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The map label for this gene is lipA [H]

Identifier: 87198755

GI number: 87198755

Start: 773446

End: 774426

Strand: Reverse

Name: lipA [H]

Synonym: Saro_0731

Alternate gene names: 87198755

Gene position: 774426-773446 (Counterclockwise)

Preceding gene: 87198762

Following gene: 87198754

Centisome position: 21.74

GC content: 66.56

Gene sequence:

>981_bases
ATGGCGACGATCATGAGCCGGCCCATCCGGCACATAAGACACATCCACGCCTTTCTGCGCGGCCAGGGGCGGGGCTTTGC
CGGTTGGGGGCGCAAGGCCTCGGGCCGCAGGGCAAGCCTGCTCGGACGCCTTCTCGGCAGGCCCTGCGTCCTCATCGAGG
ACGGCTTCCTGCGTTCGGCCGGACGGCACGCCCCGCCGATCTCGCTGATCGTCGACGATACCGGTGTGTATTACGATGCC
TCGGTGCCTTCGCTCGTAGAGCACCACATCAGCCGACCGATTTCCTCGCGCCAGGCAGAACGCGCCCGTCGCATCATCGC
CGCCTGGCAGGCCGGCGGACTTTCGAAGTACAACGACCGGACAAACCTGCAGCGTCCGTTGCCGGACCATTTCATTCTGG
TGGCCGACCAGACCGCAGGCGATCTCTCCATTCGCCACGGCGGGGCCGGGGAAGCAGAGTTCGGGGCGATGCTACGCGCT
GCCCTGCGCGAAAATCCCGGACGCCCCGTCATCGTGAAGACTCATCCGGACGTATCGCAGGCAGGGCGCAGCGGCCATTT
TGGCCCCGGCAGCCAGTACGCCGAACTAATGGAGAACCCGCAAGTCATTGCGGTAACCGAAGCCTGTGATCCTGTTCCGC
TGCTCCAGCGTTCGGTCGCGGTCTATGCCGTCACCTCGCAGCTTGGCTTTGAAGCGCTGCTATGGGGCAAGCCGGTGCGG
TGCTTCGGCATGCCCTTCTATGCTGGATGGGGCCTGACCCACGACGAACTTCCCCCGCCCCGGCGCCGCCGGCCGGTCTC
GCTCGAGCAACTCGTTTACGGAGCGCTGGTCGGGGCGCCGCGATACGTCGATCCCTCCACGGGGGACAAGTGGGAGATCG
AGGACGCCATGACGCATCTCGCGAACTGGAGCGCCTCCCACAACGACACCGCCGCCGCGATTCCCGCTCCGGTCGGTGCC
CGCCACGCTCTGACGGGCTAG

Upstream 100 bases:

>100_bases
CATCCCGCCCCCGCAACGCAAGCAAACTGCATCCAAGAAAGGTCCGGGACCGAGGTGCTTCCCGATGACCTGTCACCCCG
GCCCGGCATAACCTGTCACG

Downstream 100 bases:

>100_bases
CGCATGGGGCTGCCGACCACCGATCTCTATTTCCGGAATGCGTGCGCCGACTGGCTACACCGCCCCTGGAGGCGCGGCCC
GGTCCGCCGGATCGGTTCCA

Product: capsule polysaccharide biosynthesis

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MATIMSRPIRHIRHIHAFLRGQGRGFAGWGRKASGRRASLLGRLLGRPCVLIEDGFLRSAGRHAPPISLIVDDTGVYYDA
SVPSLVEHHISRPISSRQAERARRIIAAWQAGGLSKYNDRTNLQRPLPDHFILVADQTAGDLSIRHGGAGEAEFGAMLRA
ALRENPGRPVIVKTHPDVSQAGRSGHFGPGSQYAELMENPQVIAVTEACDPVPLLQRSVAVYAVTSQLGFEALLWGKPVR
CFGMPFYAGWGLTHDELPPPRRRRPVSLEQLVYGALVGAPRYVDPSTGDKWEIEDAMTHLANWSASHNDTAAAIPAPVGA
RHALTG

Sequences:

>Translated_326_residues
MATIMSRPIRHIRHIHAFLRGQGRGFAGWGRKASGRRASLLGRLLGRPCVLIEDGFLRSAGRHAPPISLIVDDTGVYYDA
SVPSLVEHHISRPISSRQAERARRIIAAWQAGGLSKYNDRTNLQRPLPDHFILVADQTAGDLSIRHGGAGEAEFGAMLRA
ALRENPGRPVIVKTHPDVSQAGRSGHFGPGSQYAELMENPQVIAVTEACDPVPLLQRSVAVYAVTSQLGFEALLWGKPVR
CFGMPFYAGWGLTHDELPPPRRRRPVSLEQLVYGALVGAPRYVDPSTGDKWEIEDAMTHLANWSASHNDTAAAIPAPVGA
RHALTG
>Mature_325_residues
ATIMSRPIRHIRHIHAFLRGQGRGFAGWGRKASGRRASLLGRLLGRPCVLIEDGFLRSAGRHAPPISLIVDDTGVYYDAS
VPSLVEHHISRPISSRQAERARRIIAAWQAGGLSKYNDRTNLQRPLPDHFILVADQTAGDLSIRHGGAGEAEFGAMLRAA
LRENPGRPVIVKTHPDVSQAGRSGHFGPGSQYAELMENPQVIAVTEACDPVPLLQRSVAVYAVTSQLGFEALLWGKPVRC
FGMPFYAGWGLTHDELPPPRRRRPVSLEQLVYGALVGAPRYVDPSTGDKWEIEDAMTHLANWSASHNDTAAAIPAPVGAR
HALTG

Specific function: Involved in the phospholipid modification of the capsular polysaccharide, a strong requirement for its translocation to the cell surface [H]

COG id: COG3563

COG function: function code M; Capsule polysaccharide export protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007833 [H]

Pfam domain/function: PF05159 Capsule_synth [H]

EC number: NA

Molecular weight: Translated: 35461; Mature: 35330

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATIMSRPIRHIRHIHAFLRGQGRGFAGWGRKASGRRASLLGRLLGRPCVLIEDGFLRSA
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCHHHCC
GRHAPPISLIVDDTGVYYDASVPSLVEHHISRPISSRQAERARRIIAAWQAGGLSKYNDR
CCCCCCEEEEEECCCEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
TNLQRPLPDHFILVADQTAGDLSIRHGGAGEAEFGAMLRAALRENPGRPVIVKTHPDVSQ
CCCCCCCCCCEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHH
AGRSGHFGPGSQYAELMENPQVIAVTEACDPVPLLQRSVAVYAVTSQLGFEALLWGKPVR
CCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHCEEEEEEHHHHCCEEHHCCCCCC
CFGMPFYAGWGLTHDELPPPRRRRPVSLEQLVYGALVGAPRYVDPSTGDKWEIEDAMTHL
EECCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHH
ANWSASHNDTAAAIPAPVGARHALTG
HCCCCCCCCCCEECCCCCCCCCCCCC
>Mature Secondary Structure 
ATIMSRPIRHIRHIHAFLRGQGRGFAGWGRKASGRRASLLGRLLGRPCVLIEDGFLRSA
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCHHHCC
GRHAPPISLIVDDTGVYYDASVPSLVEHHISRPISSRQAERARRIIAAWQAGGLSKYNDR
CCCCCCEEEEEECCCEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
TNLQRPLPDHFILVADQTAGDLSIRHGGAGEAEFGAMLRAALRENPGRPVIVKTHPDVSQ
CCCCCCCCCCEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHH
AGRSGHFGPGSQYAELMENPQVIAVTEACDPVPLLQRSVAVYAVTSQLGFEALLWGKPVR
CCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHCEEEEEEHHHHCCEEHHCCCCCC
CFGMPFYAGWGLTHDELPPPRRRRPVSLEQLVYGALVGAPRYVDPSTGDKWEIEDAMTHL
EECCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHH
ANWSASHNDTAAAIPAPVGARHALTG
HCCCCCCCCCCEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]