| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199127
Identifier: 87199127
GI number: 87199127
Start: 1152213
End: 1152503
Strand: Reverse
Name: 87199127
Synonym: Saro_1105
Alternate gene names: NA
Gene position: 1152503-1152213 (Counterclockwise)
Preceding gene: 87199129
Following gene: 87199126
Centisome position: 32.36
GC content: 60.48
Gene sequence:
>291_bases ATGGTTAGCAGCCGTTACGCGCGGCGAATTCTTCGTCAGGCAAACTTTCGTTCATCCACCGTCGCCGCCGGGCATCGTGG AACAAAGCCGAAGCCTCGCGAATTGAGAGCGCGCAGGGGCGGGAGGAGCCCTGGGAGACCGAATATGCTTCTGACCATTG CCCTCATTCTCTTCGTCCTTTGGGCGCTTGGAGTTTTCGCCTTCAAGGTGACCGCCGGCGTGATCCATCTGGTGCTCGTC GTCGCCCTGATCGTCGGCCTCGTCCATCTGTTCCGCGGCCGGAGAGTCTAA
Upstream 100 bases:
>100_bases CACCCCGCGCTCGCCGCGCCGGCTGTCTGCCGCGACCGGCGTTGCCGAATGAAGGGTCCCGTCCCCATGCAGTCGAGAGC TAGCAACCGGTTACGAAGAA
Downstream 100 bases:
>100_bases ATCGACGGCCCGCGATTAGACGGGTTGCGAAGTGAAACGCTATTGCCTAGCCTCTTGAAGGTCCGCTGCCGAACGCCAGC TTGTTCGGCGCCATGTCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MVSSRYARRILRQANFRSSTVAAGHRGTKPKPRELRARRGGRSPGRPNMLLTIALILFVLWALGVFAFKVTAGVIHLVLV VALIVGLVHLFRGRRV
Sequences:
>Translated_96_residues MVSSRYARRILRQANFRSSTVAAGHRGTKPKPRELRARRGGRSPGRPNMLLTIALILFVLWALGVFAFKVTAGVIHLVLV VALIVGLVHLFRGRRV >Mature_96_residues MVSSRYARRILRQANFRSSTVAAGHRGTKPKPRELRARRGGRSPGRPNMLLTIALILFVLWALGVFAFKVTAGVIHLVLV VALIVGLVHLFRGRRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10669; Mature: 10669
Theoretical pI: Translated: 13.10; Mature: 13.10
Prosite motif: PS00626 RCC1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSSRYARRILRQANFRSSTVAAGHRGTKPKPRELRARRGGRSPGRPNMLLTIALILFVL CCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHH WALGVFAFKVTAGVIHLVLVVALIVGLVHLFRGRRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVSSRYARRILRQANFRSSTVAAGHRGTKPKPRELRARRGGRSPGRPNMLLTIALILFVL CCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHH WALGVFAFKVTAGVIHLVLVVALIVGLVHLFRGRRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA