| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199016
Identifier: 87199016
GI number: 87199016
Start: 1036891
End: 1037967
Strand: Reverse
Name: 87199016
Synonym: Saro_0994
Alternate gene names: NA
Gene position: 1037967-1036891 (Counterclockwise)
Preceding gene: 87199017
Following gene: 87199015
Centisome position: 29.14
GC content: 64.62
Gene sequence:
>1077_bases ATGACGCAGGCTCCCATGGACGCGCAGACCGCCTTCACCGGCACGGTTGCACCCGAAGGCGCCGACAGGCTGGACGAAGC CAGTCTGACCCGCTGGTTCGAGACGAACGTGGCAGGCTTCCAGGGCCCGCTTGCCGTCTCGAAGTTCAAGGGCGGCCAGT CGAACCCGACCTACCGGATAGACAGTCCTTCGGGACCTTACGTCCTGAGGCGCAAGCCCTTCGGCAAACTGCTGCCCTCG GCCCATGCCGTGGACCGCGAATACAAGGTACAAGCCGGACTTTCCGGAAGCGGCTTTCCGGTGGCCCCGCAGTACGGCCT GTGCACCGACGATTCGGTTATCGGGTCGTGGTTCTACGTGATGGGCTGCGTCAACGGACGGACGATCTGGGACGGCGCGA TGCCGGGAGCGACGCCCGAATTTCGCCGCGCGACCTATGACGCGATGGTCGATACGCTCGCCGACCTGCATGCGGTCGAC GTCGAAAAGGCCGGACTGTCGGATTTCGGCAAGCCCGGTAACTACTTCGGCCGACAAGTCGATCGCTGGACCAAGCAGTA CCGGCTTTCAGAAACCGAAACGATGCCGGAGATGGAGCGGCTGATCGAGTGGCTGCCCGCCACCTTGCCGGAACAGACCC GCACCAGCGTGGTCCATGGCGACTACCGCATCGACAACATGATCTTCCACCCGACCGAAGCGCGCGTCATCGCGGTGCTG GACTGGGAACTGTCGACGCTGGGCGACCCTCTGGCGGACTTCACCTACCTATGCACGGCCTGGGTGCAGGACAATGGCGG CCGTTCCGGCGTCCAGGACCTCGACCGCAAGGCGCTGGGCATTCCCGAACTGGACCAAGTCGTCGCCCGGTATTGCGAGC GCACGGGCCGCGATGGGCTGCCCGATCTAGACTGGTACATGGCCTACAACTTCTTCCGCCTTGCCGGGATTATCCAGGGC ATCAAGAAGCGGGTCATCGACGGCACGGCGTCGAGCGCCCATGCCAAGGCCATGTCCGAACGCGTGCGCCCGCTGGCGGA ACTGGCGATGAGCTTTGCGGTGAAGGCCGGGGCCTGA
Upstream 100 bases:
>100_bases ACACGATCATTGCCGAACGCATCCCGCTCGAAGGGATCAACGATGGCTTCGAGAAGATGAAGCAGGGCCATTCCGCCCGC TCTGTCATCGTGTTCGACCA
Downstream 100 bases:
>100_bases GCGCCCGGCCCGCCTTCAGCGAACGAAATGGATGCCGTGCTCTTCCCCGATCAGGGAGACGCGCGGCAGGTCCTCCTCGC CCTTGACCCGGGCATCGACG
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: Phosphotransferase; Phosphotransferase Family Protein; Phosphotransferase Family Protein; Acyl-CoA Dehydrogenase; Phosphotransferase Family; Acyl-Co A Dehydrogenase; Acyl-CoA Dehydrogenase FadE; Tyrosine Protein Kinase/Aminoglycoside Phosphotransferase; Acyl-Coa Dehydrogenase Fade; Acyl-CoA Dehydrogenase Family Member
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MTQAPMDAQTAFTGTVAPEGADRLDEASLTRWFETNVAGFQGPLAVSKFKGGQSNPTYRIDSPSGPYVLRRKPFGKLLPS AHAVDREYKVQAGLSGSGFPVAPQYGLCTDDSVIGSWFYVMGCVNGRTIWDGAMPGATPEFRRATYDAMVDTLADLHAVD VEKAGLSDFGKPGNYFGRQVDRWTKQYRLSETETMPEMERLIEWLPATLPEQTRTSVVHGDYRIDNMIFHPTEARVIAVL DWELSTLGDPLADFTYLCTAWVQDNGGRSGVQDLDRKALGIPELDQVVARYCERTGRDGLPDLDWYMAYNFFRLAGIIQG IKKRVIDGTASSAHAKAMSERVRPLAELAMSFAVKAGA
Sequences:
>Translated_358_residues MTQAPMDAQTAFTGTVAPEGADRLDEASLTRWFETNVAGFQGPLAVSKFKGGQSNPTYRIDSPSGPYVLRRKPFGKLLPS AHAVDREYKVQAGLSGSGFPVAPQYGLCTDDSVIGSWFYVMGCVNGRTIWDGAMPGATPEFRRATYDAMVDTLADLHAVD VEKAGLSDFGKPGNYFGRQVDRWTKQYRLSETETMPEMERLIEWLPATLPEQTRTSVVHGDYRIDNMIFHPTEARVIAVL DWELSTLGDPLADFTYLCTAWVQDNGGRSGVQDLDRKALGIPELDQVVARYCERTGRDGLPDLDWYMAYNFFRLAGIIQG IKKRVIDGTASSAHAKAMSERVRPLAELAMSFAVKAGA >Mature_357_residues TQAPMDAQTAFTGTVAPEGADRLDEASLTRWFETNVAGFQGPLAVSKFKGGQSNPTYRIDSPSGPYVLRRKPFGKLLPSA HAVDREYKVQAGLSGSGFPVAPQYGLCTDDSVIGSWFYVMGCVNGRTIWDGAMPGATPEFRRATYDAMVDTLADLHAVDV EKAGLSDFGKPGNYFGRQVDRWTKQYRLSETETMPEMERLIEWLPATLPEQTRTSVVHGDYRIDNMIFHPTEARVIAVLD WELSTLGDPLADFTYLCTAWVQDNGGRSGVQDLDRKALGIPELDQVVARYCERTGRDGLPDLDWYMAYNFFRLAGIIQGI KKRVIDGTASSAHAKAMSERVRPLAELAMSFAVKAGA
Specific function: Unknown
COG id: COG3173
COG function: function code R; Predicted aminoglycoside phosphotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI48976061, Length=334, Percent_Identity=48.2035928143713, Blast_Score=316, Evalue=3e-86, Organism=Homo sapiens, GI211971008, Length=334, Percent_Identity=48.2035928143713, Blast_Score=316, Evalue=3e-86, Organism=Homo sapiens, GI38505218, Length=337, Percent_Identity=38.8724035608309, Blast_Score=265, Evalue=4e-71, Organism=Caenorhabditis elegans, GI17562446, Length=321, Percent_Identity=40.1869158878505, Blast_Score=234, Evalue=7e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39483; Mature: 39352
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: PS00109 PROTEIN_KINASE_TYR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQAPMDAQTAFTGTVAPEGADRLDEASLTRWFETNVAGFQGPLAVSKFKGGQSNPTYRI CCCCCCCCHHCEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCEEE DSPSGPYVLRRKPFGKLLPSAHAVDREYKVQAGLSGSGFPVAPQYGLCTDDSVIGSWFYV CCCCCCEEEEECCHHHHCCCHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH MGCVNGRTIWDGAMPGATPEFRRATYDAMVDTLADLHAVDVEKAGLSDFGKPGNYFGRQV HHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHH DRWTKQYRLSETETMPEMERLIEWLPATLPEQTRTSVVHGDYRIDNMIFHPTEARVIAVL HHHHHHHHCCHHHCHHHHHHHHHHHCCCCCHHHHHHEEECCEEECCEEECCCCCEEEEEE DWELSTLGDPLADFTYLCTAWVQDNGGRSGVQDLDRKALGIPELDQVVARYCERTGRDGL ECCHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC PDLDWYMAYNFFRLAGIIQGIKKRVIDGTASSAHAKAMSERVRPLAELAMSFAVKAGA CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TQAPMDAQTAFTGTVAPEGADRLDEASLTRWFETNVAGFQGPLAVSKFKGGQSNPTYRI CCCCCCCHHCEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCEEE DSPSGPYVLRRKPFGKLLPSAHAVDREYKVQAGLSGSGFPVAPQYGLCTDDSVIGSWFYV CCCCCCEEEEECCHHHHCCCHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH MGCVNGRTIWDGAMPGATPEFRRATYDAMVDTLADLHAVDVEKAGLSDFGKPGNYFGRQV HHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHH DRWTKQYRLSETETMPEMERLIEWLPATLPEQTRTSVVHGDYRIDNMIFHPTEARVIAVL HHHHHHHHCCHHHCHHHHHHHHHHHCCCCCHHHHHHEEECCEEECCEEECCCCCEEEEEE DWELSTLGDPLADFTYLCTAWVQDNGGRSGVQDLDRKALGIPELDQVVARYCERTGRDGL ECCHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC PDLDWYMAYNFFRLAGIIQGIKKRVIDGTASSAHAKAMSERVRPLAELAMSFAVKAGA CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA