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The map label for this gene is 87199206

Identifier: 87199206

GI number: 87199206

Start: 1225715

End: 1226656

Strand: Reverse

Name: 87199206

Synonym: Saro_1184

Alternate gene names: NA

Gene position: 1226656-1225715 (Counterclockwise)

Preceding gene: 87199207

Following gene: 87199205

Centisome position: 34.44

GC content: 65.07

Gene sequence:

>942_bases
ATGTCGTGGCATAGCGCCGCAGCCGCCTCGCAAACGGGGCTTGCCGCCCTTGCCGTGGCAATGCTGGCGCTGACCGGCTG
CGGGGGCAGCGACGGCGGGTCACCGACACCGACGCCCACGGTAACGCCGGCCCCGACACCCACGCCAACGCCAACGCCAA
CTCCGACGCCCACCCCGACACCAACCCCGACGCCTACCCCCACTCCCACGCCGGGAGGCCTCGCGAGCTGGGACTGGATA
TTGCAAAGCCAGGGACTCCCGGCCACGCCACCCGCCGTGGCCTATCTCGACGTCGACGGCTTCGATACGCCCAAGAGCTA
CGTCACGCTGGCCAAGGCGGCGGGCACGAAGACGATCTGCTATCTGAACGTCGGCACGGCAGAGAACTTCCGCCCGGACT
ATTCCCAGTTTTCCGCGATTTCGGGCCTGCTCGGCAACAGCTATCCGGGGTTTTCCGGCGAACGCTATATCGACATCCGG
CGCTATCCCGAGTTCATCCAGATCATGGACAACCGGCTGGTCATGTGCCGGGACAAGGGCTTCGACCTTGTCGAATTCGA
TGTGATGGACGCCTTCGAGGACGGTGCCTCCACGGTGGGCTTCCCGCTGACCGAAGCCGACATGATCGCATATGTGACCG
CCCTGTCCGCGCGGGCGCGGGGCTATGGGCTGAAGCCGGTGCAGAAGAATGCAGGCGGTTCCTCGGCAAAGATCGTGACG
CTGTTCGACGCGGTGCTGTTCGAGGATTGCGTTTTGGGCAACTTCTGCTCGGACGACGCGCCCTACATCGCCGCGGGCAA
GCCGGCGTTCAACGCGGAGTATCCGGAAAACTGGGGCAGCTTCGACCGGGCCAGGGTTTGCGCCACATCCGCAGCGGCGA
AGATTTCGACGATCATCACGGTTATCGACCTGGACCGCCCGGCGCCGGATCGATGTACCTGA

Upstream 100 bases:

>100_bases
AAGTGCATTTGGCCGCCAGCGCGACCATGAATGCCCCCGTCGTTCCATCGCTGGAGTACGCTTCCTGCGCCCGGTGGGTG
ACGGCAGGAGGAGAACCGCC

Downstream 100 bases:

>100_bases
GCGGATGATCGCGGCGTTTGCGCGGGATCGGCGCCCCCACGCTCGGCCTGCCGCAAAACCGTTTCACATCACATGGTTAT
CAGTTCCTTTACCTTGTCGT

Product: endo alpha-1,4 polygalactosaminidase

Products: NA

Alternate protein names: Endo Alpha-1 4 Polygalactosaminidase Precusor; Lipoprotein

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MSWHSAAAASQTGLAALAVAMLALTGCGGSDGGSPTPTPTVTPAPTPTPTPTPTPTPTPTPTPTPTPTPTPGGLASWDWI
LQSQGLPATPPAVAYLDVDGFDTPKSYVTLAKAAGTKTICYLNVGTAENFRPDYSQFSAISGLLGNSYPGFSGERYIDIR
RYPEFIQIMDNRLVMCRDKGFDLVEFDVMDAFEDGASTVGFPLTEADMIAYVTALSARARGYGLKPVQKNAGGSSAKIVT
LFDAVLFEDCVLGNFCSDDAPYIAAGKPAFNAEYPENWGSFDRARVCATSAAAKISTIITVIDLDRPAPDRCT

Sequences:

>Translated_313_residues
MSWHSAAAASQTGLAALAVAMLALTGCGGSDGGSPTPTPTVTPAPTPTPTPTPTPTPTPTPTPTPTPTPTPGGLASWDWI
LQSQGLPATPPAVAYLDVDGFDTPKSYVTLAKAAGTKTICYLNVGTAENFRPDYSQFSAISGLLGNSYPGFSGERYIDIR
RYPEFIQIMDNRLVMCRDKGFDLVEFDVMDAFEDGASTVGFPLTEADMIAYVTALSARARGYGLKPVQKNAGGSSAKIVT
LFDAVLFEDCVLGNFCSDDAPYIAAGKPAFNAEYPENWGSFDRARVCATSAAAKISTIITVIDLDRPAPDRCT
>Mature_312_residues
SWHSAAAASQTGLAALAVAMLALTGCGGSDGGSPTPTPTVTPAPTPTPTPTPTPTPTPTPTPTPTPTPTPGGLASWDWIL
QSQGLPATPPAVAYLDVDGFDTPKSYVTLAKAAGTKTICYLNVGTAENFRPDYSQFSAISGLLGNSYPGFSGERYIDIRR
YPEFIQIMDNRLVMCRDKGFDLVEFDVMDAFEDGASTVGFPLTEADMIAYVTALSARARGYGLKPVQKNAGGSSAKIVTL
FDAVLFEDCVLGNFCSDDAPYIAAGKPAFNAEYPENWGSFDRARVCATSAAAKISTIITVIDLDRPAPDRCT

Specific function: Unknown

COG id: COG3868

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32913; Mature: 32782

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWHSAAAASQTGLAALAVAMLALTGCGGSDGGSPTPTPTVTPAPTPTPTPTPTPTPTPT
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PTPTPTPTPTPGGLASWDWILQSQGLPATPPAVAYLDVDGFDTPKSYVTLAKAAGTKTIC
CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHEEHHHCCCCEEEE
YLNVGTAENFRPDYSQFSAISGLLGNSYPGFSGERYIDIRRYPEFIQIMDNRLVMCRDKG
EEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEHHHCHHHHHHHCCCEEEEECCC
FDLVEFDVMDAFEDGASTVGFPLTEADMIAYVTALSARARGYGLKPVQKNAGGSSAKIVT
CCEEEEHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCEEHHH
LFDAVLFEDCVLGNFCSDDAPYIAAGKPAFNAEYPENWGSFDRARVCATSAAAKISTIIT
HHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEE
VIDLDRPAPDRCT
EEECCCCCCCCCC
>Mature Secondary Structure 
SWHSAAAASQTGLAALAVAMLALTGCGGSDGGSPTPTPTVTPAPTPTPTPTPTPTPTPT
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PTPTPTPTPTPGGLASWDWILQSQGLPATPPAVAYLDVDGFDTPKSYVTLAKAAGTKTIC
CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHEEHHHCCCCEEEE
YLNVGTAENFRPDYSQFSAISGLLGNSYPGFSGERYIDIRRYPEFIQIMDNRLVMCRDKG
EEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEHHHCHHHHHHHCCCEEEEECCC
FDLVEFDVMDAFEDGASTVGFPLTEADMIAYVTALSARARGYGLKPVQKNAGGSSAKIVT
CCEEEEHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCEEHHH
LFDAVLFEDCVLGNFCSDDAPYIAAGKPAFNAEYPENWGSFDRARVCATSAAAKISTIIT
HHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEE
VIDLDRPAPDRCT
EEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA