| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is nadE
Identifier: 87198992
GI number: 87198992
Start: 1015433
End: 1017154
Strand: Reverse
Name: nadE
Synonym: Saro_0970
Alternate gene names: 87198992
Gene position: 1017154-1015433 (Counterclockwise)
Preceding gene: 87198994
Following gene: 87198991
Centisome position: 28.56
GC content: 65.33
Gene sequence:
>1722_bases ATGACAGGTTTGCAACTCTTGCGGTGGTCGGGCGTTGAAGCCTACGTAACGCTCATGGTCGATACGCTCAGGATAACCCT CGCCCAGCTCAACCAGTCGGTTGGCGATCTTGCCGCCAATGTCGCGGCCATGCTCGCCGTGCGCGAAAGGGCGCGGGACG CCGATCTCATCGTTTTCCCCGAACTGCAACTCATCGGCTACCCGCCGGAAGACCTGATCATGAAGCCCGCGCTGGTCGAA CGCGCGACGGCGGAACTCGAAAAGCTGGCCAGGGTCACGGCCGACGGGGGGCCAGCGATGCTCGTCGGCTCGGTCTTCGT GCGCGACGGCGCCCTTCACAATGGCGTCGCGCTGCTCGAGGGCGGCCGCGTCGCCGCCACCCGCTTCAAGTACGAGCTGC CCAACTACGGCACTTTCGACGAGAAGCGCTATTTCCTGCCCGGCCCCCTGCCGGAACCCGTGTTGTTCAAGGGCGCGATG CTCGGCCTGCCGATCTGCGAGGACATCTGGCACCCCGACGTTTGCCGCCACCTGGCCGAACTGGGCGCGGAAATCTTCAT CTGCATCAACGGCAGCCCTTACGAGATCGACAAGGACGTGCTGCGCATCGACGGCGTGGCCAAGCGCCGCGCGATCGATA CCGGCATCCCGCTTGCCTATGTCAACCGCGTCGGCGGCCAGGACGAGATCGTGTTCGACGGGGCCAGCTTCGTCGTCGGG CCGGAAGGGGCTGTCTGGGTGCAGATGCCTGATTGGGAAGAATCGGTCGTCACGACCGTGTGGCACCGCAGCGATTTCGG CGATGCCAACCGCTGGCGGTGCGAGGCCGGCGAAGTCCACGAACTCGCGGAGCATCCCGAGGACATCTACTGCGCCATGG TCATGGCCCTGCGCGACTATGTGAACAAGAACCGCTTCCCCGGTGTGGTCCTCGGCCTCTCGGGCGGCATCGATTCCGCC ATTTGCGCCGCCATCGCGGTCGACGCGCTTGGCCCTGATCGCGTGTGGTGCGTGATGCTGCCCAGCCGCTACACCTCGCA GGAAAGCCTGGATGATGCGGCAGGCTGTGCCCGGATGCTCGGCGTGCGCCTCGATACCGTTCCGATCGGCCCCGCCGTGG ACGCGTTCGACGGCATGCTCGCTCCCGTCTTTGCCGGCCGGCAGCCTGACCTCACCGAAGAGAACATCCAGTCGCGCATC CGCGGCGTCACGCTCATGGCGCTGTCCAACAAGTTCGGCCCGATGCTCGTCACGACCGGCAACAAGAGCGAGATGAGCGT CGGCTACGCCACGATCTACGGCGATATGAACGGCGGCTACAATCCCCTCAAGGACGCCTACAAGACCACCGTCTTCGCGG TGTCGGAGTGGCGCAACTCCCATCGGCCGAAGATCGGGCTCGGCCCCGACGGTCCGGTCATGCCGCAGCGGATCATCACA AAGCCGCCCAGCGCCGAACTGCGCCCCGACCAGAAGGATTCGGATTCGCTCCCGCCCTACGACGTGCTCGACGCAATTCT GCAGGGCCTGGTCGAGAACGAGAAGAGCGTGGACCAGATCGTTGCCGAAGGGTTCGAGCGCGATACCGTCGCGCGCATCG AACGCCTGCTGAACCTTGCCGAATACAAGCGGCGCCAGGCTCCTCCCGGCGTAAAGCTGGGCGCCCGCAACTACGGGCGC GACCGGCGCTATCCCATCACCCACGGTTTCAGGACAGGTTGA
Upstream 100 bases:
>100_bases GGCCGAAATGGCGCGGGCGAGCGGCAGATTGGAGTTGCCGGCCATGATCTTCATGCGTGCGATTCCCTCGGATTCGATCC CCTGCGGCCCTTAGCCCAAG
Downstream 100 bases:
>100_bases ACAATGCGGCAGGCGTCGAGGTTGAAGGGCGGGGGCTATCTCACATCCACGATCAGCGTGGTTCTTCTGGGGATACCCGC CCTCAAGTCGGCGCAGGACG
Product: NAD synthetase
Products: NA
Alternate protein names: NAD(+) synthase [glutamine-hydrolyzing] [H]
Number of amino acids: Translated: 573; Mature: 572
Protein sequence:
>573_residues MTGLQLLRWSGVEAYVTLMVDTLRITLAQLNQSVGDLAANVAAMLAVRERARDADLIVFPELQLIGYPPEDLIMKPALVE RATAELEKLARVTADGGPAMLVGSVFVRDGALHNGVALLEGGRVAATRFKYELPNYGTFDEKRYFLPGPLPEPVLFKGAM LGLPICEDIWHPDVCRHLAELGAEIFICINGSPYEIDKDVLRIDGVAKRRAIDTGIPLAYVNRVGGQDEIVFDGASFVVG PEGAVWVQMPDWEESVVTTVWHRSDFGDANRWRCEAGEVHELAEHPEDIYCAMVMALRDYVNKNRFPGVVLGLSGGIDSA ICAAIAVDALGPDRVWCVMLPSRYTSQESLDDAAGCARMLGVRLDTVPIGPAVDAFDGMLAPVFAGRQPDLTEENIQSRI RGVTLMALSNKFGPMLVTTGNKSEMSVGYATIYGDMNGGYNPLKDAYKTTVFAVSEWRNSHRPKIGLGPDGPVMPQRIIT KPPSAELRPDQKDSDSLPPYDVLDAILQGLVENEKSVDQIVAEGFERDTVARIERLLNLAEYKRRQAPPGVKLGARNYGR DRRYPITHGFRTG
Sequences:
>Translated_573_residues MTGLQLLRWSGVEAYVTLMVDTLRITLAQLNQSVGDLAANVAAMLAVRERARDADLIVFPELQLIGYPPEDLIMKPALVE RATAELEKLARVTADGGPAMLVGSVFVRDGALHNGVALLEGGRVAATRFKYELPNYGTFDEKRYFLPGPLPEPVLFKGAM LGLPICEDIWHPDVCRHLAELGAEIFICINGSPYEIDKDVLRIDGVAKRRAIDTGIPLAYVNRVGGQDEIVFDGASFVVG PEGAVWVQMPDWEESVVTTVWHRSDFGDANRWRCEAGEVHELAEHPEDIYCAMVMALRDYVNKNRFPGVVLGLSGGIDSA ICAAIAVDALGPDRVWCVMLPSRYTSQESLDDAAGCARMLGVRLDTVPIGPAVDAFDGMLAPVFAGRQPDLTEENIQSRI RGVTLMALSNKFGPMLVTTGNKSEMSVGYATIYGDMNGGYNPLKDAYKTTVFAVSEWRNSHRPKIGLGPDGPVMPQRIIT KPPSAELRPDQKDSDSLPPYDVLDAILQGLVENEKSVDQIVAEGFERDTVARIERLLNLAEYKRRQAPPGVKLGARNYGR DRRYPITHGFRTG >Mature_572_residues TGLQLLRWSGVEAYVTLMVDTLRITLAQLNQSVGDLAANVAAMLAVRERARDADLIVFPELQLIGYPPEDLIMKPALVER ATAELEKLARVTADGGPAMLVGSVFVRDGALHNGVALLEGGRVAATRFKYELPNYGTFDEKRYFLPGPLPEPVLFKGAML GLPICEDIWHPDVCRHLAELGAEIFICINGSPYEIDKDVLRIDGVAKRRAIDTGIPLAYVNRVGGQDEIVFDGASFVVGP EGAVWVQMPDWEESVVTTVWHRSDFGDANRWRCEAGEVHELAEHPEDIYCAMVMALRDYVNKNRFPGVVLGLSGGIDSAI CAAIAVDALGPDRVWCVMLPSRYTSQESLDDAAGCARMLGVRLDTVPIGPAVDAFDGMLAPVFAGRQPDLTEENIQSRIR GVTLMALSNKFGPMLVTTGNKSEMSVGYATIYGDMNGGYNPLKDAYKTTVFAVSEWRNSHRPKIGLGPDGPVMPQRIITK PPSAELRPDQKDSDSLPPYDVLDAILQGLVENEKSVDQIVAEGFERDTVARIERLLNLAEYKRRQAPPGVKLGARNYGRD RRYPITHGFRTG
Specific function: It is not known if this NAD synthase uses NH(3) or glutamine as the N donor [H]
COG id: COG0171
COG function: function code H; NAD synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014445 - InterPro: IPR022310 - InterPro: IPR003694 - InterPro: IPR003010 - InterPro: IPR014729 [H]
Pfam domain/function: PF00795 CN_hydrolase; PF02540 NAD_synthase [H]
EC number: =6.3.5.1 [H]
Molecular weight: Translated: 62808; Mature: 62677
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGLQLLRWSGVEAYVTLMVDTLRITLAQLNQSVGDLAANVAAMLAVRERARDADLIVFP CCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC ELQLIGYPPEDLIMKPALVERATAELEKLARVTADGGPAMLVGSVFVRDGALHNGVALLE CEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHCCCCCCCCEEEEE GGRVAATRFKYELPNYGTFDEKRYFLPGPLPEPVLFKGAMLGLPICEDIWHPDVCRHLAE CCEEEEEEEEEECCCCCCCCCCCEECCCCCCCCHHHCCHHHCCCHHHHCCCHHHHHHHHH LGAEIFICINGSPYEIDKDVLRIDGVAKRRAIDTGIPLAYVNRVGGQDEIVFDGASFVVG CCCEEEEEECCCCCCCCHHHHHHCCHHHHHHHCCCCCHHHHHHCCCCCEEEECCCEEEEC PEGAVWVQMPDWEESVVTTVWHRSDFGDANRWRCEAGEVHELAEHPEDIYCAMVMALRDY CCCEEEEECCCCHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHCCCHHHHHHHHHHHHHH VNKNRFPGVVLGLSGGIDSAICAAIAVDALGPDRVWCVMLPSRYTSQESLDDAAGCARML HCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH GVRLDTVPIGPAVDAFDGMLAPVFAGRQPDLTEENIQSRIRGVTLMALSNKFGPMLVTTG CCEEECCCCCCCHHHHCCHHHHHHCCCCCCCCHHHHHHHHCCEEEEEECCCCCCEEEECC NKSEMSVGYATIYGDMNGGYNPLKDAYKTTVFAVSEWRNSHRPKIGLGPDGPVMPQRIIT CCCCCEEEEEEEEECCCCCCCHHHHHHHHHHEEHHHHHHCCCCEECCCCCCCCCCHHHHC KPPSAELRPDQKDSDSLPPYDVLDAILQGLVENEKSVDQIVAEGFERDTVARIERLLNLA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHH EYKRRQAPPGVKLGARNYGRDRRYPITHGFRTG HHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TGLQLLRWSGVEAYVTLMVDTLRITLAQLNQSVGDLAANVAAMLAVRERARDADLIVFP CCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC ELQLIGYPPEDLIMKPALVERATAELEKLARVTADGGPAMLVGSVFVRDGALHNGVALLE CEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHCCCCCCCCEEEEE GGRVAATRFKYELPNYGTFDEKRYFLPGPLPEPVLFKGAMLGLPICEDIWHPDVCRHLAE CCEEEEEEEEEECCCCCCCCCCCEECCCCCCCCHHHCCHHHCCCHHHHCCCHHHHHHHHH LGAEIFICINGSPYEIDKDVLRIDGVAKRRAIDTGIPLAYVNRVGGQDEIVFDGASFVVG CCCEEEEEECCCCCCCCHHHHHHCCHHHHHHHCCCCCHHHHHHCCCCCEEEECCCEEEEC PEGAVWVQMPDWEESVVTTVWHRSDFGDANRWRCEAGEVHELAEHPEDIYCAMVMALRDY CCCEEEEECCCCHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHCCCHHHHHHHHHHHHHH VNKNRFPGVVLGLSGGIDSAICAAIAVDALGPDRVWCVMLPSRYTSQESLDDAAGCARML HCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH GVRLDTVPIGPAVDAFDGMLAPVFAGRQPDLTEENIQSRIRGVTLMALSNKFGPMLVTTG CCEEECCCCCCCHHHHCCHHHHHHCCCCCCCCHHHHHHHHCCEEEEEECCCCCCEEEECC NKSEMSVGYATIYGDMNGGYNPLKDAYKTTVFAVSEWRNSHRPKIGLGPDGPVMPQRIIT CCCCCEEEEEEEEECCCCCCCHHHHHHHHHHEEHHHHHHCCCCEECCCCCCCCCCHHHHC KPPSAELRPDQKDSDSLPPYDVLDAILQGLVENEKSVDQIVAEGFERDTVARIERLLNLA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHH EYKRRQAPPGVKLGARNYGRDRRYPITHGFRTG HHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8431308; 8195100 [H]