Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87199140

Identifier: 87199140

GI number: 87199140

Start: 1164233

End: 1164523

Strand: Reverse

Name: 87199140

Synonym: Saro_1118

Alternate gene names: NA

Gene position: 1164523-1164233 (Counterclockwise)

Preceding gene: 87199172

Following gene: 87199137

Centisome position: 32.7

GC content: 63.92

Gene sequence:

>291_bases
ATGACCGTAGCCCGCCTGACCGACGCAGAGCGCGACGCGCTTCTGGCCGAATTGCCCGAGTGGGCCCTGCGGGAAGACGG
CCTGGCCATCGTCCGCACGTTCCGCTTCGCGGACTTCTCCCAAGCATGGGGCTTCATGAACCGCGTCGCGCTTCATGCGG
AAAAGACCGATCACCATCCCGAATGGTTCAACGTCTACAACCGCGTCGAAGTTACGCTGACCACCCACGACGCGGACGGT
CTTTCCGCGCGCGACGCCGACATGGCGCGCGCGATGGAAAGCTTTCTCTAG

Upstream 100 bases:

>100_bases
GCAGGCAATATCCGTGGCGACGAGACCGCACTCTTGCATGGCGCGACGCGATAGGGGAAAGCGCAGGCCCTGCCAAGGAC
GCCGACGAAAAGGACATGCA

Downstream 100 bases:

>100_bases
GGCTATTTGCCCAAGGGACGCTCGGCCGAACGCATCTGTTTGCGGAGCGCGCCGGGCATCCACCGGGAGGCGAATGCAAG
CCGCCGCGCAGTCTTGCCGA

Product: pterin-4-alpha-carbinolamine dehydratase

Products: NA

Alternate protein names: PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; PCD

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MTVARLTDAERDALLAELPEWALREDGLAIVRTFRFADFSQAWGFMNRVALHAEKTDHHPEWFNVYNRVEVTLTTHDADG
LSARDADMARAMESFL

Sequences:

>Translated_96_residues
MTVARLTDAERDALLAELPEWALREDGLAIVRTFRFADFSQAWGFMNRVALHAEKTDHHPEWFNVYNRVEVTLTTHDADG
LSARDADMARAMESFL
>Mature_95_residues
TVARLTDAERDALLAELPEWALREDGLAIVRTFRFADFSQAWGFMNRVALHAEKTDHHPEWFNVYNRVEVTLTTHDADGL
SARDADMARAMESFL

Specific function: Unknown

COG id: COG2154

COG function: function code H; Pterin-4a-carbinolamine dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family

Homologues:

Organism=Homo sapiens, GI4557831, Length=92, Percent_Identity=54.3478260869565, Blast_Score=100, Evalue=4e-22,
Organism=Homo sapiens, GI134133240, Length=91, Percent_Identity=48.3516483516484, Blast_Score=95, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI115533705, Length=93, Percent_Identity=52.6881720430108, Blast_Score=102, Evalue=4e-23,
Organism=Drosophila melanogaster, GI45549100, Length=94, Percent_Identity=51.063829787234, Blast_Score=95, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PHS_NOVAD (Q2G9B0)

Other databases:

- EMBL:   CP000248
- RefSeq:   YP_496397.1
- ProteinModelPortal:   Q2G9B0
- SMR:   Q2G9B0
- STRING:   Q2G9B0
- GeneID:   3916414
- GenomeReviews:   CP000248_GR
- KEGG:   nar:Saro_1118
- eggNOG:   COG2154
- HOGENOM:   HBG705804
- OMA:   IALICEK
- PhylomeDB:   Q2G9B0
- BioCyc:   NARO279238:SARO_1118-MONOMER
- HAMAP:   MF_00434
- InterPro:   IPR001533
- Gene3D:   G3DSA:3.30.1360.20
- PANTHER:   PTHR12599

Pfam domain/function: PF01329 Pterin_4a; SSF55248 Trans_pterinDh

EC number: =4.2.1.96

Molecular weight: Translated: 11009; Mature: 10878

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVARLTDAERDALLAELPEWALREDGLAIVRTFRFADFSQAWGFMNRVALHAEKTDHHP
CCCCCCCCCHHHHHHHHCCHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCC
EWFNVYNRVEVTLTTHDADGLSARDADMARAMESFL
HHHHHCCEEEEEEEECCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
TVARLTDAERDALLAELPEWALREDGLAIVRTFRFADFSQAWGFMNRVALHAEKTDHHP
CCCCCCCCHHHHHHHHCCHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCC
EWFNVYNRVEVTLTTHDADGLSARDADMARAMESFL
HHHHHCCEEEEEEEECCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA