHHHHHHHHHHH GATIERDADGMWHVHGVGVGGLLQPQQALDMGNSGTSTRLLMGLVATHPITATFVGDASL CCCCCCCCCCEEEEEEECCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCEEEEEECCCCC SKRPMGRVIDPLSTMGAEFTASPGGRLPLTLRGISPAVPIEYRLPVASAQVKSAVLLAGL CCCCHHHHHCCHHHCCCEEECCCCCCCCEEEECCCCCCCEEEECCCHHHHHHCEEEEEEC NTPGVTTVIEPIPTRDHSERMLRGFGAELTVDVAADGARVIRVRGEAELKPQDIAVPGDP CCCCCEEEECCCCCCCHHHHHHHHCCCEEEEEEECCCEEEEEEECCCCCCCCCEECCCCC SSAAFFVVAALLVEGSDLVVENVGLNPTRAALFDVLRLMGGSIEELNRREVGGEPVADLR CHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHH VRHSLLTGIDVDPAVVPSMVDEFPVLFVAAALAKGRTVTTGLEELRVKESDRISAMRAAL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHCCCHHHHHHHHHHH ELAGATVTETEDGLIIDGTGGDPLPGTAEGASVVTHLDHRIAMSMAIAGIASRNGVEVDD HHHCCEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC TRPIATSFPVFESLLESATRP CCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MRPRRFTANGPLKGRIGVPGDKSISHRSIMLGALAVGETRVTGLLEGEDVLSTAAAMRAM CCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEEEECCHHEEEEECCHHHHHHHHHHHHH GATIERDADGMWHVHGVGVGGLLQPQQALDMGNSGTSTRLLMGLVATHPITATFVGDASL CCCCCCCCCCEEEEEEECCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCEEEEEECCCCC SKRPMGRVIDPLSTMGAEFTASPGGRLPLTLRGISPAVPIEYRLPVASAQVKSAVLLAGL CCCCHHHHHCCHHHCCCEEECCCCCCCCEEEECCCCCCCEEEECCCHHHHHHCEEEEEEC NTPGVTTVIEPIPTRDHSERMLRGFGAELTVDVAADGARVIRVRGEAELKPQDIAVPGDP CCCCCEEEECCCCCCCHHHHHHHHCCCEEEEEEECCCEEEEEEECCCCCCCCCEECCCCC SSAAFFVVAALLVEGSDLVVENVGLNPTRAALFDVLRLMGGSIEELNRREVGGEPVADLR CHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHH VRHSLLTGIDVDPAVVPSMVDEFPVLFVAAALAKGRTVTTGLEELRVKESDRISAMRAAL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHCCCHHHHHHHHHHH ELAGATVTETEDGLIIDGTGGDPLPGTAEGASVVTHLDHRIAMSMAIAGIASRNGVEVDD HHHCCEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC TRPIATSFPVFESLLESATRP CCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA