| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is cinA [C]
Identifier: 87198861
GI number: 87198861
Start: 888663
End: 889424
Strand: Reverse
Name: cinA [C]
Synonym: Saro_0839
Alternate gene names: 87198861
Gene position: 889424-888663 (Counterclockwise)
Preceding gene: 87198862
Following gene: 87198860
Centisome position: 24.97
GC content: 66.8
Gene sequence:
>762_bases ATGACCGACGAATCCCGCATATGGACCGCCGCCCTCGTCGTCGTGGGCGACGAGATCCTTTCAGGCCGCACGCAGGACAA GAACATCGCGCAAGTCGCGACCTGGCTTGGCGTGCAGGGCATCCGCCTGCGCGAGGTGCGCGTCGTCCCGGACGACATGG ACGCCATCGTAGAGGCAGTGAACACGCTGCGCGCCCGCAACGACTACCTTTTCACGACCGGCGGGATCGGCCCGACGCAC GACGACATCACGGTCGACGCGGTGGCCTCAGCGCTCGGCGTCGAAGTCGTGATCCATCCCAAGGCGCGCGCCATTCTCGA CAGCTACTACGCCTCGCGCGGGGGGCTTAACGAAGCCCGTCTGCGCATGGCCCGCGTGCCGGATGGCGCCGACCTCATCG AGAACCGCGTATCGGGTGCGCCGGGCATCCGCGTCGGCAACGTCTTCCTGATGGCGGGTGTCCCCGGCATCACCGCGCAG ATGCTCGACGGATTGACCGGCCAGCTCGAAGGCGGCCTGCCCCTTCTCTCGACCACGGTCGGCTGCTGGGTCGCGGAAAG CGAGATCGCAGACCTGCTGCGCGAAACCGAGCTGGCCTTCGACGGATGCCAGATCGGCAGTTATCCCTTCTTTCGCGAAG GCAAGACCGGCGCGAACTTCGTGATCCGCTCGGTCAGCGAAGACCAGCTCCGCGCGTGCGCCTTTGCTCTCGAACAGGGC CTGGCCGACATGGGCCGTTTTCCGATCCCCGGGGGCATCTGA
Upstream 100 bases:
>100_bases CAGTTCGGCCATGCCCGGCCGGCCATGCAGGCCGACCCACAGATGGAAGCGGCGGAATAGCGCTTTTGCGCGCCAGACGG TTCGGTTATCCCATGATCCG
Downstream 100 bases:
>100_bases TCCGCCCGGTTTCCTCTGACACACCGGTCTCCTCTGATGCAAAGGCCTGACATGAAGCCAATCGCGGCCGCGTTCCTGCT TGCCCCCATGATCGCGGCGC
Product: molybdopterin binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MTDESRIWTAALVVVGDEILSGRTQDKNIAQVATWLGVQGIRLREVRVVPDDMDAIVEAVNTLRARNDYLFTTGGIGPTH DDITVDAVASALGVEVVIHPKARAILDSYYASRGGLNEARLRMARVPDGADLIENRVSGAPGIRVGNVFLMAGVPGITAQ MLDGLTGQLEGGLPLLSTTVGCWVAESEIADLLRETELAFDGCQIGSYPFFREGKTGANFVIRSVSEDQLRACAFALEQG LADMGRFPIPGGI
Sequences:
>Translated_253_residues MTDESRIWTAALVVVGDEILSGRTQDKNIAQVATWLGVQGIRLREVRVVPDDMDAIVEAVNTLRARNDYLFTTGGIGPTH DDITVDAVASALGVEVVIHPKARAILDSYYASRGGLNEARLRMARVPDGADLIENRVSGAPGIRVGNVFLMAGVPGITAQ MLDGLTGQLEGGLPLLSTTVGCWVAESEIADLLRETELAFDGCQIGSYPFFREGKTGANFVIRSVSEDQLRACAFALEQG LADMGRFPIPGGI >Mature_252_residues TDESRIWTAALVVVGDEILSGRTQDKNIAQVATWLGVQGIRLREVRVVPDDMDAIVEAVNTLRARNDYLFTTGGIGPTHD DITVDAVASALGVEVVIHPKARAILDSYYASRGGLNEARLRMARVPDGADLIENRVSGAPGIRVGNVFLMAGVPGITAQM LDGLTGQLEGGLPLLSTTVGCWVAESEIADLLRETELAFDGCQIGSYPFFREGKTGANFVIRSVSEDQLRACAFALEQGL ADMGRFPIPGGI
Specific function: Unknown
COG id: COG1058
COG function: function code R; Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CinA family [H]
Homologues:
Organism=Homo sapiens, GI296434309, Length=234, Percent_Identity=32.9059829059829, Blast_Score=113, Evalue=1e-25, Organism=Homo sapiens, GI41872403, Length=234, Percent_Identity=32.9059829059829, Blast_Score=113, Evalue=2e-25, Organism=Homo sapiens, GI41872389, Length=231, Percent_Identity=32.9004329004329, Blast_Score=113, Evalue=2e-25, Organism=Homo sapiens, GI296434312, Length=218, Percent_Identity=31.1926605504587, Blast_Score=96, Evalue=3e-20, Organism=Escherichia coli, GI1788583, Length=152, Percent_Identity=31.5789473684211, Blast_Score=77, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71993966, Length=259, Percent_Identity=30.1158301158301, Blast_Score=100, Evalue=7e-22, Organism=Caenorhabditis elegans, GI71993974, Length=259, Percent_Identity=30.1158301158301, Blast_Score=100, Evalue=8e-22, Organism=Saccharomyces cerevisiae, GI6323832, Length=222, Percent_Identity=27.9279279279279, Blast_Score=99, Evalue=7e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001453 - InterPro: IPR023055 [H]
Pfam domain/function: PF00994 MoCF_biosynth [H]
EC number: NA
Molecular weight: Translated: 27000; Mature: 26869
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDESRIWTAALVVVGDEILSGRTQDKNIAQVATWLGVQGIRLREVRVVPDDMDAIVEAV CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHH NTLRARNDYLFTTGGIGPTHDDITVDAVASALGVEVVIHPKARAILDSYYASRGGLNEAR HHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHCEEEEECCHHHHHHHHHHHHCCCCCHHH LRMARVPDGADLIENRVSGAPGIRVGNVFLMAGVPGITAQMLDGLTGQLEGGLPLLSTTV HHHHCCCCCHHHHHHHCCCCCCEEECCEEEEECCCCHHHHHHCCCCCCCCCCCCHHHHHH GCWVAESEIADLLRETELAFDGCQIGSYPFFREGKTGANFVIRSVSEDQLRACAFALEQG HHEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHEEECCCHHHHHHHHHHHHHH LADMGRFPIPGGI HHHHCCCCCCCCC >Mature Secondary Structure TDESRIWTAALVVVGDEILSGRTQDKNIAQVATWLGVQGIRLREVRVVPDDMDAIVEAV CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHH NTLRARNDYLFTTGGIGPTHDDITVDAVASALGVEVVIHPKARAILDSYYASRGGLNEAR HHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHCEEEEECCHHHHHHHHHHHHCCCCCHHH LRMARVPDGADLIENRVSGAPGIRVGNVFLMAGVPGITAQMLDGLTGQLEGGLPLLSTTV HHHHCCCCCHHHHHHHCCCCCCEEECCEEEEECCCCHHHHHHCCCCCCCCCCCCHHHHHH GCWVAESEIADLLRETELAFDGCQIGSYPFFREGKTGANFVIRSVSEDQLRACAFALEQG HHEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHEEECCCHHHHHHHHHHHHHH LADMGRFPIPGGI HHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10382966 [H]