Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is yfeW [C]

Identifier: 87198892

GI number: 87198892

Start: 924792

End: 926024

Strand: Reverse

Name: yfeW [C]

Synonym: Saro_0870

Alternate gene names: 87198892

Gene position: 926024-924792 (Counterclockwise)

Preceding gene: 87198893

Following gene: 87198891

Centisome position: 26.0

GC content: 65.04

Gene sequence:

>1233_bases
ATGGACCTTGCCGACCCGCAGACGCTCGGTTTCGATGCGTCCCGGCTGGAGCGCATCGCCGCATTCCTGGACGAGCAGTA
TGTCGACAGCGGACGCCTGCCCGGGCTCGACGTTCTGGTCGCGCGCGATGGCGATGCGGTCTATCGCCACACCAGCGGAC
GTGCGCGCGAGGATGGTACGCCGATGGCGCCGGACACGATCCATCGCATCGCCTCGATGACCAAGCCGCTGACGTCGGTG
GCATTCATGATGCTGGTCGAGGAAGGCAAGGTCGCGCTCGACGACCCGGTGACCAAGGTCATCCCGGAGTTCGCGAACCT
TGGCGTCTATGCCGGCGGCGGCGGAGAAGTGGACTTCTTTCCTTCGCGCCCCGCAGCGACCATGCGCATGGTCGACGTGA
TCAGCCATCAATCCGGCCTGACCTATGGCATCCAGAACCGGACCAACGTGGATGCCGCCTATCGCAAGGCACGCCTCGAC
GGCCACGCGAGCCTGCCGGGCAACGACCATTTCATCGAGGAACTGGCCAGGCTGCCGCTGGAGTTCGAACCGGGTCAGGG
CTGGAACTATTCGGTCGGCACCGACGTGCTGGGCGTGATCGTTGCGCGGCTTTCGGGGATGAGCCTTGGCGAGTTCCTGA
AGAGCCGCATTCTCGATCCGCTAGGCATGGTGGATACCGCCTTCCATTGCCCCGACGATAAGGCGCACCGGCTAGCCGAC
GCCTGGGCGTACAAGGCCGGCGAGCGGCCGCAGCTTTTCGATCCTGCCGAGAAGTCCGGCACCCGGCGCGTGCCGCGCTT
CGAGAGCGGCGGTGGCGGGCTGCTGTCGACGACCAGCGACTACCACCGCTTCTGCCGGATGCTGGTGAACGGCGGCAGCG
CCGACGGTGCGCGCATCCTGAGCCCGAAGACCATTCATTTGATGACAGCCAACCACCTGCCGAACGGGGCCGACCTCACG
CAGGTTTCGCGCGCGCTGTTCAGCGAAGCCTACAATGCGGGCGCGGGCTTCGGCCTTGGCTTCGGCATGACGATCGACCC
GGCGCGGGCGCTGGTGCCGGGGTCCGCAGGCGAGTTCTACTGGGGTGGAATATTCTCAACCGCGTTTTTCGTGGACCCGG
TGGAAAAGGTCCATGCGGTTTTCATGACCCAGCTCTATCCCTCGTTCATCTATCCCATCCGGCGTCAGTTGAAGACGCTG
ATCTACAGCGCGCTGACGGAAAGCCGCGCCTGA

Upstream 100 bases:

>100_bases
GGTTTCAGCAGCGAGACGCTGCGGATGTGGAACGCCGATGGCGTGGAAGTGATGCGCGGGCTCCAGAGCGTCGCGATCTT
TGGCTGACGGAGAGATAGAG

Downstream 100 bases:

>100_bases
CAACTGCCTAGGAGAAACGACGATGTCCGACCCCATTCCCGGCGCCAAGGAGCACATCGACGCGGCGCGCAAGCTTGCCG
CGACCATCGATGACATCCCG

Product: beta-lactamase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MDLADPQTLGFDASRLERIAAFLDEQYVDSGRLPGLDVLVARDGDAVYRHTSGRAREDGTPMAPDTIHRIASMTKPLTSV
AFMMLVEEGKVALDDPVTKVIPEFANLGVYAGGGGEVDFFPSRPAATMRMVDVISHQSGLTYGIQNRTNVDAAYRKARLD
GHASLPGNDHFIEELARLPLEFEPGQGWNYSVGTDVLGVIVARLSGMSLGEFLKSRILDPLGMVDTAFHCPDDKAHRLAD
AWAYKAGERPQLFDPAEKSGTRRVPRFESGGGGLLSTTSDYHRFCRMLVNGGSADGARILSPKTIHLMTANHLPNGADLT
QVSRALFSEAYNAGAGFGLGFGMTIDPARALVPGSAGEFYWGGIFSTAFFVDPVEKVHAVFMTQLYPSFIYPIRRQLKTL
IYSALTESRA

Sequences:

>Translated_410_residues
MDLADPQTLGFDASRLERIAAFLDEQYVDSGRLPGLDVLVARDGDAVYRHTSGRAREDGTPMAPDTIHRIASMTKPLTSV
AFMMLVEEGKVALDDPVTKVIPEFANLGVYAGGGGEVDFFPSRPAATMRMVDVISHQSGLTYGIQNRTNVDAAYRKARLD
GHASLPGNDHFIEELARLPLEFEPGQGWNYSVGTDVLGVIVARLSGMSLGEFLKSRILDPLGMVDTAFHCPDDKAHRLAD
AWAYKAGERPQLFDPAEKSGTRRVPRFESGGGGLLSTTSDYHRFCRMLVNGGSADGARILSPKTIHLMTANHLPNGADLT
QVSRALFSEAYNAGAGFGLGFGMTIDPARALVPGSAGEFYWGGIFSTAFFVDPVEKVHAVFMTQLYPSFIYPIRRQLKTL
IYSALTESRA
>Mature_410_residues
MDLADPQTLGFDASRLERIAAFLDEQYVDSGRLPGLDVLVARDGDAVYRHTSGRAREDGTPMAPDTIHRIASMTKPLTSV
AFMMLVEEGKVALDDPVTKVIPEFANLGVYAGGGGEVDFFPSRPAATMRMVDVISHQSGLTYGIQNRTNVDAAYRKARLD
GHASLPGNDHFIEELARLPLEFEPGQGWNYSVGTDVLGVIVARLSGMSLGEFLKSRILDPLGMVDTAFHCPDDKAHRLAD
AWAYKAGERPQLFDPAEKSGTRRVPRFESGGGGLLSTTSDYHRFCRMLVNGGSADGARILSPKTIHLMTANHLPNGADLT
QVSRALFSEAYNAGAGFGLGFGMTIDPARALVPGSAGEFYWGGIFSTAFFVDPVEKVHAVFMTQLYPSFIYPIRRQLKTL
IYSALTESRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082101, Length=422, Percent_Identity=24.4075829383886, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: NA

Molecular weight: Translated: 44540; Mature: 44540

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLADPQTLGFDASRLERIAAFLDEQYVDSGRLPGLDVLVARDGDAVYRHTSGRAREDGT
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEECCCCCCCCCC
PMAPDTIHRIASMTKPLTSVAFMMLVEEGKVALDDPVTKVIPEFANLGVYAGGGGEVDFF
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHCCEEECCCCCCCCC
PSRPAATMRMVDVISHQSGLTYGIQNRTNVDAAYRKARLDGHASLPGNDHFIEELARLPL
CCCCHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC
EFEPGQGWNYSVGTDVLGVIVARLSGMSLGEFLKSRILDPLGMVDTAFHCPDDKAHRLAD
EECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHH
AWAYKAGERPQLFDPAEKSGTRRVPRFESGGGGLLSTTSDYHRFCRMLVNGGSADGARIL
HHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEC
SPKTIHLMTANHLPNGADLTQVSRALFSEAYNAGAGFGLGFGMTIDPARALVPGSAGEFY
CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEECCHHHHCCCCCCCCE
WGGIFSTAFFVDPVEKVHAVFMTQLYPSFIYPIRRQLKTLIYSALTESRA
EHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDLADPQTLGFDASRLERIAAFLDEQYVDSGRLPGLDVLVARDGDAVYRHTSGRAREDGT
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEECCCCCCCCCC
PMAPDTIHRIASMTKPLTSVAFMMLVEEGKVALDDPVTKVIPEFANLGVYAGGGGEVDFF
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHCCEEECCCCCCCCC
PSRPAATMRMVDVISHQSGLTYGIQNRTNVDAAYRKARLDGHASLPGNDHFIEELARLPL
CCCCHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC
EFEPGQGWNYSVGTDVLGVIVARLSGMSLGEFLKSRILDPLGMVDTAFHCPDDKAHRLAD
EECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHH
AWAYKAGERPQLFDPAEKSGTRRVPRFESGGGGLLSTTSDYHRFCRMLVNGGSADGARIL
HHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEC
SPKTIHLMTANHLPNGADLTQVSRALFSEAYNAGAGFGLGFGMTIDPARALVPGSAGEFY
CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEECCHHHHCCCCCCCCE
WGGIFSTAFFVDPVEKVHAVFMTQLYPSFIYPIRRQLKTLIYSALTESRA
EHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]