| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199198
Identifier: 87199198
GI number: 87199198
Start: 1215757
End: 1216803
Strand: Reverse
Name: 87199198
Synonym: Saro_1176
Alternate gene names: NA
Gene position: 1216803-1215757 (Counterclockwise)
Preceding gene: 87199199
Following gene: 87199197
Centisome position: 34.16
GC content: 70.77
Gene sequence:
>1047_bases GTGCGCCTCGCACAGCGACTGGGCCTGCGGCATCCGCTGATACAGGCACCGATGGCGGGGACATCCACCCCCTCCCTTGC CGCTGCCGTGTGCGAGGCGGGCGCGCTGGGGTCCGTCGCGGTGGGTGCGGTCGATGCCGGGACGGCGCGAACGATGATCG CCGACCTGCGGGCGCGGACCGCGCGGCCGTTCAACGTCAATGCCTTCGTCCACCACAGGGCCCTGCGCGACCTTGCGGCG GAACAGGCATGGATCGCGGCGATGGCGCCGCTGTTCGAACGGTTCGGGGCCGCGCCACCTGCCGCGTTGAACGAGATCTA CCGTTCGCTGAACGACGATCCGGACATGCTGGCAGTGCTGGTGGAGGCCGCGCCTGCGGTGGTGAGCTTCCATTTCGGAC TGCCGACGGACGAGGCCATCGCCGCGTTGAAGGCGCGTGGGTGCATGCTGATGGCGAGCGCCACGTCGCTTGCCGAGGCC GAGGCGGCGGTCGCGGCCGGCATGGATGCGGTAGTCGCACAAGGGTTCGAGGCGGGCGGCCACCGGGGCGTATTCGATCC CGAAGCGCCGGACGAACGGATGCCGACGCTTGACCTGGTGCGGTTGCTGTCGTCCCGGCTGGACGTTCCCGTAATCGCGG CGGGCGGGATCATGGACGGGGCGGACATACGCCGCGCACTGGACGCCGGAGCGGATGCGGCACAACTTGGCACGGCATTC GTGGGCTGTCCCGAAAGCGCGGCGGACGCCGGCTATCGCGCGATGCTGGCGCGGGCCAAGGGCACGACGCTGACGGCGGC GATATCGGGGCGCCCCGCCAGGTGCCTCGACAACGATTTCGTCGCGTGGGCGCGCGATACCGATGCGCGCGTGCCCGGCT ATCCGGTGACGTACGATGCCGGAAAGGCGCTGATCGCGGCGGCAAAGGGCGCGGGCGAATGCGGGTTCGGCGCGCATTGG GCCGGAACGCAGTTCGCGCGCGCGCGGCCCATGCCCGCAGGGGAACTGGTCATGCTTCTGGCGCAGGAGGCCGGGTTCGA TGCCTGA
Upstream 100 bases:
>100_bases GCAACAACAACCGCGAAGACGTGAAGACCTTTACCGAGGCGGCCGAGCGCATCCAGGCGCTGAAGGGCAAGCTGGAAGCG CTGCTGGGCGACTGAGCGCG
Downstream 100 bases:
>100_bases AATGCCGAGCGCCGACCTTTCCTACCTGATCGGACTGCTCGACCTTGCGGGCATTGCCGTCTTCGCGCTGACCGGGGCGC TGCTGGCGGCGCAACTGCGG
Product: 2-nitropropane dioxygenase
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MRLAQRLGLRHPLIQAPMAGTSTPSLAAAVCEAGALGSVAVGAVDAGTARTMIADLRARTARPFNVNAFVHHRALRDLAA EQAWIAAMAPLFERFGAAPPAALNEIYRSLNDDPDMLAVLVEAAPAVVSFHFGLPTDEAIAALKARGCMLMASATSLAEA EAAVAAGMDAVVAQGFEAGGHRGVFDPEAPDERMPTLDLVRLLSSRLDVPVIAAGGIMDGADIRRALDAGADAAQLGTAF VGCPESAADAGYRAMLARAKGTTLTAAISGRPARCLDNDFVAWARDTDARVPGYPVTYDAGKALIAAAKGAGECGFGAHW AGTQFARARPMPAGELVMLLAQEAGFDA
Sequences:
>Translated_348_residues MRLAQRLGLRHPLIQAPMAGTSTPSLAAAVCEAGALGSVAVGAVDAGTARTMIADLRARTARPFNVNAFVHHRALRDLAA EQAWIAAMAPLFERFGAAPPAALNEIYRSLNDDPDMLAVLVEAAPAVVSFHFGLPTDEAIAALKARGCMLMASATSLAEA EAAVAAGMDAVVAQGFEAGGHRGVFDPEAPDERMPTLDLVRLLSSRLDVPVIAAGGIMDGADIRRALDAGADAAQLGTAF VGCPESAADAGYRAMLARAKGTTLTAAISGRPARCLDNDFVAWARDTDARVPGYPVTYDAGKALIAAAKGAGECGFGAHW AGTQFARARPMPAGELVMLLAQEAGFDA >Mature_348_residues MRLAQRLGLRHPLIQAPMAGTSTPSLAAAVCEAGALGSVAVGAVDAGTARTMIADLRARTARPFNVNAFVHHRALRDLAA EQAWIAAMAPLFERFGAAPPAALNEIYRSLNDDPDMLAVLVEAAPAVVSFHFGLPTDEAIAALKARGCMLMASATSLAEA EAAVAAGMDAVVAQGFEAGGHRGVFDPEAPDERMPTLDLVRLLSSRLDVPVIAAGGIMDGADIRRALDAGADAAQLGTAF VGCPESAADAGYRAMLARAKGTTLTAAISGRPARCLDNDFVAWARDTDARVPGYPVTYDAGKALIAAAKGAGECGFGAHW AGTQFARARPMPAGELVMLLAQEAGFDA
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322609, Length=338, Percent_Identity=33.4319526627219, Blast_Score=162, Evalue=5e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 35816; Mature: 35816
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLAQRLGLRHPLIQAPMAGTSTPSLAAAVCEAGALGSVAVGAVDAGTARTMIADLRART CCHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHC ARPFNVNAFVHHRALRDLAAEQAWIAAMAPLFERFGAAPPAALNEIYRSLNDDPDMLAVL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHH VEAAPAVVSFHFGLPTDEAIAALKARGCMLMASATSLAEAEAAVAAGMDAVVAQGFEAGG HHHCCCEEEEECCCCCHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCC HRGVFDPEAPDERMPTLDLVRLLSSRLDVPVIAAGGIMDGADIRRALDAGADAAQLGTAF CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHH VGCPESAADAGYRAMLARAKGTTLTAAISGRPARCLDNDFVAWARDTDARVPGYPVTYDA CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCEEECC GKALIAAAKGAGECGFGAHWAGTQFARARPMPAGELVMLLAQEAGFDA CCEEEEECCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MRLAQRLGLRHPLIQAPMAGTSTPSLAAAVCEAGALGSVAVGAVDAGTARTMIADLRART CCHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHC ARPFNVNAFVHHRALRDLAAEQAWIAAMAPLFERFGAAPPAALNEIYRSLNDDPDMLAVL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHH VEAAPAVVSFHFGLPTDEAIAALKARGCMLMASATSLAEAEAAVAAGMDAVVAQGFEAGG HHHCCCEEEEECCCCCHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCC HRGVFDPEAPDERMPTLDLVRLLSSRLDVPVIAAGGIMDGADIRRALDAGADAAQLGTAF CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHH VGCPESAADAGYRAMLARAKGTTLTAAISGRPARCLDNDFVAWARDTDARVPGYPVTYDA CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCEEECC GKALIAAAKGAGECGFGAHWAGTQFARARPMPAGELVMLLAQEAGFDA CCEEEEECCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA