| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is crtZ [H]
Identifier: 87199190
GI number: 87199190
Start: 1209469
End: 1209999
Strand: Reverse
Name: crtZ [H]
Synonym: Saro_1168
Alternate gene names: 87199190
Gene position: 1209999-1209469 (Counterclockwise)
Preceding gene: 87199197
Following gene: 87199176
Centisome position: 33.97
GC content: 65.16
Gene sequence:
>531_bases ATGGGCGGGGCCATGCAGACGCTTGCCGCGATCCTCATTGTCCTGGGCACGGTCCTCGCGATGGAATTCGTCGCGTGGTC GAGCCACAAGTACATCATGCACGGCTTCGGCTGGGGCTGGCACCGCGACCATCATGAGCCGCACGAAGGGTTTCTCGAGA AGAACGATCTCTACGCCATTGTCGGCGCGGCGCTTTCGATCCTGATGTTCGCGCTGGGCAGCCCGATGATCATGGGCGCG GATGCCTGGTGGCCGGGCACGTGGATCGGCCTGGGCGTCCTGTTCTATGGCGTGATCTATACGCTGGTGCATGACGGGCT GGTCCACCAGCGCTGGTTCCGATGGGTCCCGAAGCGCGGCTATGCCAAGCGGCTGGTCCAGGCGCACAAGCTTCACCACG CCACGATCGGCAAGGAAGGCGGCGTCAGTTTCGGCTTCGTCTTCGCGCGCGACCCTGCGGTGCTGAAGCAGGAACTGCGG GCCCAGCGCGAGGCAGGCATCGCCGTTCTGCGCGAGGCAGTGGACGGCTAG
Upstream 100 bases:
>100_bases AGGCAAAACTGCCGTCCGGCGGCTGAACGCCAGCCAAACGACCCGTCGCGACTTTCGGGCAAATTGTAAGAAAGTGTCGC CCCGCAAACGGCCCCGGTGT
Downstream 100 bases:
>100_bases GCGGCGTTCGAGACGTTCTTACGCCAGTCTGATCTCGTTCAGCACGCCCTTCGCGAGGTTGCGGAAGCGCAAGGCGTCCG AAACGGATATGTCCTGATTG
Product: carotene hydroxylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MGGAMQTLAAILIVLGTVLAMEFVAWSSHKYIMHGFGWGWHRDHHEPHEGFLEKNDLYAIVGAALSILMFALGSPMIMGA DAWWPGTWIGLGVLFYGVIYTLVHDGLVHQRWFRWVPKRGYAKRLVQAHKLHHATIGKEGGVSFGFVFARDPAVLKQELR AQREAGIAVLREAVDG
Sequences:
>Translated_176_residues MGGAMQTLAAILIVLGTVLAMEFVAWSSHKYIMHGFGWGWHRDHHEPHEGFLEKNDLYAIVGAALSILMFALGSPMIMGA DAWWPGTWIGLGVLFYGVIYTLVHDGLVHQRWFRWVPKRGYAKRLVQAHKLHHATIGKEGGVSFGFVFARDPAVLKQELR AQREAGIAVLREAVDG >Mature_175_residues GGAMQTLAAILIVLGTVLAMEFVAWSSHKYIMHGFGWGWHRDHHEPHEGFLEKNDLYAIVGAALSILMFALGSPMIMGAD AWWPGTWIGLGVLFYGVIYTLVHDGLVHQRWFRWVPKRGYAKRLVQAHKLHHATIGKEGGVSFGFVFARDPAVLKQELRA QREAGIAVLREAVDG
Specific function: Catalyzes the hydroxylation reaction from beta-carotene to zeaxanthin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sterol desaturase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006694 [H]
Pfam domain/function: PF04116 FA_hydroxylase [H]
EC number: NA
Molecular weight: Translated: 19615; Mature: 19484
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGAMQTLAAILIVLGTVLAMEFVAWSSHKYIMHGFGWGWHRDHHEPHEGFLEKNDLYAI CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCHHCCCCCCHHHHH VGAALSILMFALGSPMIMGADAWWPGTWIGLGVLFYGVIYTLVHDGLVHQRWFRWVPKRG HHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH YAKRLVQAHKLHHATIGKEGGVSFGFVFARDPAVLKQELRAQREAGIAVLREAVDG HHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GGAMQTLAAILIVLGTVLAMEFVAWSSHKYIMHGFGWGWHRDHHEPHEGFLEKNDLYAI CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCHHCCCCCCHHHHH VGAALSILMFALGSPMIMGADAWWPGTWIGLGVLFYGVIYTLVHDGLVHQRWFRWVPKRG HHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH YAKRLVQAHKLHHATIGKEGGVSFGFVFARDPAVLKQELRAQREAGIAVLREAVDG HHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2254247 [H]