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The map label for this gene is yadS [H]

Identifier: 87199197

GI number: 87199197

Start: 1215126

End: 1215764

Strand: Reverse

Name: yadS [H]

Synonym: Saro_1175

Alternate gene names: 87199197

Gene position: 1215764-1215126 (Counterclockwise)

Preceding gene: 87199198

Following gene: 87199190

Centisome position: 34.14

GC content: 70.27

Gene sequence:

>639_bases
ATGCCTGAAATGCCGAGCGCCGACCTTTCCTACCTGATCGGACTGCTCGACCTTGCGGGCATTGCCGTCTTCGCGCTGAC
CGGGGCGCTGCTGGCGGCGCAACTGCGGCAGACCTTCGTGACCATGGCATTCTTCGCGCTGGTGACGGGCGTGGGCGGCG
GATCGGTGCGCGATCTGCTGATCGGGGCGCCAGTGTTCTGGGTTCGCGATCCGTGGGTGGCGCCGGTGTGCCTTGGCGTG
GCGCTGGTCGCATGGTTCACGCCGCACCGCTGGTGGGAGCGGCCCGTGCTGGAATGGGCGGACGCGGCGGGGCTTGGCGC
CTATGCAGTGCTGGGCACGGTGAAAGCCCTGGCGTTCGGCGTGCCACCTGTTCCGGCGGTACTGATGGGAGTGATCACCG
GGTGCGTCGGCGGGATCATCCGCGACGTGCTTGCGGGCCGCCCGTCGATCCTGATGCGGCCGGAACTCTACGTGACGGCG
GCAGCGCTTTCGTCGGGGCTCTGCGCGGCGGGCGCGGCGCTGGGGCTCGCGAAAGGGCTGGTTTGGCCGGTCGCGGCGAT
GGCGGGGTTTGCGCTGCGCGGCGCGGCGATCTGGTGGCGACTGGGCTTGCCGACATATTCGGCGGAGCGCGAGGGCTGA

Upstream 100 bases:

>100_bases
TGCGGGTTCGGCGCGCATTGGGCCGGAACGCAGTTCGCGCGCGCGCGGCCCATGCCCGCAGGGGAACTGGTCATGCTTCT
GGCGCAGGAGGCCGGGTTCG

Downstream 100 bases:

>100_bases
CCACGGCGTCCTCCGCCCCCTCCCGCAAGCGGGAGGGGCGAGAGTGCCGTCAGCCGATCATTTCAACGACGACCTTGCCC
ATGGCCTGCCGGTTTTCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MPEMPSADLSYLIGLLDLAGIAVFALTGALLAAQLRQTFVTMAFFALVTGVGGGSVRDLLIGAPVFWVRDPWVAPVCLGV
ALVAWFTPHRWWERPVLEWADAAGLGAYAVLGTVKALAFGVPPVPAVLMGVITGCVGGIIRDVLAGRPSILMRPELYVTA
AALSSGLCAAGAALGLAKGLVWPVAAMAGFALRGAAIWWRLGLPTYSAEREG

Sequences:

>Translated_212_residues
MPEMPSADLSYLIGLLDLAGIAVFALTGALLAAQLRQTFVTMAFFALVTGVGGGSVRDLLIGAPVFWVRDPWVAPVCLGV
ALVAWFTPHRWWERPVLEWADAAGLGAYAVLGTVKALAFGVPPVPAVLMGVITGCVGGIIRDVLAGRPSILMRPELYVTA
AALSSGLCAAGAALGLAKGLVWPVAAMAGFALRGAAIWWRLGLPTYSAEREG
>Mature_211_residues
PEMPSADLSYLIGLLDLAGIAVFALTGALLAAQLRQTFVTMAFFALVTGVGGGSVRDLLIGAPVFWVRDPWVAPVCLGVA
LVAWFTPHRWWERPVLEWADAAGLGAYAVLGTVKALAFGVPPVPAVLMGVITGCVGGIIRDVLAGRPSILMRPELYVTAA
ALSSGLCAAGAALGLAKGLVWPVAAMAGFALRGAAIWWRLGLPTYSAEREG

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family [H]

Homologues:

Organism=Escherichia coli, GI1786352, Length=207, Percent_Identity=41.5458937198068, Blast_Score=94, Evalue=7e-21,
Organism=Escherichia coli, GI87082304, Length=148, Percent_Identity=37.1621621621622, Blast_Score=81, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005115 [H]

Pfam domain/function: PF03458 UPF0126 [H]

EC number: NA

Molecular weight: Translated: 22026; Mature: 21895

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEMPSADLSYLIGLLDLAGIAVFALTGALLAAQLRQTFVTMAFFALVTGVGGGSVRDLL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
IGAPVFWVRDPWVAPVCLGVALVAWFTPHRWWERPVLEWADAAGLGAYAVLGTVKALAFG
HCCCCCEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
VPPVPAVLMGVITGCVGGIIRDVLAGRPSILMRPELYVTAAALSSGLCAAGAALGLAKGL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHCCHHHHHHHHHHHHHH
VWPVAAMAGFALRGAAIWWRLGLPTYSAEREG
HHHHHHHHHHHHHHHHHHHEECCCCCCCCCCC
>Mature Secondary Structure 
PEMPSADLSYLIGLLDLAGIAVFALTGALLAAQLRQTFVTMAFFALVTGVGGGSVRDLL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
IGAPVFWVRDPWVAPVCLGVALVAWFTPHRWWERPVLEWADAAGLGAYAVLGTVKALAFG
HCCCCCEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
VPPVPAVLMGVITGCVGGIIRDVLAGRPSILMRPELYVTAAALSSGLCAAGAALGLAKGL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHCCHHHHHHHHHHHHHH
VWPVAAMAGFALRGAAIWWRLGLPTYSAEREG
HHHHHHHHHHHHHHHHHHHEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA